RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 PUS7Q96PZ0 661 aaKnown RBP4.18□□□□□ -1.74
MCF2-208ENST00000519895 BEGAINQ9BUH8 593 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 BCL11BQ9C0K0 894 aaPredicted RBP4.18□□□□□ -1.74
MCF2-208ENST00000519895 ADAMTS13Q76LX8 1427 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 GPRASP1Q5JY77 1395 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 CDC42BPGQ6DT37 1551 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 COL18A1P39060 1754 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 TNFRSF10AO00220 468 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 OVOS2A0A0G2JMS6 1433 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 OVOS2A0A0J9YW53 1432 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 OVOS2Q6IE36 1432 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 ACAP1Q15027 740 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 MAMSTRQ6ZN01 415 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 PMFBP1Q8TBY8 1022 aa4.18□□□□□ -1.74
MCF2-208ENST00000519895 MKRN1Q9UHC7 482 aaKnown RBP4.18□□□□□ -1.74
MCF2-208ENST00000519895 EIF3AQ14152 1382 aaKnown RBP4.17□□□□□ -1.74
MCF2-208ENST00000519895 KCPQ6ZWJ8 1503 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 USP54Q70EL1 1684 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 PASKQ96RG2 1323 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 MPHOSPH9Q99550 1183 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 KIAA1551Q9HCM1 1747 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 TUBGCP6Q96RT7 1819 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 ABCC11Q96J66 1382 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 SBNO2Q9Y2G9 1366 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 PHRF1Q9P1Y6 1649 aaKnown RBP4.17□□□□□ -1.74
MCF2-208ENST00000519895 ADGRB1O14514 1584 aa4.17□□□□□ -1.74
MCF2-208ENST00000519895 VGFO15240 615 aaPredicted RBP4.16□□□□□ -1.74
MCF2-208ENST00000519895 MAP2K2P36507 400 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 C1QTNF1Q9BXJ1 281 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 KCNH6Q9H252 994 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 GTF3C3Q9Y5Q9 886 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 ANKARQ7Z5J8 1434 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 IDI1Q13907 227 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 ERMP1Q7Z2K6 904 aa4.16□□□□□ -1.74
MCF2-208ENST00000519895 WDR33Q9C0J8 1336 aaKnown RBP4.15□□□□□ -1.74
MCF2-208ENST00000519895 NHSQ6T4R5 1651 aa4.15□□□□□ -1.74
MCF2-208ENST00000519895 VEGFAP15692 232 aaPredicted RBP4.15□□□□□ -1.74
MCF2-208ENST00000519895 ECE1P42892 770 aa4.15□□□□□ -1.74
MCF2-208ENST00000519895 BRCA1P38398 1863 aaKnown RBP4.15□□□□□ -1.74
MCF2-208ENST00000519895 PROM2Q8N271 834 aa4.15□□□□□ -1.75
MCF2-208ENST00000519895 PRO3102Q9H379 93 aa4.15□□□□□ -1.75
MCF2-208ENST00000519895 ABCC6O95255 1503 aa4.15□□□□□ -1.75
MCF2-208ENST00000519895 HMGB2P26583 209 aaKnown RBP4.15□□□□□ -1.75
MCF2-208ENST00000519895 SLC26A8Q96RN1 970 aa4.15□□□□□ -1.75
MCF2-208ENST00000519895 CCDC9Q9Y3X0 531 aaKnown RBP4.15□□□□□ -1.75
MCF2-208ENST00000519895 SPATA31A1Q5TZJ5 1347 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 ITSN1Q15811 1721 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 SBF1O95248 1867 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 TMEM88BA6NKF7 163 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 HOMEZQ8IX15 550 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 KDM6AO15550 1401 aaPredicted RBP4.14□□□□□ -1.75
MCF2-208ENST00000519895 CRYBG1Q9Y4K1 1723 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 A0A0G2JS52 829 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 MYT1Q01538 1121 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 CHADLQ6NUI6 762 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 CDCA7Q9BWT1 371 aaPredicted RBP4.14□□□□□ -1.75
MCF2-208ENST00000519895 RRAGCQ9HB90 399 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 AKAP12Q02952 1782 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 SPATA31A3Q5VYP0 1347 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 WNK3Q9BYP7 1800 aa4.14□□□□□ -1.75
MCF2-208ENST00000519895 SLC4A2P04920 1241 aa4.13□□□□□ -1.75
MCF2-208ENST00000519895 ALYREFQ86V81 257 aaKnown RBP4.13□□□□□ -1.75
MCF2-208ENST00000519895 C14orf93Q9H972 538 aaKnown RBP4.13□□□□□ -1.75
MCF2-208ENST00000519895 SAGE1Q9NXZ1 904 aa4.13□□□□□ -1.75
MCF2-208ENST00000519895 THRAP3Q9Y2W1 955 aaKnown RBP4.13□□□□□ -1.75
MCF2-208ENST00000519895 MYCNP04198 464 aaPredicted RBP4.13□□□□□ -1.75
MCF2-208ENST00000519895 TXNRD1Q16881 649 aa4.13□□□□□ -1.75
MCF2-208ENST00000519895 CHIC2Q9UKJ5 165 aa4.13□□□□□ -1.75
MCF2-208ENST00000519895 LAMB2P55268 1798 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 ITGB8P26012 769 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 PDE3BQ13370 1112 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 DEFB115Q30KQ5 88 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 SBNO1A3KN83 1393 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 ARHGEF10O15013 1369 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 ADAMTSL1Q8N6G6 1762 aa4.12□□□□□ -1.75
MCF2-208ENST00000519895 TNS3Q68CZ2 1445 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 MRE11P49959 708 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 BRPF1P55201 1214 aaPredicted RBP4.11□□□□□ -1.75
MCF2-208ENST00000519895 RAPGEFL1Q9UHV5 662 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 TMEM265A0A087WTH1 108 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 INSRP06213 1382 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 CRB1P82279 1406 aa4.11□□□□□ -1.75
MCF2-208ENST00000519895 SCN4AP35499 1836 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 PRKAR2AP13861 404 aaKnown RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 POLA2Q14181 598 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 INTS3Q68E01 1043 aaKnown RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 FBXO3Q9UK99 471 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 TIAM2Q8IVF5 1701 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 IGSF1Q8N6C5 1336 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 CASP8AP2Q9UKL3 1982 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 CTU1Q7Z7A3 348 aaKnown RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 SPDYE1Q8NFV5 336 aaPredicted RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 BBXQ8WY36 941 aaPredicted RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 CFAP65Q6ZU64 1925 aaKnown RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 ST18O60284 1047 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 DDX17Q92841 729 aaKnown RBP4.1□□□□□ -1.75
MCF2-208ENST00000519895 HHIPL1Q96JK4 782 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 DCBLD2Q96PD2 775 aa4.1□□□□□ -1.75
MCF2-208ENST00000519895 FAM182BQ5T319 152 aa4.09□□□□□ -1.75
MCF2-208ENST00000519895 FAM109BQ6ICB4 259 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms