RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 PPP1R1BQ9UD71 204 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 MEGF6O75095 1541 aa17.25■□□□□ 0.35
TRAPPC9-206ENST00000519482 LY75O60449 1722 aa17.23■□□□□ 0.35
TRAPPC9-206ENST00000519482 QSER1Q2KHR3 1735 aa17.23■□□□□ 0.35
TRAPPC9-206ENST00000519482 HSP90AB2PQ58FF8 381 aa17.22■□□□□ 0.35
TRAPPC9-206ENST00000519482 RAPGEF4Q8WZA2 1011 aa17.22■□□□□ 0.35
TRAPPC9-206ENST00000519482 EIF4G2P78344 907 aaKnown RBP eCLIP17.21■□□□□ 0.358e-7■■■■■ 44
TRAPPC9-206ENST00000519482 PDGFDQ9GZP0 370 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC9-206ENST00000519482 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC9-206ENST00000519482 SLC27A3Q5K4L6 730 aa17.2■□□□□ 0.34
TRAPPC9-206ENST00000519482 USHBP1Q8N6Y0 703 aa17.2■□□□□ 0.34
TRAPPC9-206ENST00000519482 ZBTB7AO95365 584 aa17.19■□□□□ 0.34
TRAPPC9-206ENST00000519482 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
TRAPPC9-206ENST00000519482 EMILIN1Q9Y6C2 1016 aa17.19■□□□□ 0.34
TRAPPC9-206ENST00000519482 PKD1L3Q7Z443 1732 aa17.18■□□□□ 0.34
TRAPPC9-206ENST00000519482 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC9-206ENST00000519482 MTFR1LQ9H019 292 aa17.18■□□□□ 0.34
TRAPPC9-206ENST00000519482 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
TRAPPC9-206ENST00000519482 NSD2O96028 1365 aa17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 HSPA5P11021 654 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 PTGER2P43116 358 aa17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 WASHC2AQ641Q2 1341 aa17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 PCDH11XQ9BZA7 1347 aa17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 PCDH11YQ9BZA8 1340 aa17.17■□□□□ 0.34
TRAPPC9-206ENST00000519482 NCAPD2Q15021 1401 aa17.16■□□□□ 0.34
TRAPPC9-206ENST00000519482 POLR3GLQ9BT43 218 aa17.16■□□□□ 0.34
TRAPPC9-206ENST00000519482 ATF5Q9Y2D1 282 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC9-206ENST00000519482 TUBGCP6Q96RT7 1819 aa17.16■□□□□ 0.34
TRAPPC9-206ENST00000519482 ITGB4P16144 1822 aa17.15■□□□□ 0.34
TRAPPC9-206ENST00000519482 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
TRAPPC9-206ENST00000519482 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
TRAPPC9-206ENST00000519482 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
TRAPPC9-206ENST00000519482 PPM1GO15355 546 aaPredicted RBP17.14■□□□□ 0.33
TRAPPC9-206ENST00000519482 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
TRAPPC9-206ENST00000519482 SGIP1Q9BQI5 828 aa17.13■□□□□ 0.33
TRAPPC9-206ENST00000519482 POLKQ9UBT6 870 aa17.13■□□□□ 0.33
TRAPPC9-206ENST00000519482 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
TRAPPC9-206ENST00000519482 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
TRAPPC9-206ENST00000519482 CYP27B1O15528 508 aa17.11■□□□□ 0.33
TRAPPC9-206ENST00000519482 TAF1LQ8IZX4 1826 aa17.11■□□□□ 0.33
TRAPPC9-206ENST00000519482 C5P01031 1676 aa17.1■□□□□ 0.33
TRAPPC9-206ENST00000519482 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-206ENST00000519482 PANK3Q9H999 370 aa17.1■□□□□ 0.33
TRAPPC9-206ENST00000519482 CCNL1Q9UK58 526 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-206ENST00000519482 EYA1Q99502 592 aa17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 PLEKHG2Q9H7P9 1386 aa17.09■□□□□ 0.33
TRAPPC9-206ENST00000519482 KCNQ4P56696 695 aa17.08■□□□□ 0.32
TRAPPC9-206ENST00000519482 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-206ENST00000519482 ARXQ96QS3 562 aa17.08■□□□□ 0.32
TRAPPC9-206ENST00000519482 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
TRAPPC9-206ENST00000519482 FHDC1Q9C0D6 1143 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-206ENST00000519482 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
TRAPPC9-206ENST00000519482 TNNT2P45379 298 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-206ENST00000519482 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-206ENST00000519482 MPRIPQ6WCQ1 1025 aa17.06■□□□□ 0.32
TRAPPC9-206ENST00000519482 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
TRAPPC9-206ENST00000519482 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC9-206ENST00000519482 YY1P25490 414 aa17.04■□□□□ 0.32
TRAPPC9-206ENST00000519482 POLD1P28340 1107 aa17.04■□□□□ 0.32
TRAPPC9-206ENST00000519482 IGSF1Q8N6C5 1336 aa17.03■□□□□ 0.32
TRAPPC9-206ENST00000519482 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
TRAPPC9-206ENST00000519482 KNSTRNQ9Y448 316 aa17.03■□□□□ 0.32
TRAPPC9-206ENST00000519482 C4BP0C0L5 1744 aa17.02■□□□□ 0.32
TRAPPC9-206ENST00000519482 CHD4Q14839 1912 aa17.02■□□□□ 0.32
TRAPPC9-206ENST00000519482 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
TRAPPC9-206ENST00000519482 PIGBQ92521 554 aa17.02■□□□□ 0.32
TRAPPC9-206ENST00000519482 PHKG2P15735 406 aa17.01■□□□□ 0.31
TRAPPC9-206ENST00000519482 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
TRAPPC9-206ENST00000519482 UBR3Q6ZT12 1888 aa17■□□□□ 0.31
TRAPPC9-206ENST00000519482 COL23A1Q86Y22 540 aaPredicted RBP17■□□□□ 0.31
TRAPPC9-206ENST00000519482 TMOD3Q9NYL9 352 aa16.99■□□□□ 0.31
TRAPPC9-206ENST00000519482 ZNF316A6NFI3 1004 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-206ENST00000519482 MSH5O43196 834 aa16.98■□□□□ 0.31
TRAPPC9-206ENST00000519482 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
TRAPPC9-206ENST00000519482 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-206ENST00000519482 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
TRAPPC9-206ENST00000519482 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-206ENST00000519482 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
TRAPPC9-206ENST00000519482 AMER1Q5JTC6 1135 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-206ENST00000519482 LOC102724428A0A0B4J2F2 783 aa16.95■□□□□ 0.3
TRAPPC9-206ENST00000519482 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
TRAPPC9-206ENST00000519482 SIK1P57059 783 aa16.95■□□□□ 0.3
TRAPPC9-206ENST00000519482 AK7Q96M32 723 aa16.95■□□□□ 0.3
TRAPPC9-206ENST00000519482 UTRNP46939 3433 aa16.94■□□□□ 0.3
TRAPPC9-206ENST00000519482 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
TRAPPC9-206ENST00000519482 DCAF5Q96JK2 942 aa16.94■□□□□ 0.3
TRAPPC9-206ENST00000519482 ASAP1Q9ULH1 1129 aa16.94■□□□□ 0.3
TRAPPC9-206ENST00000519482 KDRP35968 1356 aa16.93■□□□□ 0.3
TRAPPC9-206ENST00000519482 ATG3Q9NT62 314 aa16.93■□□□□ 0.3
TRAPPC9-206ENST00000519482 SSFA2P28290 1259 aa16.92■□□□□ 0.3
TRAPPC9-206ENST00000519482 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC9-206ENST00000519482 SCN11AQ9UI33 1791 aa16.92■□□□□ 0.3
TRAPPC9-206ENST00000519482 COL5A3P25940 1745 aaPredicted RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms