RNA–Protein interactions for RNA: ENST00000519622.5

PABPC1-212, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-212ENST00000519622 USP17L8P0C7I0 530 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ITGAEP38570 1179 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 CTDSPL2Q05D32 466 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 KCNH2Q12809 1159 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 HELBQ8NG08 1087 aaPredicted RBP6.61□□□□□ -1.35
PABPC1-212ENST00000519622 BAP1Q92560 729 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ATP13A2Q9NQ11 1180 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 GTF3C3Q9Y5Q9 886 aa6.61□□□□□ -1.35
PABPC1-212ENST00000519622 ADGRL2O95490 1459 aa6.6□□□□□ -1.35
PABPC1-212ENST00000519622 DAPK1P53355 1430 aa6.6□□□□□ -1.35
PABPC1-212ENST00000519622 TROQ12816 1431 aaPredicted RBP6.6□□□□□ -1.35
PABPC1-212ENST00000519622 SNRPBP14678 240 aaKnown RBP6.6□□□□□ -1.35
PABPC1-212ENST00000519622 FAM50AQ14320 339 aaKnown RBP6.6□□□□□ -1.35
PABPC1-212ENST00000519622 EHBP1Q8NDI1 1231 aa6.6□□□□□ -1.35
PABPC1-212ENST00000519622 LRRN4Q8WUT4 740 aa6.6□□□□□ -1.35
PABPC1-212ENST00000519622 GPATCH8Q9UKJ3 1502 aaKnown RBP6.6□□□□□ -1.35
PABPC1-212ENST00000519622 PRG4Q92954 1404 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-212ENST00000519622 TMEM259Q4ZIN3 620 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 DESI1Q6ICB0 168 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 LYPD8Q6UX82 237 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 TREML4Q6UXN2 200 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 SIN3AQ96ST3 1273 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 HMX1Q9NP08 348 aaPredicted RBP6.59□□□□□ -1.35
PABPC1-212ENST00000519622 SNRKQ9NRH2 765 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 ERCC6L2Q5T890 1561 aa6.59□□□□□ -1.35
PABPC1-212ENST00000519622 PZPP20742 1482 aa6.59□□□□□ -1.36
PABPC1-212ENST00000519622 CAMSAP2Q08AD1 1489 aa6.59□□□□□ -1.36
PABPC1-212ENST00000519622 TEX14Q8IWB6 1497 aa6.59□□□□□ -1.36
PABPC1-212ENST00000519622 ROCK1Q13464 1354 aa6.58□□□□□ -1.36
PABPC1-212ENST00000519622 CLASP1Q7Z460 1538 aa6.58□□□□□ -1.36
PABPC1-212ENST00000519622 MCM6Q14566 821 aa6.57□□□□□ -1.36
PABPC1-212ENST00000519622 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
PABPC1-212ENST00000519622 MAP10Q9P2G4 905 aa6.57□□□□□ -1.36
PABPC1-212ENST00000519622 ATP10BO94823 1461 aa6.57□□□□□ -1.36
PABPC1-212ENST00000519622 MBD5Q9P267 1494 aa6.57□□□□□ -1.36
PABPC1-212ENST00000519622 CTHP32929 405 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 MTMR14Q8NCE2 650 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 BANK1Q8NDB2 785 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 TLL2Q9Y6L7 1015 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 PREX2Q70Z35 1606 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 CDC42BPBQ9Y5S2 1711 aa6.56□□□□□ -1.36
PABPC1-212ENST00000519622 KDM5DQ9BY66 1539 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 SHANK2Q9UPX8 1470 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 F12P00748 615 aaPredicted RBP6.55□□□□□ -1.36
PABPC1-212ENST00000519622 NFX1Q12986 1120 aaKnown RBP6.55□□□□□ -1.36
PABPC1-212ENST00000519622 EPS8L1Q8TE68 723 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 ARHGEF5Q12774 1597 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 SAMD9LQ8IVG5 1584 aa6.55□□□□□ -1.36
PABPC1-212ENST00000519622 ZNF644Q9H582 1327 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-212ENST00000519622 TTC37Q6PGP7 1564 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 PPP1R15AO75807 674 aaPredicted RBP6.54□□□□□ -1.36
PABPC1-212ENST00000519622 BMP1P13497 986 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 NR6A1Q15406 480 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 TRIM46Q7Z4K8 759 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 FOXJ1Q92949 421 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 TIMELESSQ9UNS1 1208 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 WASF2Q9Y6W5 498 aa6.54□□□□□ -1.36
PABPC1-212ENST00000519622 WFS1O76024 890 aa6.53□□□□□ -1.36
PABPC1-212ENST00000519622 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
PABPC1-212ENST00000519622 GJD4Q96KN9 370 aaPredicted RBP6.53□□□□□ -1.36
PABPC1-212ENST00000519622 TRIM34Q9BYJ4 488 aa6.53□□□□□ -1.36
PABPC1-212ENST00000519622 ANKRD30BQ9BXX2 1392 aa6.53□□□□□ -1.36
PABPC1-212ENST00000519622 RPRD2Q5VT52 1461 aaKnown RBP6.53□□□□□ -1.36
PABPC1-212ENST00000519622 MAST1Q9Y2H9 1570 aa6.52□□□□□ -1.36
PABPC1-212ENST00000519622 PTPRGP23470 1445 aa6.52□□□□□ -1.37
PABPC1-212ENST00000519622 NCOA1Q15788 1441 aa6.52□□□□□ -1.37
PABPC1-212ENST00000519622 CAPN5O15484 640 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-212ENST00000519622 VARSP26640 1264 aaKnown RBP6.52□□□□□ -1.37
PABPC1-212ENST00000519622 FLIIQ13045 1269 aa6.52□□□□□ -1.37
PABPC1-212ENST00000519622 SENP2Q9HC62 589 aa6.52□□□□□ -1.37
PABPC1-212ENST00000519622 POLR1AO95602 1720 aaPredicted RBP6.52□□□□□ -1.37
PABPC1-212ENST00000519622 CARMIL2Q6F5E8 1435 aa6.51□□□□□ -1.37
PABPC1-212ENST00000519622 POM121Q96HA1 1249 aa6.51□□□□□ -1.37
PABPC1-212ENST00000519622 ABCC2Q92887 1545 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 UNC13BO14795 1591 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 ARID3CA6NKF2 412 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 TERTO14746 1132 aaKnown RBP6.5□□□□□ -1.37
PABPC1-212ENST00000519622 NNTQ13423 1086 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 MPNDQ8N594 471 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 KLF16Q9BXK1 252 aaPredicted RBP6.5□□□□□ -1.37
PABPC1-212ENST00000519622 RRP7BPQ9NSQ0 103 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 TBC1D2BQ9UPU7 963 aa6.5□□□□□ -1.37
PABPC1-212ENST00000519622 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.5□□□□□ -1.37
PABPC1-212ENST00000519622 CHMP7Q8WUX9 453 aaPredicted RBP6.49□□□□□ -1.37
PABPC1-212ENST00000519622 KIFC2Q96AC6 838 aa6.49□□□□□ -1.37
PABPC1-212ENST00000519622 CLUAP1Q96AJ1 413 aa6.49□□□□□ -1.37
PABPC1-212ENST00000519622 NDUFB9Q9Y6M9 179 aa6.49□□□□□ -1.37
PABPC1-212ENST00000519622 ZCCHC11Q5TAX3 1644 aaKnown RBP6.49□□□□□ -1.37
PABPC1-212ENST00000519622 SPATA31E1Q6ZUB1 1445 aa6.49□□□□□ -1.37
PABPC1-212ENST00000519622 PLXNC1O60486 1568 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 UHRF1BP1LA0JNW5 1464 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 MAGI2Q86UL8 1455 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 SOCS7O14512 581 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 GPR37L1O60883 481 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 TIMP2P16035 220 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 ZFP42Q96MM3 310 aa6.48□□□□□ -1.37
PABPC1-212ENST00000519622 CDK15Q96Q40 435 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms