RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 AXIN2Q9Y2T1 843 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
CTNNA1-221ENST00000520339 TTC21AQ8NDW8 1320 aa13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 NRKQ7Z2Y5 1582 aa13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 HAX1O00165 279 aa13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 KCNH5Q8NCM2 988 aa13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 ARHGEF1Q92888 912 aaKnown RBP13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
CTNNA1-221ENST00000520339 TRPM1Q7Z4N2 1603 aa13.15□□□□□ -0.3
CTNNA1-221ENST00000520339 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-221ENST00000520339 APBA3O96018 575 aa13.15□□□□□ -0.3
CTNNA1-221ENST00000520339 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-221ENST00000520339 CRB1P82279 1406 aa13.14□□□□□ -0.31
CTNNA1-221ENST00000520339 SLIT3O75094 1523 aa13.14□□□□□ -0.31
CTNNA1-221ENST00000520339 TOM1L2Q6ZVM7 507 aa13.14□□□□□ -0.31
CTNNA1-221ENST00000520339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.312e-8■□□□□ 8.3
CTNNA1-221ENST00000520339 KTN1Q86UP2 1357 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 TONSLQ96HA7 1378 aa13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 SLC12A5Q9H2X9 1139 aa13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
CTNNA1-221ENST00000520339 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 QRICH2Q9H0J4 1663 aa13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 C11orf95C9JLR9 678 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 R3HDM1Q15032 1099 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 TMC1Q8TDI8 760 aa13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 CARD10Q9BWT7 1032 aa13.12□□□□□ -0.31
CTNNA1-221ENST00000520339 USP31Q70CQ4 1352 aa13.11□□□□□ -0.31
CTNNA1-221ENST00000520339 TRIM26Q12899 539 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-221ENST00000520339 TRIM35Q9UPQ4 493 aa13.11□□□□□ -0.31
CTNNA1-221ENST00000520339 PARD3Q8TEW0 1356 aa13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 DDB1Q16531 1140 aa13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 NME9Q86XW9 330 aa13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 TESK2Q96S53 571 aa13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 CRISPLD2Q9H0B8 497 aa13.1□□□□□ -0.31
CTNNA1-221ENST00000520339 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
CTNNA1-221ENST00000520339 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
CTNNA1-221ENST00000520339 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
CTNNA1-221ENST00000520339 CD163L1Q9NR16 1453 aa13.09□□□□□ -0.31
CTNNA1-221ENST00000520339 ST20-MTHFSA0A0A6YYL1 179 aa13.08□□□□□ -0.32
CTNNA1-221ENST00000520339 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-221ENST00000520339 EVX2Q03828 476 aa13.08□□□□□ -0.32
CTNNA1-221ENST00000520339 MFSD10Q14728 455 aa13.08□□□□□ -0.32
CTNNA1-221ENST00000520339 MARCH10Q8NA82 808 aaPredicted RBP13.08□□□□□ -0.32
CTNNA1-221ENST00000520339 TERF2IPQ9NYB0 399 aa13.07□□□□□ -0.32
CTNNA1-221ENST00000520339 PIK3C2AO00443 1686 aa13.06□□□□□ -0.32
CTNNA1-221ENST00000520339 PTF1AQ7RTS3 328 aa13.06□□□□□ -0.32
CTNNA1-221ENST00000520339 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 OVOS2A0A0J9YW53 1432 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 OVOS2Q6IE36 1432 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 NFAT5O94916 1531 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 EXOC5O00471 708 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 PLSCR1O15162 318 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 NBPF14Q5TI25 921 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 BCL9O00512 1426 aa13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
CTNNA1-221ENST00000520339 CLCN6P51797 869 aa13.04□□□□□ -0.32
CTNNA1-221ENST00000520339 ERBB3P21860 1342 aa13.04□□□□□ -0.32
CTNNA1-221ENST00000520339 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
CTNNA1-221ENST00000520339 COL18A1P39060 1754 aa13.04□□□□□ -0.32
CTNNA1-221ENST00000520339 RGPD1P0DJD0 1748 aa13.03□□□□□ -0.32
CTNNA1-221ENST00000520339 SEMA3EO15041 775 aa13.03□□□□□ -0.32
CTNNA1-221ENST00000520339 DPY19L2Q6NUT2 758 aa13.03□□□□□ -0.32
CTNNA1-221ENST00000520339 NLRP2Q9NX02 1062 aa13.03□□□□□ -0.32
CTNNA1-221ENST00000520339 ANKRD24Q8TF21 1146 aa13.02□□□□□ -0.33
CTNNA1-221ENST00000520339 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.33
CTNNA1-221ENST00000520339 IP6K1Q92551 441 aa13.01□□□□□ -0.33
CTNNA1-221ENST00000520339 TNS1Q9HBL0 1735 aaKnown RBP13.01□□□□□ -0.33
CTNNA1-221ENST00000520339 IL2RBP14784 551 aa13□□□□□ -0.33
CTNNA1-221ENST00000520339 ATN1P54259 1190 aaPredicted RBP13□□□□□ -0.33
CTNNA1-221ENST00000520339 PARP4Q9UKK3 1724 aaKnown RBP12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 LRP5O75197 1615 aa12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 ABCC6O95255 1503 aa12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 KCNQ2O43526 872 aa12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 COG3Q96JB2 828 aa12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
CTNNA1-221ENST00000520339 TESPA1A2RU30 521 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-221ENST00000520339 FBLN1P23142 703 aa12.98□□□□□ -0.33
CTNNA1-221ENST00000520339 TMF1P82094 1093 aa12.98□□□□□ -0.33
CTNNA1-221ENST00000520339 AKAP12Q02952 1782 aa12.98□□□□□ -0.33
CTNNA1-221ENST00000520339 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
CTNNA1-221ENST00000520339 USP47Q96K76 1375 aa12.97□□□□□ -0.33
CTNNA1-221ENST00000520339 PEAK1Q9H792 1746 aa12.97□□□□□ -0.33
CTNNA1-221ENST00000520339 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
CTNNA1-221ENST00000520339 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
CTNNA1-221ENST00000520339 TNS2Q63HR2 1409 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 LRRC37A3O60309 1634 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 FYB1O15117 783 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 ATMINO43313 823 aaPredicted RBP12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 CAMK2BQ13554 666 aa12.96□□□□□ -0.33
CTNNA1-221ENST00000520339 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms