RNA–Protein interactions for RNA: ENST00000516960.1

RNU6-943P-201, Transcript of RNA, U6 small nuclear 943, pseudogene, humanhuman

BASIC

Gene RNU6-943P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-943P-201ENST00000516960 SLC43A3Q8NBI5 491 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 HELQQ8TDG4 1101 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 LNPKQ9C0E8 428 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 CWC22Q9HCG8 908 aaKnown RBP8.81□□□□□ -1
RNU6-943P-201ENST00000516960 MRS2Q9HD23 443 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 CUEDC1Q9NWM3 386 aaPredicted RBP8.81□□□□□ -1
RNU6-943P-201ENST00000516960 PRKAG2Q9UGJ0 569 aa8.81□□□□□ -1
RNU6-943P-201ENST00000516960 TTBK1Q5TCY1 1321 aaPredicted RBP8.8□□□□□ -1
RNU6-943P-201ENST00000516960 NDUFB5O43674 189 aa8.8□□□□□ -1
RNU6-943P-201ENST00000516960 CCNYL3P0C7X3 344 aa8.8□□□□□ -1
RNU6-943P-201ENST00000516960 ATP2B1P20020 1258 aa8.8□□□□□ -1
RNU6-943P-201ENST00000516960 TINF2Q9BSI4 451 aa8.8□□□□□ -1
RNU6-943P-201ENST00000516960 CCSER2Q9H7U1 834 aa8.8□□□□□ -1
RNU6-943P-201ENST00000516960 TREHO43280 583 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 LDHBP07195 334 aaKnown RBP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 NPR3P17342 541 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 PSEN2P49810 448 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 FMR1Q06787 632 aaKnown RBP eCLIP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 NAA30Q147X3 362 aaPredicted RBP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 DHX38Q92620 1227 aaKnown RBP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 RNF34Q969K3 372 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 COL26A1Q96A83 441 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 PRR14Q9BWN1 585 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 TGIF2Q9GZN2 237 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 CAPN10Q9HC96 672 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 METTL5Q9NRN9 209 aaKnown RBP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 PARP2Q9UGN5 583 aa8.79□□□□□ -1
RNU6-943P-201ENST00000516960 TMA7Q9Y2S6 64 aaKnown RBP8.79□□□□□ -1
RNU6-943P-201ENST00000516960 PRPF40AO75400 957 aaKnown RBP8.78□□□□□ -1
RNU6-943P-201ENST00000516960 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
RNU6-943P-201ENST00000516960 PLCB3Q01970 1234 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 RNF20Q5VTR2 975 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
RNU6-943P-201ENST00000516960 TMC1Q8TDI8 760 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 FAM161BQ96MY7 647 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 PURBQ96QR8 312 aaKnown RBP8.78□□□□□ -1
RNU6-943P-201ENST00000516960 NLRP2Q9NX02 1062 aa8.78□□□□□ -1
RNU6-943P-201ENST00000516960 M0R2N6 131 aa8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 SORBS3O60504 671 aa8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 GTF2F1P35269 517 aaKnown RBP eCLIP8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 USP4Q13107 963 aa8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 ZNF662Q6ZS27 426 aa8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 CITED4Q96RK1 184 aa8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 DUSP9Q99956 384 aaKnown RBP8.77□□□□□ -1.01
RNU6-943P-201ENST00000516960 MAPK8P45983 427 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 FANCCQ00597 558 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 TMC4Q7Z404 712 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 SCUBE3Q8IX30 993 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 NUDT12Q9BQG2 462 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 VTI1BQ9UEU0 232 aa8.76□□□□□ -1.01
RNU6-943P-201ENST00000516960 GNL2Q13823 731 aaKnown RBP8.75□□□□□ -1.01
RNU6-943P-201ENST00000516960 ARMC5Q96C12 935 aa8.75□□□□□ -1.01
RNU6-943P-201ENST00000516960 TLDC2A0PJX2 215 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 MPSTP25325 297 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 ZNF76P36508 570 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 PSMD2Q13200 908 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 DSC3Q14574 896 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 CCDC144BQ3MJ40 725 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 IQSEC3Q9UPP2 1182 aaPredicted RBP8.74□□□□□ -1.01
RNU6-943P-201ENST00000516960 FOXO3O43524 673 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 NR1I2O75469 434 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 HOXB1P14653 301 aaPredicted RBP8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 IGFBP4P22692 258 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 DAB2P98082 770 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 EHHADHQ08426 723 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 ZFRQ96KR1 1074 aaKnown RBP8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 CARD14Q9BXL6 1004 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 PRKD2Q9BZL6 878 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 ACBD3Q9H3P7 528 aa8.73□□□□□ -1.01
RNU6-943P-201ENST00000516960 ARHGAP33O14559 1287 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 DXOO77932 396 aaKnown RBP8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 ATP2B2Q01814 1243 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 DMRTB1Q96MA1 342 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 NBPF3Q9H094 633 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 RNF19AQ9NV58 838 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 PCDHB11Q9Y5F2 797 aa8.72□□□□□ -1.01
RNU6-943P-201ENST00000516960 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 POTEIP0CG38 1075 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 AAMPQ13685 434 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 MSS51Q4VC12 460 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 VTI1AQ96AJ9 217 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 LRCH3Q96II8 777 aa8.71□□□□□ -1.02
RNU6-943P-201ENST00000516960 DNAJA1P31689 397 aaKnown RBP8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 NBPF20Q3BBV1 942 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 ALKBH2Q6NS38 261 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 GMLQ99445 158 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 CCDC87Q9NVE4 849 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 WWC3Q9ULE0 1092 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 VPS9D1Q9Y2B5 631 aa8.7□□□□□ -1.02
RNU6-943P-201ENST00000516960 TNNI2P48788 182 aa8.69□□□□□ -1.02
RNU6-943P-201ENST00000516960 DMRTA1Q5VZB9 504 aa8.69□□□□□ -1.02
RNU6-943P-201ENST00000516960 PMFBP1Q8TBY8 1022 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms