RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
CTNNA1-219ENST00000520158 KCNQ2O43526 872 aa7.98□□□□□ -1.13
CTNNA1-219ENST00000520158 CSB-PGBD3P0DP91 1061 aa7.98□□□□□ -1.13
CTNNA1-219ENST00000520158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.98□□□□□ -1.131e-6■■□□□ 12.4
CTNNA1-219ENST00000520158 SPON1Q9HCB6 807 aa7.98□□□□□ -1.13
CTNNA1-219ENST00000520158 TIMELESSQ9UNS1 1208 aa7.98□□□□□ -1.13
CTNNA1-219ENST00000520158 CASZ1Q86V15 1759 aa7.97□□□□□ -1.13
CTNNA1-219ENST00000520158 IL2RBP14784 551 aa7.97□□□□□ -1.13
CTNNA1-219ENST00000520158 TXNRD1Q16881 649 aa7.97□□□□□ -1.13
CTNNA1-219ENST00000520158 TMC1Q8TDI8 760 aa7.97□□□□□ -1.13
CTNNA1-219ENST00000520158 SOX12O15370 315 aa7.96□□□□□ -1.14
CTNNA1-219ENST00000520158 TRIM26Q12899 539 aaPredicted RBP7.96□□□□□ -1.14
CTNNA1-219ENST00000520158 ANKRD24Q8TF21 1146 aa7.96□□□□□ -1.14
CTNNA1-219ENST00000520158 NHSQ6T4R5 1651 aa7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 FAM208AQ9UK61 1670 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 SLC15A2Q16348 729 aa7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 ANO8Q9HCE9 1232 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 NLRP2Q9NX02 1062 aa7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 ANKRD36BQ8N2N9 1353 aa7.95□□□□□ -1.14
CTNNA1-219ENST00000520158 FYB1O15117 783 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 HOXC9P31274 260 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 PTGER2P43116 358 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 TMF1P82094 1093 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 COG3Q96JB2 828 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 SGIP1Q9BQI5 828 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 MAP3K19Q56UN5 1328 aa7.94□□□□□ -1.14
CTNNA1-219ENST00000520158 PAPPAQ13219 1627 aa7.93□□□□□ -1.14
CTNNA1-219ENST00000520158 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
CTNNA1-219ENST00000520158 STK32BQ9NY57 414 aa7.93□□□□□ -1.14
CTNNA1-219ENST00000520158 RTL1A6NKG5 1358 aa7.93□□□□□ -1.14
CTNNA1-219ENST00000520158 KIF24Q5T7B8 1368 aa7.93□□□□□ -1.14
CTNNA1-219ENST00000520158 BTAF1O14981 1849 aa7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 ATXN8OSP0DMR3 200 aa7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 SLC27A3Q5K4L6 730 aa7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 PDGFDQ9GZP0 370 aaPredicted RBP7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 CGNL1Q0VF96 1302 aa7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 CLSPNQ9HAW4 1339 aa7.92□□□□□ -1.14
CTNNA1-219ENST00000520158 HOMEZQ8IX15 550 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 MTFR1LQ9H019 292 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 LRRC4BQ9NT99 713 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 PPP1R1BQ9UD71 204 aaPredicted RBP7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 USP47Q96K76 1375 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 COL24A1Q17RW2 1714 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 QSER1Q2KHR3 1735 aa7.91□□□□□ -1.14
CTNNA1-219ENST00000520158 INSRP06213 1382 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 MAP3K5Q99683 1374 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 AMPHP49418 695 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 NBPF6Q5VWK0 638 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 KLHL34Q8N239 644 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 SLC16A10Q8TF71 515 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 ACSBG1Q96GR2 724 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 NBPF4Q96M43 638 aa7.9□□□□□ -1.14
CTNNA1-219ENST00000520158 RGPD2P0DJD1 1756 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 NSD2O96028 1365 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 POTEMA6NI47 508 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 ZBTB7AO95365 584 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 FBLN1P23142 703 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 HMGB2P26583 209 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 ZCRB1Q8TBF4 217 aaKnown RBP7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 CARD14Q9BXL6 1004 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 KAT6BQ8WYB5 2073 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 LY75O60449 1722 aa7.89□□□□□ -1.15
CTNNA1-219ENST00000520158 NCAPD2Q15021 1401 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 SPDYE2BA6NHP3 402 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 SPDYE6P0CI01 402 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 SPDYE2Q495Y8 402 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 SPDYE1Q8NFV5 336 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 DDX54Q8TDD1 881 aaKnown RBP7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 LTV1Q96GA3 475 aaPredicted RBP7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 SYT17Q9BSW7 474 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 MEGF6O75095 1541 aa7.88□□□□□ -1.15
CTNNA1-219ENST00000520158 FLT4P35916 1363 aa7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 MYOM1P52179 1685 aa7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 YY1P25490 414 aa7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 RRS1Q15050 365 aaKnown RBP7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 ZNF827Q17R98 1081 aa7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 FHDC1Q9C0D6 1143 aaPredicted RBP7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 KIF20BQ96Q89 1820 aa7.87□□□□□ -1.15
CTNNA1-219ENST00000520158 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 NKX1-1Q15270 411 aaPredicted RBP7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 HSP90AB2PQ58FF8 381 aa7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 RAPGEF4Q8WZA2 1011 aa7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.86□□□□□ -1.157e-9■□□□□ 10.5
CTNNA1-219ENST00000520158 DOT1LQ8TEK3 1739 aa7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
CTNNA1-219ENST00000520158 PLEKHG2Q9H7P9 1386 aa7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 PNPLA7Q6ZV29 1317 aa7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 TATP17735 454 aaPredicted RBP7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 OTUD5Q96G74 571 aa7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 CLEC11AQ9Y240 323 aa7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 ANKRD26Q9UPS8 1709 aa7.85□□□□□ -1.15
CTNNA1-219ENST00000520158 PCDH11XQ9BZA7 1347 aa7.84□□□□□ -1.15
CTNNA1-219ENST00000520158 PCDH11YQ9BZA8 1340 aa7.84□□□□□ -1.15
CTNNA1-219ENST00000520158 CYP27B1O15528 508 aa7.84□□□□□ -1.15
CTNNA1-219ENST00000520158 MAP2P11137 1827 aaKnown RBP7.84□□□□□ -1.15
CTNNA1-219ENST00000520158 TUBGCP6Q96RT7 1819 aa7.84□□□□□ -1.15
CTNNA1-219ENST00000520158 CHD4Q14839 1912 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms