RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 ELL2O00472 640 aaPredicted RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 RGL2O15211 777 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 SOX12O15370 315 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ABCB7O75027 752 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 SEC24BO95487 1268 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 CAVIN2O95810 425 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 PRKAR2BP31323 418 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 KCNJ4P48050 445 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 AMPHP49418 695 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 NEK4P51957 841 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 TPM4P67936 248 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 OS9Q13438 667 aaPredicted RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 SAFB2Q14151 953 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 LRRFIP1Q32MZ4 808 aaKnown RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 SLC4A10Q6U841 1118 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 LRSAM1Q6UWE0 723 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ERC1Q8IUD2 1116 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 AEBP1Q8IUX7 1158 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 DRC7Q8IY82 874 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 CNTROBQ8N137 903 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 PDCL2Q8N4E4 241 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 MRPL50Q8N5N7 158 aaKnown RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 GAS2L2Q8NHY3 880 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 TSR2Q969E8 191 aaKnown RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 RILPL2Q969X0 211 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 PRAM1Q96QH2 718 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ARID3AQ99856 593 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 USP26Q9BXU7 913 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 LRRCC1Q9C099 1032 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 TSPY26PQ9H489 355 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ANTXR1Q9H6X2 564 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 CABP1Q9NZU7 370 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 BCCIPQ9P287 314 aaKnown RBP eCLIP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 EID1Q9Y6B2 187 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 CCDC61Q9Y6R9 512 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 PLA2R1Q13018 1463 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ZNF518AQ6AHZ1 1483 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 MAGI2Q86UL8 1455 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 QRICH2Q9H0J4 1663 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ZCCHC11Q5TAX3 1644 aaKnown RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 MADDQ8WXG6 1647 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 PPLO60437 1756 aa2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 IBTKQ9P2D0 1353 aaPredicted RBP2.49□□□□□ -2.01
RNU1-40P-201ENST00000516816 ATP7AQ04656 1500 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 MINK1Q8N4C8 1332 aaPredicted RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 ERVK-7P63135 1459 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 DYNC1I1O14576 645 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 OFD1O75665 1012 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 BAG4O95429 457 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 DDX58O95786 925 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TUBB4AP04350 444 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CCDC192P0DO97 292 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 NLRP6P59044 892 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 ZNF445P59923 1031 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 FGD1P98174 961 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 ATP8B2P98198 1209 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PDAP1Q13442 181 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 IDI1Q13907 227 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TTC22Q5TAA0 569 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TAF3Q5VWG9 929 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CAVIN1Q6NZI2 390 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 SASS6Q6UVJ0 657 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TBC1D9Q6ZT07 1266 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PLEKHM2Q8IWE5 1019 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CLASRPQ8N2M8 674 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 ANKRD44Q8N8A2 993 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CCDC34Q96HJ3 373 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PKNOX2Q96KN3 472 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PRIMPOLQ96LW4 560 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PLEKHF1Q96S99 279 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 PPP1R9BQ96SB3 815 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 NAT10Q9H0A0 1025 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CFAP45Q9UL16 551 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 NOL7Q9UMY1 257 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TRIM35Q9UPQ4 493 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 SMC3Q9UQE7 1217 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 USP32Q8NFA0 1604 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 RNF17Q9BXT8 1623 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 SETD1BQ9UPS6 1966 aaKnown RBP2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 ZFYVE9O95405 1425 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 NOS1P29475 1434 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 CD109Q6YHK3 1445 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TRAPPC8Q9Y2L5 1435 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TCHHQ07283 1943 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 KIAA0232Q92628 1395 aa2.48□□□□□ -2.01
RNU1-40P-201ENST00000516816 TTC21BQ7Z4L5 1316 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 MED14O60244 1454 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 DEPDC5O75140 1603 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 CLTCL1P53675 1640 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 MYO3AQ8NEV4 1616 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 GNAT3A8MTJ3 354 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 GOLGA6L19H0YKK7 550 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 APBB1O00213 710 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 WASLO00401 505 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 CTAGE5O15320 804 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 CCP110O43303 1012 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 ZNF500O60304 480 aaPredicted RBP2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 NEMFO60524 1076 aa2.47□□□□□ -2.01
RNU1-40P-201ENST00000516816 SURF6O75683 361 aaKnown RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms