RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 KCNQ2O43526 872 aa25.39■■□□□ 1.66
FAM49B-208ENST00000518344 PARD3Q8TEW0 1356 aa25.35■■□□□ 1.65
FAM49B-208ENST00000518344 PLSCR1O15162 318 aa25.34■■□□□ 1.65
FAM49B-208ENST00000518344 MTHFSP49914 203 aa25.34■■□□□ 1.65
FAM49B-208ENST00000518344 NPC1L1Q9UHC9 1359 aa25.32■■□□□ 1.64
FAM49B-208ENST00000518344 SBF2Q86WG5 1849 aa25.31■■□□□ 1.64
FAM49B-208ENST00000518344 PSDA5PKW4 1024 aaPredicted RBP25.31■■□□□ 1.64
FAM49B-208ENST00000518344 SYTL4Q96C24 671 aaPredicted RBP25.31■■□□□ 1.64
FAM49B-208ENST00000518344 PCDH11XQ9BZA7 1347 aa25.3■■□□□ 1.64
FAM49B-208ENST00000518344 PCDH11YQ9BZA8 1340 aa25.3■■□□□ 1.64
FAM49B-208ENST00000518344 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
FAM49B-208ENST00000518344 PRIM1P49642 420 aaKnown RBP25.29■■□□□ 1.64
FAM49B-208ENST00000518344 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
FAM49B-208ENST00000518344 R3HDM1Q15032 1099 aaKnown RBP25.28■■□□□ 1.64
FAM49B-208ENST00000518344 IGSF1Q8N6C5 1336 aa25.28■■□□□ 1.64
FAM49B-208ENST00000518344 IL13P35225 146 aa25.27■■□□□ 1.64
FAM49B-208ENST00000518344 ZEB1P37275 1124 aaPredicted RBP25.27■■□□□ 1.64
FAM49B-208ENST00000518344 NBPF14Q5TI25 921 aa25.27■■□□□ 1.64
FAM49B-208ENST00000518344 CYP27B1O15528 508 aa25.26■■□□□ 1.63
FAM49B-208ENST00000518344 TXNRD1Q16881 649 aa25.25■■□□□ 1.63
FAM49B-208ENST00000518344 PROM2Q8N271 834 aa25.25■■□□□ 1.63
FAM49B-208ENST00000518344 NHSQ6T4R5 1651 aa25.25■■□□□ 1.63
FAM49B-208ENST00000518344 SULT6B1Q6IMI4 303 aa25.24■■□□□ 1.63
FAM49B-208ENST00000518344 AEBP1Q8IUX7 1158 aa25.23■■□□□ 1.63
FAM49B-208ENST00000518344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.23■■□□□ 1.63
FAM49B-208ENST00000518344 SHANK3Q9BYB0 1731 aa25.23■■□□□ 1.63
FAM49B-208ENST00000518344 DIAPH1O60610 1272 aaKnown RBP25.22■■□□□ 1.63
FAM49B-208ENST00000518344 IFNL2Q8IZJ0 200 aa25.2■■□□□ 1.62
FAM49B-208ENST00000518344 RREB1Q92766 1687 aa25.2■■□□□ 1.62
FAM49B-208ENST00000518344 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
FAM49B-208ENST00000518344 PHKG2P15735 406 aa25.18■■□□□ 1.62
FAM49B-208ENST00000518344 MPRIPQ6WCQ1 1025 aa25.18■■□□□ 1.62
FAM49B-208ENST00000518344 DDX10Q13206 875 aaKnown RBP25.17■■□□□ 1.62
FAM49B-208ENST00000518344 NKX1-1Q15270 411 aaPredicted RBP25.17■■□□□ 1.62
FAM49B-208ENST00000518344 NUP188Q5SRE5 1749 aa25.17■■□□□ 1.62
FAM49B-208ENST00000518344 HMOX1P09601 288 aa25.16■■□□□ 1.62
FAM49B-208ENST00000518344 AMOTQ4VCS5 1084 aa25.16■■□□□ 1.62
FAM49B-208ENST00000518344 RGPD3A6NKT7 1758 aaPredicted RBP25.16■■□□□ 1.62
FAM49B-208ENST00000518344 RGPD4Q7Z3J3 1758 aa25.16■■□□□ 1.62
FAM49B-208ENST00000518344 PKD1L3Q7Z443 1732 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 DOT1LQ8TEK3 1739 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 BTAF1O14981 1849 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 PPP2R1AP30153 589 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 CFAP53Q96M91 514 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 KAT6BQ8WYB5 2073 aa25.15■■□□□ 1.62
FAM49B-208ENST00000518344 U2SURPO15042 1029 aaKnown RBP25.14■■□□□ 1.62
FAM49B-208ENST00000518344 ANO8Q9HCE9 1232 aaPredicted RBP25.14■■□□□ 1.62
FAM49B-208ENST00000518344 ZNF530Q6P9A1 599 aaPredicted RBP25.13■■□□□ 1.61
FAM49B-208ENST00000518344 STK32BQ9NY57 414 aa25.13■■□□□ 1.61
FAM49B-208ENST00000518344 KDRP35968 1356 aa25.13■■□□□ 1.61
FAM49B-208ENST00000518344 PLEKHG2Q9H7P9 1386 aa25.13■■□□□ 1.61
FAM49B-208ENST00000518344 LRRC4BQ9NT99 713 aa25.12■■□□□ 1.61
FAM49B-208ENST00000518344 KCNQ4P56696 695 aa25.1■■□□□ 1.61
FAM49B-208ENST00000518344 C1orf141Q5JVX7 400 aa25.1■■□□□ 1.61
FAM49B-208ENST00000518344 SLC27A3Q5K4L6 730 aa25.1■■□□□ 1.61
FAM49B-208ENST00000518344 HSP90AB1P08238 724 aaKnown RBP25.09■■□□□ 1.61
FAM49B-208ENST00000518344 SLC15A2Q16348 729 aa25.09■■□□□ 1.61
FAM49B-208ENST00000518344 PIGBQ92521 554 aa25.09■■□□□ 1.61
FAM49B-208ENST00000518344 TMOD3Q9NYL9 352 aa25.09■■□□□ 1.61
FAM49B-208ENST00000518344 CCNL1Q9UK58 526 aaPredicted RBP25.08■■□□□ 1.61
FAM49B-208ENST00000518344 COL3A1P02461 1466 aaPredicted RBP25.08■■□□□ 1.6
FAM49B-208ENST00000518344 DCAF5Q96JK2 942 aa25.07■■□□□ 1.6
FAM49B-208ENST00000518344 SMARCC1Q92922 1105 aaPredicted RBP25.05■■□□□ 1.6
FAM49B-208ENST00000518344 NUDCQ9Y266 331 aa25.05■■□□□ 1.6
FAM49B-208ENST00000518344 PALLDQ8WX93 1383 aa25.04■■□□□ 1.6
FAM49B-208ENST00000518344 TOGARAM1Q9Y4F4 1720 aa25.03■■□□□ 1.6
FAM49B-208ENST00000518344 ERVV-2B6SEH9 535 aa25.03■■□□□ 1.6
FAM49B-208ENST00000518344 CABP4P57796 275 aa25.02■■□□□ 1.6
FAM49B-208ENST00000518344 ZNF827Q17R98 1081 aa25.02■■□□□ 1.6
FAM49B-208ENST00000518344 MTHFSDQ2M296 383 aaKnown RBP25.02■■□□□ 1.6
FAM49B-208ENST00000518344 PDGFDQ9GZP0 370 aaPredicted RBP25.02■■□□□ 1.6
FAM49B-208ENST00000518344 AKAP4Q5JQC9 854 aa25.01■■□□□ 1.59
FAM49B-208ENST00000518344 ASAP1Q9ULH1 1129 aa25.01■■□□□ 1.59
FAM49B-208ENST00000518344 U2AF1L5P0DN76 240 aaPredicted RBP25■■□□□ 1.59
FAM49B-208ENST00000518344 U2AF1Q01081 240 aaKnown RBP eCLIP25■■□□□ 1.59
FAM49B-208ENST00000518344 AKT1S1Q96B36 256 aa25■■□□□ 1.59
FAM49B-208ENST00000518344 KDM6AO15550 1401 aaPredicted RBP24.99■■□□□ 1.59
FAM49B-208ENST00000518344 RALBP1Q15311 655 aa24.99■■□□□ 1.59
FAM49B-208ENST00000518344 TFCP2L1Q9NZI6 479 aa24.98■■□□□ 1.59
FAM49B-208ENST00000518344 SRCAPQ6ZRS2 3230 aa24.97■■□□□ 1.59
FAM49B-208ENST00000518344 ZBTB7AO95365 584 aa24.97■■□□□ 1.59
FAM49B-208ENST00000518344 SPON1Q9HCB6 807 aa24.97■■□□□ 1.59
FAM49B-208ENST00000518344 ATG3Q9NT62 314 aa24.97■■□□□ 1.59
FAM49B-208ENST00000518344 ITGB4P16144 1822 aa24.97■■□□□ 1.59
FAM49B-208ENST00000518344 PRKAR2BP31323 418 aa24.96■■□□□ 1.59
FAM49B-208ENST00000518344 NFATC2IPQ8NCF5 419 aa24.96■■□□□ 1.59
FAM49B-208ENST00000518344 LGR6Q9HBX8 967 aa24.96■■□□□ 1.59
FAM49B-208ENST00000518344 PAPPAQ13219 1627 aa24.96■■□□□ 1.59
FAM49B-208ENST00000518344 LY75O60449 1722 aa24.95■■□□□ 1.59
FAM49B-208ENST00000518344 LOC102724428A0A0B4J2F2 783 aa24.95■■□□□ 1.58
FAM49B-208ENST00000518344 SIK1P57059 783 aa24.95■■□□□ 1.58
FAM49B-208ENST00000518344 RSPH6AQ9H0K4 717 aa24.95■■□□□ 1.58
FAM49B-208ENST00000518344 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
FAM49B-208ENST00000518344 GAS2L2Q8NHY3 880 aa24.93■■□□□ 1.58
FAM49B-208ENST00000518344 PHACTR3Q96KR7 559 aa24.93■■□□□ 1.58
FAM49B-208ENST00000518344 RBM42Q9BTD8 480 aaKnown RBP24.93■■□□□ 1.58
FAM49B-208ENST00000518344 ATF5Q9Y2D1 282 aaPredicted RBP24.93■■□□□ 1.58
FAM49B-208ENST00000518344 RNMTO43148 476 aaKnown RBP24.92■■□□□ 1.58
FAM49B-208ENST00000518344 FCHSD2O94868 740 aa24.92■■□□□ 1.58
FAM49B-208ENST00000518344 ATP6V1AP38606 617 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms