RNA–Protein interactions for RNA: ENST00000520170.1

HDAC2-207, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-207ENST00000520170 CHD4Q14839 1912 aa28.07■■■□□ 2.08
HDAC2-207ENST00000520170 FYB1O15117 783 aa28.05■■■□□ 2.08
HDAC2-207ENST00000520170 MEGF6O75095 1541 aa28.05■■■□□ 2.08
HDAC2-207ENST00000520170 TMF1P82094 1093 aa28.05■■■□□ 2.08
HDAC2-207ENST00000520170 QSER1Q2KHR3 1735 aa28.05■■■□□ 2.08
HDAC2-207ENST00000520170 TUBGCP6Q96RT7 1819 aa28.04■■■□□ 2.08
HDAC2-207ENST00000520170 NBPF6Q5VWK0 638 aa28.03■■■□□ 2.08
HDAC2-207ENST00000520170 USHBP1Q8N6Y0 703 aa28.03■■■□□ 2.08
HDAC2-207ENST00000520170 NBPF4Q96M43 638 aa28.03■■■□□ 2.08
HDAC2-207ENST00000520170 TFCP2L1Q9NZI6 479 aa28.03■■■□□ 2.08
HDAC2-207ENST00000520170 RTL1A6NKG5 1358 aa28.02■■■□□ 2.08
HDAC2-207ENST00000520170 LY75O60449 1722 aa28.02■■■□□ 2.08
HDAC2-207ENST00000520170 SLC16A10Q8TF71 515 aa28.02■■■□□ 2.08
HDAC2-207ENST00000520170 USP47Q96K76 1375 aa28.01■■■□□ 2.07
HDAC2-207ENST00000520170 PNPLA7Q6ZV29 1317 aa28.01■■■□□ 2.07
HDAC2-207ENST00000520170 NSD2O96028 1365 aa28■■■□□ 2.07
HDAC2-207ENST00000520170 KLHL34Q8N239 644 aa28■■■□□ 2.07
HDAC2-207ENST00000520170 ZNF784Q8NCA9 323 aaPredicted RBP27.99■■■□□ 2.07
HDAC2-207ENST00000520170 RAPGEF4Q8WZA2 1011 aa27.99■■■□□ 2.07
HDAC2-207ENST00000520170 KIF20BQ96Q89 1820 aa27.99■■■□□ 2.07
HDAC2-207ENST00000520170 MAP3K5Q99683 1374 aa27.99■■■□□ 2.07
HDAC2-207ENST00000520170 POLD1P28340 1107 aa27.98■■■□□ 2.07
HDAC2-207ENST00000520170 SMG6Q86US8 1419 aaKnown RBP27.98■■■□□ 2.07
HDAC2-207ENST00000520170 CCNL1Q9UK58 526 aaPredicted RBP27.97■■■□□ 2.07
HDAC2-207ENST00000520170 HSP90AB2PQ58FF8 381 aa27.96■■■□□ 2.07
HDAC2-207ENST00000520170 CGNL1Q0VF96 1302 aa27.95■■■□□ 2.07
HDAC2-207ENST00000520170 GPR162Q16538 588 aa27.95■■■□□ 2.06
HDAC2-207ENST00000520170 COL24A1Q17RW2 1714 aa27.95■■■□□ 2.06
HDAC2-207ENST00000520170 TATP17735 454 aaPredicted RBP27.94■■■□□ 2.06
HDAC2-207ENST00000520170 CDCA8Q53HL2 280 aa27.93■■■□□ 2.06
HDAC2-207ENST00000520170 INSRP06213 1382 aa27.92■■■□□ 2.06
HDAC2-207ENST00000520170 MSH5O43196 834 aa27.92■■■□□ 2.06
HDAC2-207ENST00000520170 TRIM26Q12899 539 aaPredicted RBP27.9■■■□□ 2.06
HDAC2-207ENST00000520170 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
HDAC2-207ENST00000520170 FLT4P35916 1363 aa27.89■■■□□ 2.06
HDAC2-207ENST00000520170 GOLGB1Q14789 3259 aaKnown RBP27.89■■■□□ 2.06
HDAC2-207ENST00000520170 CARD14Q9BXL6 1004 aa27.88■■■□□ 2.05
HDAC2-207ENST00000520170 PCDH11XQ9BZA7 1347 aa27.88■■■□□ 2.05
HDAC2-207ENST00000520170 PCDH11YQ9BZA8 1340 aa27.88■■■□□ 2.05
HDAC2-207ENST00000520170 COL23A1Q86Y22 540 aaPredicted RBP27.87■■■□□ 2.05
HDAC2-207ENST00000520170 NLGN2Q8NFZ4 835 aa27.86■■■□□ 2.05
HDAC2-207ENST00000520170 KIF24Q5T7B8 1368 aa27.86■■■□□ 2.05
HDAC2-207ENST00000520170 MPRIPQ6WCQ1 1025 aa27.85■■■□□ 2.05
HDAC2-207ENST00000520170 EMILIN1Q9Y6C2 1016 aa27.85■■■□□ 2.05
HDAC2-207ENST00000520170 C5P01031 1676 aa27.84■■■□□ 2.05
HDAC2-207ENST00000520170 ITGB4P16144 1822 aa27.84■■■□□ 2.05
HDAC2-207ENST00000520170 PPM1GO15355 546 aaPredicted RBP27.84■■■□□ 2.05
HDAC2-207ENST00000520170 NSD3Q9BZ95 1437 aa27.84■■■□□ 2.05
HDAC2-207ENST00000520170 TAF1LQ8IZX4 1826 aa27.83■■■□□ 2.05
HDAC2-207ENST00000520170 CYP27B1O15528 508 aa27.83■■■□□ 2.05
HDAC2-207ENST00000520170 MSL1Q68DK7 614 aa27.82■■■□□ 2.04
HDAC2-207ENST00000520170 MAP2P11137 1827 aaKnown RBP27.81■■■□□ 2.04
HDAC2-207ENST00000520170 PALLDQ8WX93 1383 aa27.81■■■□□ 2.04
HDAC2-207ENST00000520170 TOGARAM1Q9Y4F4 1720 aa27.79■■■□□ 2.04
HDAC2-207ENST00000520170 PKD1L3Q7Z443 1732 aa27.78■■■□□ 2.04
HDAC2-207ENST00000520170 HMGB2P26583 209 aaKnown RBP27.76■■■□□ 2.03
HDAC2-207ENST00000520170 SMARCC1Q92922 1105 aaPredicted RBP27.75■■■□□ 2.03
HDAC2-207ENST00000520170 FLAD1Q8NFF5 587 aa27.74■■■□□ 2.03
HDAC2-207ENST00000520170 SPG7Q9UQ90 795 aa27.74■■■□□ 2.03
HDAC2-207ENST00000520170 ANKRD26Q9UPS8 1709 aa27.74■■■□□ 2.03
HDAC2-207ENST00000520170 YBX3P16989 372 aaKnown RBP eCLIP27.73■■■□□ 2.03
HDAC2-207ENST00000520170 PIGBQ92521 554 aa27.73■■■□□ 2.03
HDAC2-207ENST00000520170 POLR3GLQ9BT43 218 aa27.73■■■□□ 2.03
HDAC2-207ENST00000520170 C4BP0C0L5 1744 aa27.72■■■□□ 2.03
HDAC2-207ENST00000520170 WASHC2AQ641Q2 1341 aa27.72■■■□□ 2.03
HDAC2-207ENST00000520170 C1QTNF8P60827 252 aa27.72■■■□□ 2.03
HDAC2-207ENST00000520170 AK7Q96M32 723 aa27.72■■■□□ 2.03
HDAC2-207ENST00000520170 NCAPD2Q15021 1401 aa27.71■■■□□ 2.03
HDAC2-207ENST00000520170 EYA1Q99502 592 aa27.71■■■□□ 2.03
HDAC2-207ENST00000520170 GRIN3BO60391 1043 aa27.7■■■□□ 2.02
HDAC2-207ENST00000520170 NKX1-1Q15270 411 aaPredicted RBP27.7■■■□□ 2.02
HDAC2-207ENST00000520170 SENP3-EIF4A1A0A087X0R7 540 aa27.69■■■□□ 2.02
HDAC2-207ENST00000520170 SMIM5Q71RC9 77 aa27.69■■■□□ 2.02
HDAC2-207ENST00000520170 TIMELESSQ9UNS1 1208 aa27.69■■■□□ 2.02
HDAC2-207ENST00000520170 UBR3Q6ZT12 1888 aa27.69■■■□□ 2.02
HDAC2-207ENST00000520170 PHF14O94880 888 aa27.68■■■□□ 2.02
HDAC2-207ENST00000520170 AMIGO3Q86WK7 504 aa27.68■■■□□ 2.02
HDAC2-207ENST00000520170 POLKQ9UBT6 870 aa27.68■■■□□ 2.02
HDAC2-207ENST00000520170 TNNT2P45379 298 aaPredicted RBP27.67■■■□□ 2.02
HDAC2-207ENST00000520170 CD2APQ9Y5K6 639 aa27.67■■■□□ 2.02
HDAC2-207ENST00000520170 TMOD3Q9NYL9 352 aa27.66■■■□□ 2.02
HDAC2-207ENST00000520170 GIGYF1O75420 1035 aaPredicted RBP27.65■■■□□ 2.02
HDAC2-207ENST00000520170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.65■■■□□ 2.026e-10■■■■□ 22.5
HDAC2-207ENST00000520170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.64■■■□□ 2.02
HDAC2-207ENST00000520170 LOC102724428A0A0B4J2F2 783 aa27.64■■■□□ 2.02
HDAC2-207ENST00000520170 SIK1P57059 783 aa27.64■■■□□ 2.02
HDAC2-207ENST00000520170 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
HDAC2-207ENST00000520170 IFNL2Q8IZJ0 200 aa27.63■■■□□ 2.01
HDAC2-207ENST00000520170 LINC00116Q8NCU8 138 aa27.63■■■□□ 2.01
HDAC2-207ENST00000520170 ASAP1Q9ULH1 1129 aa27.63■■■□□ 2.01
HDAC2-207ENST00000520170 PHKG2P15735 406 aa27.62■■■□□ 2.01
HDAC2-207ENST00000520170 EIF4A2Q14240 407 aaKnown RBP27.61■■■□□ 2.01
HDAC2-207ENST00000520170 SSFA2P28290 1259 aa27.59■■■□□ 2.01
HDAC2-207ENST00000520170 ATP6V1AP38606 617 aa27.58■■■□□ 2.01
HDAC2-207ENST00000520170 ITPK1Q13572 414 aa27.58■■■□□ 2.01
HDAC2-207ENST00000520170 GNPATO15228 680 aa27.57■■■□□ 2
HDAC2-207ENST00000520170 ATG3Q9NT62 314 aa27.57■■■□□ 2
HDAC2-207ENST00000520170 WWC3Q9ULE0 1092 aa27.56■■■□□ 2
HDAC2-207ENST00000520170 CLSPNQ9HAW4 1339 aa27.56■■■□□ 2
HDAC2-207ENST00000520170 IGSF1Q8N6C5 1336 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms