RNA–Protein interactions for RNA: ENST00000519860.3

ERGIC1-206, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 3 BASIC

Gene ERGIC1, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-206ENST00000519860 ZCRB1Q8TBF4 217 aaKnown RBP31.56■■■□□ 2.64
ERGIC1-206ENST00000519860 SYTL4Q96C24 671 aaPredicted RBP31.55■■■□□ 2.64
ERGIC1-206ENST00000519860 PPP1R1BQ9UD71 204 aaPredicted RBP31.55■■■□□ 2.64
ERGIC1-206ENST00000519860 CASZ1Q86V15 1759 aa31.55■■■□□ 2.64
ERGIC1-206ENST00000519860 PPM1GO15355 546 aaPredicted RBP31.54■■■□□ 2.64
ERGIC1-206ENST00000519860 SHANK3Q9BYB0 1731 aa31.53■■■□□ 2.64
ERGIC1-206ENST00000519860 SLC15A2Q16348 729 aa31.53■■■□□ 2.64
ERGIC1-206ENST00000519860 CGNL1Q0VF96 1302 aa31.52■■■□□ 2.64
ERGIC1-206ENST00000519860 ZBTB7AO95365 584 aa31.52■■■□□ 2.64
ERGIC1-206ENST00000519860 RAPGEF4Q8WZA2 1011 aa31.52■■■□□ 2.64
ERGIC1-206ENST00000519860 PRIM1P49642 420 aaKnown RBP31.51■■■□□ 2.63
ERGIC1-206ENST00000519860 DOT1LQ8TEK3 1739 aa31.5■■■□□ 2.63
ERGIC1-206ENST00000519860 KIF24Q5T7B8 1368 aa31.5■■■□□ 2.63
ERGIC1-206ENST00000519860 LRRC4BQ9NT99 713 aa31.48■■■□□ 2.63
ERGIC1-206ENST00000519860 TATP17735 454 aaPredicted RBP31.47■■■□□ 2.63
ERGIC1-206ENST00000519860 ATF5Q9Y2D1 282 aaPredicted RBP31.46■■■□□ 2.63
ERGIC1-206ENST00000519860 PAPPAQ13219 1627 aa31.46■■■□□ 2.63
ERGIC1-206ENST00000519860 TNNT2P45379 298 aaPredicted RBP31.45■■■□□ 2.63
ERGIC1-206ENST00000519860 NSD2O96028 1365 aa31.43■■■□□ 2.62
ERGIC1-206ENST00000519860 KCNQ4P56696 695 aa31.43■■■□□ 2.62
ERGIC1-206ENST00000519860 ZNF827Q17R98 1081 aa31.43■■■□□ 2.62
ERGIC1-206ENST00000519860 ANKRD26Q9UPS8 1709 aa31.41■■■□□ 2.62
ERGIC1-206ENST00000519860 PANK3Q9H999 370 aa31.41■■■□□ 2.62
ERGIC1-206ENST00000519860 POLKQ9UBT6 870 aa31.4■■■□□ 2.62
ERGIC1-206ENST00000519860 MAP2P11137 1827 aaKnown RBP31.4■■■□□ 2.62
ERGIC1-206ENST00000519860 PTGER2P43116 358 aa31.39■■■□□ 2.62
ERGIC1-206ENST00000519860 WASHC2AQ641Q2 1341 aa31.39■■■□□ 2.62
ERGIC1-206ENST00000519860 PCDH11XQ9BZA7 1347 aa31.39■■■□□ 2.62
ERGIC1-206ENST00000519860 PCDH11YQ9BZA8 1340 aa31.39■■■□□ 2.62
ERGIC1-206ENST00000519860 SLC27A3Q5K4L6 730 aa31.38■■■□□ 2.61
ERGIC1-206ENST00000519860 MTFR1LQ9H019 292 aa31.36■■■□□ 2.61
ERGIC1-206ENST00000519860 CYP27B1O15528 508 aa31.35■■■□□ 2.61
ERGIC1-206ENST00000519860 AKT1S1Q96B36 256 aa31.34■■■□□ 2.61
ERGIC1-206ENST00000519860 EYA1Q99502 592 aa31.34■■■□□ 2.61
ERGIC1-206ENST00000519860 NCAPD2Q15021 1401 aa31.32■■■□□ 2.61
ERGIC1-206ENST00000519860 CCNL1Q9UK58 526 aaPredicted RBP31.32■■■□□ 2.6
ERGIC1-206ENST00000519860 LY75O60449 1722 aa31.32■■■□□ 2.6
ERGIC1-206ENST00000519860 TFCP2L1Q9NZI6 479 aa31.3■■■□□ 2.6
ERGIC1-206ENST00000519860 PKD1L3Q7Z443 1732 aa31.29■■■□□ 2.6
ERGIC1-206ENST00000519860 EIF4A2Q14240 407 aaKnown RBP31.29■■■□□ 2.6
ERGIC1-206ENST00000519860 MPRIPQ6WCQ1 1025 aa31.29■■■□□ 2.6
ERGIC1-206ENST00000519860 SGIP1Q9BQI5 828 aa31.28■■■□□ 2.6
ERGIC1-206ENST00000519860 SPG7Q9UQ90 795 aa31.27■■■□□ 2.6
ERGIC1-206ENST00000519860 PNPLA7Q6ZV29 1317 aa31.26■■■□□ 2.6
ERGIC1-206ENST00000519860 TOGARAM1Q9Y4F4 1720 aa31.26■■■□□ 2.59
ERGIC1-206ENST00000519860 FHDC1Q9C0D6 1143 aaPredicted RBP31.25■■■□□ 2.59
ERGIC1-206ENST00000519860 TUBGCP6Q96RT7 1819 aa31.24■■■□□ 2.59
ERGIC1-206ENST00000519860 MORC1Q86VD1 984 aa31.24■■■□□ 2.59
ERGIC1-206ENST00000519860 DCAF8L1A6NGE4 600 aa31.23■■■□□ 2.59
ERGIC1-206ENST00000519860 PALLDQ8WX93 1383 aa31.22■■■□□ 2.59
ERGIC1-206ENST00000519860 KNSTRNQ9Y448 316 aa31.22■■■□□ 2.59
ERGIC1-206ENST00000519860 QSER1Q2KHR3 1735 aa31.21■■■□□ 2.59
ERGIC1-206ENST00000519860 ARXQ96QS3 562 aa31.21■■■□□ 2.59
ERGIC1-206ENST00000519860 KIF7Q2M1P5 1343 aa31.21■■■□□ 2.59
ERGIC1-206ENST00000519860 ITGB4P16144 1822 aa31.2■■■□□ 2.59
ERGIC1-206ENST00000519860 SYT17Q9BSW7 474 aa31.2■■■□□ 2.59
ERGIC1-206ENST00000519860 NKX1-1Q15270 411 aaPredicted RBP31.18■■■□□ 2.58
ERGIC1-206ENST00000519860 PIGBQ92521 554 aa31.18■■■□□ 2.58
ERGIC1-206ENST00000519860 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.18■■■□□ 2.58
ERGIC1-206ENST00000519860 MSH5O43196 834 aa31.17■■■□□ 2.58
ERGIC1-206ENST00000519860 SLC16A10Q8TF71 515 aa31.17■■■□□ 2.58
ERGIC1-206ENST00000519860 IGSF1Q8N6C5 1336 aa31.17■■■□□ 2.58
ERGIC1-206ENST00000519860 C5P01031 1676 aa31.16■■■□□ 2.58
ERGIC1-206ENST00000519860 PHKG2P15735 406 aa31.15■■■□□ 2.58
ERGIC1-206ENST00000519860 YY1P25490 414 aa31.14■■■□□ 2.58
ERGIC1-206ENST00000519860 IFNL2Q8IZJ0 200 aa31.14■■■□□ 2.58
ERGIC1-206ENST00000519860 SMARCC1Q92922 1105 aaPredicted RBP31.13■■■□□ 2.57
ERGIC1-206ENST00000519860 POLD1P28340 1107 aa31.12■■■□□ 2.57
ERGIC1-206ENST00000519860 COL23A1Q86Y22 540 aaPredicted RBP31.12■■■□□ 2.57
ERGIC1-206ENST00000519860 KLHL34Q8N239 644 aa31.12■■■□□ 2.57
ERGIC1-206ENST00000519860 TMOD3Q9NYL9 352 aa31.12■■■□□ 2.57
ERGIC1-206ENST00000519860 AMER1Q5JTC6 1135 aaPredicted RBP31.11■■■□□ 2.57
ERGIC1-206ENST00000519860 TAF1LQ8IZX4 1826 aa31.09■■■□□ 2.57
ERGIC1-206ENST00000519860 AEBP1Q8IUX7 1158 aa31.08■■■□□ 2.57
ERGIC1-206ENST00000519860 ASAP1Q9ULH1 1129 aa31.08■■■□□ 2.57
ERGIC1-206ENST00000519860 MSL1Q68DK7 614 aa31.07■■■□□ 2.56
ERGIC1-206ENST00000519860 MAP3K5Q99683 1374 aa31.05■■■□□ 2.56
ERGIC1-206ENST00000519860 C4BP0C0L5 1744 aa31.05■■■□□ 2.56
ERGIC1-206ENST00000519860 COL24A1Q17RW2 1714 aa31.05■■■□□ 2.56
ERGIC1-206ENST00000519860 AK7Q96M32 723 aa31.05■■■□□ 2.56
ERGIC1-206ENST00000519860 LOC102724428A0A0B4J2F2 783 aa31.04■■■□□ 2.56
ERGIC1-206ENST00000519860 SIK1P57059 783 aa31.04■■■□□ 2.56
ERGIC1-206ENST00000519860 PLEKHO1Q53GL0 409 aaPredicted RBP31.04■■■□□ 2.56
ERGIC1-206ENST00000519860 PLEKHG2Q9H7P9 1386 aa31.04■■■□□ 2.56
ERGIC1-206ENST00000519860 ZNF530Q6P9A1 599 aaPredicted RBP31.03■■■□□ 2.56
ERGIC1-206ENST00000519860 SMIM5Q71RC9 77 aa31.03■■■□□ 2.56
ERGIC1-206ENST00000519860 CC2D1BQ5T0F9 858 aaKnown RBP31.02■■■□□ 2.56
ERGIC1-206ENST00000519860 SULT6B1Q6IMI4 303 aa31.02■■■□□ 2.56
ERGIC1-206ENST00000519860 AMIGO3Q86WK7 504 aa31.02■■■□□ 2.56
ERGIC1-206ENST00000519860 PHF14O94880 888 aa31.01■■■□□ 2.55
ERGIC1-206ENST00000519860 HMGB2P26583 209 aaKnown RBP31.01■■■□□ 2.55
ERGIC1-206ENST00000519860 LINC00116Q8NCU8 138 aa31.01■■■□□ 2.55
ERGIC1-206ENST00000519860 ATG3Q9NT62 314 aa31.01■■■□□ 2.55
ERGIC1-206ENST00000519860 PER1O15534 1290 aaPredicted RBP31■■■□□ 2.55
ERGIC1-206ENST00000519860 IL13P35225 146 aa31■■■□□ 2.55
ERGIC1-206ENST00000519860 CNGB1Q14028 1251 aaPredicted RBP31■■■□□ 2.55
ERGIC1-206ENST00000519860 AMOTQ4VCS5 1084 aa30.99■■■□□ 2.55
ERGIC1-206ENST00000519860 FLAD1Q8NFF5 587 aa30.99■■■□□ 2.55
ERGIC1-206ENST00000519860 DCAF5Q96JK2 942 aa30.99■■■□□ 2.55
ERGIC1-206ENST00000519860 HSP90AB1P08238 724 aaKnown RBP30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms