RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 PSDA5PKW4 1024 aaPredicted RBP19.65■□□□□ 0.74
SCARNA21-201ENST00000517026 RALBP1Q15311 655 aa19.65■□□□□ 0.74
SCARNA21-201ENST00000517026 SULT6B1Q6IMI4 303 aa19.64■□□□□ 0.73
SCARNA21-201ENST00000517026 CFAP53Q96M91 514 aa19.64■□□□□ 0.73
SCARNA21-201ENST00000517026 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
SCARNA21-201ENST00000517026 TRIM37O94972 964 aa19.63■□□□□ 0.73
SCARNA21-201ENST00000517026 BAG6P46379 1132 aa19.63■□□□□ 0.73
SCARNA21-201ENST00000517026 RGPD1P0DJD0 1748 aa19.62■□□□□ 0.73
SCARNA21-201ENST00000517026 COL3A1P02461 1466 aaPredicted RBP19.62■□□□□ 0.73
SCARNA21-201ENST00000517026 TNS1Q9HBL0 1735 aaKnown RBP19.62■□□□□ 0.73
SCARNA21-201ENST00000517026 WNK3Q9BYP7 1800 aa19.61■□□□□ 0.73
SCARNA21-201ENST00000517026 U2SURPO15042 1029 aaKnown RBP19.61■□□□□ 0.73
SCARNA21-201ENST00000517026 HMOX1P09601 288 aa19.61■□□□□ 0.73
SCARNA21-201ENST00000517026 EN1Q05925 392 aaPredicted RBP19.61■□□□□ 0.73
SCARNA21-201ENST00000517026 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
SCARNA21-201ENST00000517026 PRKRIP1Q9H875 184 aaPredicted RBP19.6■□□□□ 0.73
SCARNA21-201ENST00000517026 CYP27B1O15528 508 aa19.59■□□□□ 0.73
SCARNA21-201ENST00000517026 ACSBG1Q96GR2 724 aa19.58■□□□□ 0.72
SCARNA21-201ENST00000517026 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
SCARNA21-201ENST00000517026 MYBBP1AQ9BQG0 1328 aaKnown RBP19.57■□□□□ 0.72
SCARNA21-201ENST00000517026 KCNQ2O43526 872 aa19.57■□□□□ 0.72
SCARNA21-201ENST00000517026 KDRP35968 1356 aa19.57■□□□□ 0.72
SCARNA21-201ENST00000517026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.56■□□□□ 0.72
SCARNA21-201ENST00000517026 NUDCQ9Y266 331 aa19.56■□□□□ 0.72
SCARNA21-201ENST00000517026 BCL9O00512 1426 aa19.56■□□□□ 0.72
SCARNA21-201ENST00000517026 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
SCARNA21-201ENST00000517026 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
SCARNA21-201ENST00000517026 PLEKHO1Q53GL0 409 aaPredicted RBP19.55■□□□□ 0.72
SCARNA21-201ENST00000517026 CAMKK2Q96RR4 588 aa19.55■□□□□ 0.72
SCARNA21-201ENST00000517026 APBA3O96018 575 aa19.54■□□□□ 0.72
SCARNA21-201ENST00000517026 U2AF1L5P0DN76 240 aaPredicted RBP19.54■□□□□ 0.72
SCARNA21-201ENST00000517026 U2AF1Q01081 240 aaKnown RBP eCLIP19.54■□□□□ 0.72
SCARNA21-201ENST00000517026 R3HDM1Q15032 1099 aaKnown RBP19.54■□□□□ 0.72
SCARNA21-201ENST00000517026 BCL11BQ9C0K0 894 aaPredicted RBP19.54■□□□□ 0.72
SCARNA21-201ENST00000517026 PHKG2P15735 406 aa19.52■□□□□ 0.72
SCARNA21-201ENST00000517026 PRIM1P49642 420 aaKnown RBP19.52■□□□□ 0.72
SCARNA21-201ENST00000517026 EZH2Q15910 746 aaKnown RBP19.52■□□□□ 0.72
SCARNA21-201ENST00000517026 ZNF530Q6P9A1 599 aaPredicted RBP19.52■□□□□ 0.72
SCARNA21-201ENST00000517026 AMOTQ4VCS5 1084 aa19.51■□□□□ 0.71
SCARNA21-201ENST00000517026 IFNL2Q8IZJ0 200 aa19.51■□□□□ 0.71
SCARNA21-201ENST00000517026 NKX1-1Q15270 411 aaPredicted RBP19.5■□□□□ 0.71
SCARNA21-201ENST00000517026 SYTL4Q96C24 671 aaPredicted RBP19.5■□□□□ 0.71
SCARNA21-201ENST00000517026 RSPH6AQ9H0K4 717 aa19.5■□□□□ 0.71
SCARNA21-201ENST00000517026 PRKAR2BP31323 418 aa19.49■□□□□ 0.71
SCARNA21-201ENST00000517026 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
SCARNA21-201ENST00000517026 ANP32CO43423 234 aa19.48■□□□□ 0.71
SCARNA21-201ENST00000517026 MTHFSDQ2M296 383 aaKnown RBP19.48■□□□□ 0.71
SCARNA21-201ENST00000517026 PHACTR3Q96KR7 559 aa19.48■□□□□ 0.71
SCARNA21-201ENST00000517026 RREB1Q92766 1687 aa19.48■□□□□ 0.71
SCARNA21-201ENST00000517026 PLEKHG2Q9H7P9 1386 aa19.47■□□□□ 0.71
SCARNA21-201ENST00000517026 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
SCARNA21-201ENST00000517026 FCHSD2O94868 740 aa19.46■□□□□ 0.71
SCARNA21-201ENST00000517026 C1orf141Q5JVX7 400 aa19.46■□□□□ 0.71
SCARNA21-201ENST00000517026 CCDC184Q52MB2 194 aa19.45■□□□□ 0.7
SCARNA21-201ENST00000517026 MPRIPQ6WCQ1 1025 aa19.45■□□□□ 0.7
SCARNA21-201ENST00000517026 NUP188Q5SRE5 1749 aa19.44■□□□□ 0.7
SCARNA21-201ENST00000517026 PLSCR1O15162 318 aa19.43■□□□□ 0.7
SCARNA21-201ENST00000517026 HSP90AB1P08238 724 aaKnown RBP19.43■□□□□ 0.7
SCARNA21-201ENST00000517026 AKAP4Q5JQC9 854 aa19.43■□□□□ 0.7
SCARNA21-201ENST00000517026 DCAF5Q96JK2 942 aa19.43■□□□□ 0.7
SCARNA21-201ENST00000517026 PROM2Q8N271 834 aa19.42■□□□□ 0.7
SCARNA21-201ENST00000517026 PIGBQ92521 554 aa19.42■□□□□ 0.7
SCARNA21-201ENST00000517026 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
SCARNA21-201ENST00000517026 SBF2Q86WG5 1849 aa19.41■□□□□ 0.7
SCARNA21-201ENST00000517026 KDM6AO15550 1401 aaPredicted RBP19.41■□□□□ 0.7
SCARNA21-201ENST00000517026 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
SCARNA21-201ENST00000517026 PLEKHF1Q96S99 279 aa19.4■□□□□ 0.7
SCARNA21-201ENST00000517026 NHSQ6T4R5 1651 aa19.4■□□□□ 0.7
SCARNA21-201ENST00000517026 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.696e-7■■□□□ 12.2
SCARNA21-201ENST00000517026 TMOD3Q9NYL9 352 aa19.39■□□□□ 0.69
SCARNA21-201ENST00000517026 ERVV-2B6SEH9 535 aa19.38■□□□□ 0.69
SCARNA21-201ENST00000517026 RNMTO43148 476 aaKnown RBP19.38■□□□□ 0.69
SCARNA21-201ENST00000517026 TXNRD1Q16881 649 aa19.38■□□□□ 0.69
SCARNA21-201ENST00000517026 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
SCARNA21-201ENST00000517026 DOT1LQ8TEK3 1739 aa19.37■□□□□ 0.69
SCARNA21-201ENST00000517026 CABP4P57796 275 aa19.37■□□□□ 0.69
SCARNA21-201ENST00000517026 KAT6BQ8WYB5 2073 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 UTRNP46939 3433 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 GNAT3A8MTJ3 354 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 KCNQ4P56696 695 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 CCDC146Q8IYE0 955 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 NFATC2IPQ8NCF5 419 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 IL17REQ8NFR9 667 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 ASAP1Q9ULH1 1129 aa19.36■□□□□ 0.69
SCARNA21-201ENST00000517026 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
SCARNA21-201ENST00000517026 TOGARAM1Q9Y4F4 1720 aa19.35■□□□□ 0.69
SCARNA21-201ENST00000517026 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
SCARNA21-201ENST00000517026 NEFMP07197 916 aa19.34■□□□□ 0.69
SCARNA21-201ENST00000517026 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
SCARNA21-201ENST00000517026 ATG3Q9NT62 314 aa19.34■□□□□ 0.69
SCARNA21-201ENST00000517026 LRRC4BQ9NT99 713 aa19.34■□□□□ 0.69
SCARNA21-201ENST00000517026 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.69
SCARNA21-201ENST00000517026 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 BTAF1O14981 1849 aa19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 NFE2L2Q16236 605 aa19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 SMARCC1Q92922 1105 aaPredicted RBP19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 SLC52A2Q9HAB3 445 aa19.32■□□□□ 0.68
SCARNA21-201ENST00000517026 MCM10Q7L590 875 aa19.31■□□□□ 0.68
SCARNA21-201ENST00000517026 PNISRQ8TF01 805 aaKnown RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms