RNA–Protein interactions for RNA: ENST00000519278.5

NDRG1-212, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 3,983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-212ENST00000519278 RGS12O14924 1447 aa11.9□□□□□ -0.5
NDRG1-212ENST00000519278 K7ELQ4 463 aaPredicted RBP11.9□□□□□ -0.5
NDRG1-212ENST00000519278 FYB1O15117 783 aa11.9□□□□□ -0.5
NDRG1-212ENST00000519278 PDLIM2Q96JY6 352 aa11.9□□□□□ -0.5
NDRG1-212ENST00000519278 CDCA8Q53HL2 280 aa11.9□□□□□ -0.5
NDRG1-212ENST00000519278 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
NDRG1-212ENST00000519278 SSH1Q8WYL5 1049 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 CABP2Q9NPB3 220 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 TNRQ92752 1358 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 KCNJ4P48050 445 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 TMEM57Q8N5G2 664 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 TECPR2O15040 1411 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 SMC4Q9NTJ3 1288 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 ATP7BP35670 1465 aa11.89□□□□□ -0.51
NDRG1-212ENST00000519278 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 VGFO15240 615 aaPredicted RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 ZNF445P59923 1031 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 EXOSC9Q06265 439 aaKnown RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 TRERF1Q96PN7 1200 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 LMBRD1Q9NUN5 540 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 NUCB1Q02818 461 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 SPDYE4A6NLX3 237 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 PLCB2Q00722 1185 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 FBXO31Q5XUX0 539 aaPredicted RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 NOB1Q9ULX3 412 aaKnown RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 PIK3R4Q99570 1358 aa11.88□□□□□ -0.51
NDRG1-212ENST00000519278 IBTKQ9P2D0 1353 aaPredicted RBP11.88□□□□□ -0.51
NDRG1-212ENST00000519278 PATL2C9JE40 543 aaKnown RBP11.87□□□□□ -0.51
NDRG1-212ENST00000519278 ZBTB40Q9NUA8 1239 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 ZKSCAN5Q9Y2L8 839 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 NWD1Q149M9 1564 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 FBLN1P23142 703 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 BRD2P25440 801 aaKnown RBP11.87□□□□□ -0.51
NDRG1-212ENST00000519278 TPRNQ4KMQ1 711 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 CLEC17AQ6ZS10 378 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 TBC1D9Q6ZT07 1266 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
NDRG1-212ENST00000519278 MPNDQ8N594 471 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 GPT2Q8TD30 523 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
NDRG1-212ENST00000519278 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
NDRG1-212ENST00000519278 FAM177BA6PVY3 158 aa11.86□□□□□ -0.51
NDRG1-212ENST00000519278 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
NDRG1-212ENST00000519278 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
NDRG1-212ENST00000519278 CHD1LQ86WJ1 897 aa11.86□□□□□ -0.51
NDRG1-212ENST00000519278 SOX12O15370 315 aa11.86□□□□□ -0.51
NDRG1-212ENST00000519278 ZNF830Q96NB3 372 aaPredicted RBP11.86□□□□□ -0.51
NDRG1-212ENST00000519278 METP08581 1390 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 DYNC1I1O14576 645 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 ZBTB22O15209 634 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 HS1BP3Q53T59 392 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 C1orf115Q9H7X2 142 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
NDRG1-212ENST00000519278 PRPF40AO75400 957 aaKnown RBP11.84□□□□□ -0.51
NDRG1-212ENST00000519278 CSPP1Q1MSJ5 1256 aa11.84□□□□□ -0.51
NDRG1-212ENST00000519278 RNF214Q8ND24 703 aa11.84□□□□□ -0.51
NDRG1-212ENST00000519278 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
NDRG1-212ENST00000519278 ZNF710Q8N1W2 664 aa11.84□□□□□ -0.51
NDRG1-212ENST00000519278 CHAF1AQ13111 956 aaPredicted RBP11.84□□□□□ -0.51
NDRG1-212ENST00000519278 CYP2E1P05181 493 aaPredicted RBP11.83□□□□□ -0.52
NDRG1-212ENST00000519278 SRPK2P78362 688 aaKnown RBP11.83□□□□□ -0.52
NDRG1-212ENST00000519278 PTCH1Q13635 1447 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 BMP2KLQ5H9B9 411 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 ANKRD45Q5TZF3 282 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 ZGPATQ8N5A5 531 aaKnown RBP11.83□□□□□ -0.52
NDRG1-212ENST00000519278 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
NDRG1-212ENST00000519278 SYCE3A1L190 88 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 DMTNQ08495 405 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 ZDHHC9Q9Y397 364 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 LETM1O95202 739 aaPredicted RBP11.83□□□□□ -0.52
NDRG1-212ENST00000519278 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
NDRG1-212ENST00000519278 ADAMTS13Q76LX8 1427 aa11.82□□□□□ -0.52
NDRG1-212ENST00000519278 PTMSP20962 102 aa11.82□□□□□ -0.52
NDRG1-212ENST00000519278 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
NDRG1-212ENST00000519278 SASS6Q6UVJ0 657 aa11.82□□□□□ -0.52
NDRG1-212ENST00000519278 KIF20AO95235 890 aa11.82□□□□□ -0.52
NDRG1-212ENST00000519278 U2AF1L5P0DN76 240 aaPredicted RBP11.82□□□□□ -0.52
NDRG1-212ENST00000519278 U2AF1Q01081 240 aaKnown RBP eCLIP11.82□□□□□ -0.52
NDRG1-212ENST00000519278 CCDC94Q9BW85 323 aaPredicted RBP11.82□□□□□ -0.52
NDRG1-212ENST00000519278 FOXD4L5Q5VV16 416 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-212ENST00000519278 FOXD4L4Q8WXT5 416 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-212ENST00000519278 C17orf53Q8N3J3 647 aaPredicted RBP11.81□□□□□ -0.52
NDRG1-212ENST00000519278 PTPRUQ92729 1446 aa11.81□□□□□ -0.52
NDRG1-212ENST00000519278 KIF16BQ96L93 1317 aa11.81□□□□□ -0.52
NDRG1-212ENST00000519278 FER1L4A9Z1Z3 1794 aa11.81□□□□□ -0.52
NDRG1-212ENST00000519278 ZNF853P0CG23 659 aa11.81□□□□□ -0.52
NDRG1-212ENST00000519278 SIRT2Q8IXJ6 389 aa11.81□□□□□ -0.52
NDRG1-212ENST00000519278 ERICH4A6NGS2 130 aa11.8□□□□□ -0.52
NDRG1-212ENST00000519278 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
NDRG1-212ENST00000519278 SECISBP2LQ93073 1101 aaKnown RBP11.8□□□□□ -0.52
NDRG1-212ENST00000519278 CRYBG1Q9Y4K1 1723 aa11.8□□□□□ -0.52
NDRG1-212ENST00000519278 TMPOP42166 694 aaKnown RBP11.8□□□□□ -0.52
NDRG1-212ENST00000519278 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
NDRG1-212ENST00000519278 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 249.9 ms