RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 ZNF853P0CG23 659 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 SPECC1Q5M775 1068 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 TSNAXIP1Q2TAA8 658 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 CEP135Q66GS9 1140 aa18.02■□□□□ 0.47
UBR5-207ENST00000520539 CKAP4Q07065 602 aaKnown RBP18.01■□□□□ 0.47
UBR5-207ENST00000520539 NUP62CLQ9H1M0 184 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 NOL7Q9UMY1 257 aaKnown RBP18.01■□□□□ 0.47
UBR5-207ENST00000520539 WASF1Q92558 559 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 HSF2BPO75031 334 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 KIF5AQ12840 1032 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 CCDC38Q502W7 563 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 RASSF4Q9H2L5 321 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 CCDC155Q8N6L0 562 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 LMNTD2Q8IXW0 634 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 CACNA2D3Q8IZS8 1091 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 PPP1R14CQ8TAE6 165 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 ZMYND15Q9H091 742 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 RASAL2Q9UJF2 1139 aa18.01■□□□□ 0.47
UBR5-207ENST00000520539 EBAG9O00559 213 aa18■□□□□ 0.47
UBR5-207ENST00000520539 CBX1P83916 185 aa18■□□□□ 0.47
UBR5-207ENST00000520539 SRRTQ9BXP5 876 aaKnown RBP18■□□□□ 0.47
UBR5-207ENST00000520539 VCXQ9H320 206 aa18■□□□□ 0.47
UBR5-207ENST00000520539 ARFGAP3Q9NP61 516 aa18■□□□□ 0.47
UBR5-207ENST00000520539 HOMER2Q9NSB8 354 aa18■□□□□ 0.47
UBR5-207ENST00000520539 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
UBR5-207ENST00000520539 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
UBR5-207ENST00000520539 CCDC57Q2TAC2 916 aa18■□□□□ 0.47
UBR5-207ENST00000520539 C1orf141Q5JVX7 400 aa18■□□□□ 0.47
UBR5-207ENST00000520539 FKBP15Q5T1M5 1219 aa18■□□□□ 0.47
UBR5-207ENST00000520539 IQCGQ9H095 443 aaKnown RBP18■□□□□ 0.47
UBR5-207ENST00000520539 OPA1O60313 960 aa18■□□□□ 0.47
UBR5-207ENST00000520539 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18■□□□□ 0.474e-15■■■■■ 51
UBR5-207ENST00000520539 GOPCQ9HD26 462 aa18■□□□□ 0.47
UBR5-207ENST00000520539 B4GALNT4Q76KP1 1039 aa18■□□□□ 0.47
UBR5-207ENST00000520539 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
UBR5-207ENST00000520539 CTAGE5O15320 804 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 ZNF365Q70YC5 407 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 IFI16Q16666 785 aaKnown RBP17.99■□□□□ 0.47
UBR5-207ENST00000520539 FAM177A1Q8N128 213 aaPredicted RBP17.99■□□□□ 0.47
UBR5-207ENST00000520539 CCDC150Q8NCX0 1101 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 FMNL3Q8IVF7 1028 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 KLHL10Q6JEL2 608 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 GBP7Q8N8V2 638 aaPredicted RBP17.99■□□□□ 0.47
UBR5-207ENST00000520539 LACTBP83111 547 aaPredicted RBP17.99■□□□□ 0.47
UBR5-207ENST00000520539 LRRC45Q96CN5 670 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 TBC1D2BQ9UPU7 963 aa17.99■□□□□ 0.47
UBR5-207ENST00000520539 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 BCL11BQ9C0K0 894 aaPredicted RBP17.98■□□□□ 0.47
UBR5-207ENST00000520539 ATP11AP98196 1134 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 POTEDQ86YR6 584 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 C10orf67Q8IYJ2 551 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 A0A1B0GUL7 405 aa17.98■□□□□ 0.47
UBR5-207ENST00000520539 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
UBR5-207ENST00000520539 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 CCDC7Q96M83 1385 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 ALDH3A1P30838 453 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 MYO10Q9HD67 2058 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 TRIM35Q9UPQ4 493 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 CFAP100Q494V2 611 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 SPATA32Q96LK8 384 aa17.97■□□□□ 0.47
UBR5-207ENST00000520539 ZHX1Q9UKY1 873 aaPredicted RBP17.97■□□□□ 0.47
UBR5-207ENST00000520539 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
UBR5-207ENST00000520539 CEP57Q86XR8 500 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 GBP1P32455 592 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 NAA25Q14CX7 972 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 CCDC144AA2RUR9 1427 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 SOX12O15370 315 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 MAP7Q14244 749 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 MAP7D1Q3KQU3 841 aa17.96■□□□□ 0.47
UBR5-207ENST00000520539 SLU7O95391 586 aaKnown RBP17.96■□□□□ 0.47
UBR5-207ENST00000520539 PPP6R1Q9UPN7 881 aa17.96■□□□□ 0.46
UBR5-207ENST00000520539 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 KIF20AO95235 890 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 DHX37Q8IY37 1157 aaKnown RBP17.95■□□□□ 0.46
UBR5-207ENST00000520539 STMN2Q93045 179 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 CRBNQ96SW2 442 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 CEP128Q6ZU80 1094 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 SSX2IPQ9Y2D8 614 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 CYP46A1Q9Y6A2 500 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.95■□□□□ 0.461e-7■■■□□ 17.6
UBR5-207ENST00000520539 PAK3O75914 559 aaPredicted RBP17.95■□□□□ 0.46
UBR5-207ENST00000520539 GMNNO75496 209 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 CCDC18Q5T9S5 1454 aa17.95■□□□□ 0.46
UBR5-207ENST00000520539 ABCC9O60706 1549 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 CCDC178Q5BJE1 867 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 WRNQ14191 1432 aaPredicted RBP eCLIP17.94■□□□□ 0.46
UBR5-207ENST00000520539 PRPHP41219 470 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 LARP1Q6PKG0 1096 aaKnown RBP17.94■□□□□ 0.46
UBR5-207ENST00000520539 CLIP2Q9UDT6 1046 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 MAP3K7CLP57077 242 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 PHLDB2Q86SQ0 1253 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 MXRA7P84157 204 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 MAATS1Q7Z4T9 603 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 AMPHP49418 695 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 CFAP58Q5T655 872 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 A0A1W2PRG0 241 aa17.94■□□□□ 0.46
UBR5-207ENST00000520539 YEATS4O95619 227 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1830.7 ms