RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 C5P01031 1676 aa16.3■□□□□ 0.2
TRAPPC9-203ENST00000517667 A0A1W2PP64 1363 aa16.29■□□□□ 0.2
TRAPPC9-203ENST00000517667 NSD2O96028 1365 aa16.29■□□□□ 0.2
TRAPPC9-203ENST00000517667 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-203ENST00000517667 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
TRAPPC9-203ENST00000517667 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC9-203ENST00000517667 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
TRAPPC9-203ENST00000517667 USP47Q96K76 1375 aa16.27■□□□□ 0.2
TRAPPC9-203ENST00000517667 YBX3P16989 372 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC9-203ENST00000517667 KCNQ4P56696 695 aa16.27■□□□□ 0.2
TRAPPC9-203ENST00000517667 MSH5O43196 834 aa16.26■□□□□ 0.19
TRAPPC9-203ENST00000517667 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
TRAPPC9-203ENST00000517667 LTV1Q96GA3 475 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC9-203ENST00000517667 SLC12A5Q9H2X9 1139 aa16.26■□□□□ 0.19
TRAPPC9-203ENST00000517667 ATP10DQ9P241 1426 aa16.26■□□□□ 0.19
TRAPPC9-203ENST00000517667 TAF1LQ8IZX4 1826 aa16.25■□□□□ 0.19
TRAPPC9-203ENST00000517667 PUS7Q96PZ0 661 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-203ENST00000517667 SIN3AQ96ST3 1273 aa16.25■□□□□ 0.19
TRAPPC9-203ENST00000517667 MEGF6O75095 1541 aa16.24■□□□□ 0.19
TRAPPC9-203ENST00000517667 CGNL1Q0VF96 1302 aa16.24■□□□□ 0.19
TRAPPC9-203ENST00000517667 CARD11Q9BXL7 1154 aa16.24■□□□□ 0.19
TRAPPC9-203ENST00000517667 RTL1A6NKG5 1358 aa16.24■□□□□ 0.19
TRAPPC9-203ENST00000517667 HOXC9P31274 260 aa16.23■□□□□ 0.19
TRAPPC9-203ENST00000517667 NEUROD1Q13562 356 aa16.23■□□□□ 0.19
TRAPPC9-203ENST00000517667 COL23A1Q86Y22 540 aaPredicted RBP16.23■□□□□ 0.19
TRAPPC9-203ENST00000517667 COG3Q96JB2 828 aa16.23■□□□□ 0.19
TRAPPC9-203ENST00000517667 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
TRAPPC9-203ENST00000517667 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
TRAPPC9-203ENST00000517667 AMPHP49418 695 aa16.22■□□□□ 0.19
TRAPPC9-203ENST00000517667 FLAD1Q8NFF5 587 aa16.22■□□□□ 0.19
TRAPPC9-203ENST00000517667 GPBP1L1Q9HC44 474 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-203ENST00000517667 SMG6Q86US8 1419 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-203ENST00000517667 ADCY9O60503 1353 aa16.21■□□□□ 0.19
TRAPPC9-203ENST00000517667 MSL1Q68DK7 614 aa16.2■□□□□ 0.18
TRAPPC9-203ENST00000517667 C4BP0C0L5 1744 aa16.19■□□□□ 0.18
TRAPPC9-203ENST00000517667 HSPA6P17066 643 aa16.18■□□□□ 0.18
TRAPPC9-203ENST00000517667 RAPGEF4Q8WZA2 1011 aa16.18■□□□□ 0.18
TRAPPC9-203ENST00000517667 NSD3Q9BZ95 1437 aa16.18■□□□□ 0.18
TRAPPC9-203ENST00000517667 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
TRAPPC9-203ENST00000517667 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
TRAPPC9-203ENST00000517667 PALLDQ8WX93 1383 aa16.17■□□□□ 0.18
TRAPPC9-203ENST00000517667 UBR3Q6ZT12 1888 aa16.17■□□□□ 0.18
TRAPPC9-203ENST00000517667 ITGB4P16144 1822 aa16.17■□□□□ 0.18
TRAPPC9-203ENST00000517667 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
TRAPPC9-203ENST00000517667 TOGARAM1Q9Y4F4 1720 aa16.16■□□□□ 0.18
TRAPPC9-203ENST00000517667 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC9-203ENST00000517667 NBPF6Q5VWK0 638 aa16.15■□□□□ 0.18
TRAPPC9-203ENST00000517667 NBPF4Q96M43 638 aa16.15■□□□□ 0.18
TRAPPC9-203ENST00000517667 PKD1L3Q7Z443 1732 aa16.14■□□□□ 0.17
TRAPPC9-203ENST00000517667 KIF20BQ96Q89 1820 aa16.13■□□□□ 0.17
TRAPPC9-203ENST00000517667 SMARCC1Q92922 1105 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC9-203ENST00000517667 AK7Q96M32 723 aa16.13■□□□□ 0.17
TRAPPC9-203ENST00000517667 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
TRAPPC9-203ENST00000517667 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 FBLN1P23142 703 aa16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 RRS1Q15050 365 aaKnown RBP16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 MPRIPQ6WCQ1 1025 aa16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 USHBP1Q8N6Y0 703 aa16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 IGSF1Q8N6C5 1336 aa16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 INSRP06213 1382 aa16.12■□□□□ 0.17
TRAPPC9-203ENST00000517667 FLT4P35916 1363 aa16.11■□□□□ 0.17
TRAPPC9-203ENST00000517667 TONSLQ96HA7 1378 aa16.11■□□□□ 0.17
TRAPPC9-203ENST00000517667 TESK2Q96S53 571 aa16.1■□□□□ 0.17
TRAPPC9-203ENST00000517667 MAP2P11137 1827 aaKnown RBP16.1■□□□□ 0.17
TRAPPC9-203ENST00000517667 SSFA2P28290 1259 aa16.09■□□□□ 0.17
TRAPPC9-203ENST00000517667 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.17
TRAPPC9-203ENST00000517667 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.08■□□□□ 0.16
TRAPPC9-203ENST00000517667 ST20-MTHFSA0A0A6YYL1 179 aa16.07■□□□□ 0.16
TRAPPC9-203ENST00000517667 FYB1O15117 783 aa16.07■□□□□ 0.16
TRAPPC9-203ENST00000517667 CYP27B1O15528 508 aa16.07■□□□□ 0.16
TRAPPC9-203ENST00000517667 PHF14O94880 888 aa16.07■□□□□ 0.16
TRAPPC9-203ENST00000517667 HSP90AB2PQ58FF8 381 aa16.06■□□□□ 0.16
TRAPPC9-203ENST00000517667 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
TRAPPC9-203ENST00000517667 ANKRD26Q9UPS8 1709 aa16.05■□□□□ 0.16
TRAPPC9-203ENST00000517667 KIF3CO14782 793 aa16.05■□□□□ 0.16
TRAPPC9-203ENST00000517667 APLP1P51693 650 aa16.05■□□□□ 0.16
TRAPPC9-203ENST00000517667 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
TRAPPC9-203ENST00000517667 KIAA1551Q9HCM1 1747 aa16.05■□□□□ 0.16
TRAPPC9-203ENST00000517667 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
TRAPPC9-203ENST00000517667 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
TRAPPC9-203ENST00000517667 PIGBQ92521 554 aa16.04■□□□□ 0.16
TRAPPC9-203ENST00000517667 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
TRAPPC9-203ENST00000517667 SIK1P57059 783 aa16.03■□□□□ 0.16
TRAPPC9-203ENST00000517667 WWC3Q9ULE0 1092 aa16.03■□□□□ 0.16
TRAPPC9-203ENST00000517667 SPG7Q9UQ90 795 aa16.03■□□□□ 0.16
TRAPPC9-203ENST00000517667 N4BP2Q86UW6 1770 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC9-203ENST00000517667 GNPATO15228 680 aa16.02■□□□□ 0.16
TRAPPC9-203ENST00000517667 LINC00116Q8NCU8 138 aa16.02■□□□□ 0.16
TRAPPC9-203ENST00000517667 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
TRAPPC9-203ENST00000517667 ZNF831Q5JPB2 1677 aa16.02■□□□□ 0.15
TRAPPC9-203ENST00000517667 TOMM70O94826 608 aa16.01■□□□□ 0.15
TRAPPC9-203ENST00000517667 TMF1P82094 1093 aa16.01■□□□□ 0.15
TRAPPC9-203ENST00000517667 TMOD3Q9NYL9 352 aa16.01■□□□□ 0.15
TRAPPC9-203ENST00000517667 WDR90Q96KV7 1748 aa16■□□□□ 0.15
TRAPPC9-203ENST00000517667 BRCA1P38398 1863 aaKnown RBP16■□□□□ 0.15
TRAPPC9-203ENST00000517667 TGFB2P61812 414 aa16■□□□□ 0.15
TRAPPC9-203ENST00000517667 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16■□□□□ 0.15
TRAPPC9-203ENST00000517667 MMP10P09238 476 aa15.99■□□□□ 0.15
TRAPPC9-203ENST00000517667 ATP6V1AP38606 617 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms