RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 ITGA6P23229 1130 aa6.89□□□□□ -1.31
RNU4-49P-201ENST00000516080 GPC1P35052 558 aa6.89□□□□□ -1.31
RNU4-49P-201ENST00000516080 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
RNU4-49P-201ENST00000516080 TBC1D2BQ9UPU7 963 aa6.89□□□□□ -1.31
RNU4-49P-201ENST00000516080 A0A1W2PRU2 124 aa6.88□□□□□ -1.31
RNU4-49P-201ENST00000516080 MEN1O00255 615 aa6.88□□□□□ -1.31
RNU4-49P-201ENST00000516080 EIF4G2P78344 907 aaKnown RBP eCLIP6.88□□□□□ -1.31
RNU4-49P-201ENST00000516080 NLRP3Q96P20 1036 aa6.88□□□□□ -1.31
RNU4-49P-201ENST00000516080 CEP126Q9P2H0 1117 aa6.88□□□□□ -1.31
RNU4-49P-201ENST00000516080 SENP3-EIF4A1A0A087X0R7 540 aa6.87□□□□□ -1.31
RNU4-49P-201ENST00000516080 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
RNU4-49P-201ENST00000516080 GPR161Q8N6U8 529 aaKnown RBP6.87□□□□□ -1.31
RNU4-49P-201ENST00000516080 TRAK2O60296 914 aa6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 MYCP01106 439 aaPredicted RBP6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 PRKCSHP14314 528 aaPredicted RBP6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 SCTRP47872 440 aa6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 CLN3Q13286 438 aa6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 PRICKLE2Q7Z3G6 844 aa6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 VWA5B2Q8N398 1253 aa6.86□□□□□ -1.31
RNU4-49P-201ENST00000516080 CDC14CA4D256 554 aa6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 SLC27A3Q5K4L6 730 aa6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
RNU4-49P-201ENST00000516080 GNRH1P01148 92 aa6.84□□□□□ -1.31
RNU4-49P-201ENST00000516080 IRF5Q13568 498 aa6.84□□□□□ -1.31
RNU4-49P-201ENST00000516080 GMCL1Q96IK5 515 aa6.84□□□□□ -1.31
RNU4-49P-201ENST00000516080 GDPD2Q9HCC8 539 aa6.84□□□□□ -1.31
RNU4-49P-201ENST00000516080 RHOQP17081 205 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 ABL2P42684 1182 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 KRT76Q01546 638 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 WASHC4Q2M389 1173 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 SLFNL1Q499Z3 407 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 CCDC85AQ96PX6 553 aaPredicted RBP6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 GRIP2Q9C0E4 1043 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 ARHGEF10LQ9HCE6 1279 aa6.83□□□□□ -1.32
RNU4-49P-201ENST00000516080 USP4Q13107 963 aa6.82□□□□□ -1.32
RNU4-49P-201ENST00000516080 DOLKQ9UPQ8 538 aa6.82□□□□□ -1.32
RNU4-49P-201ENST00000516080 DYRK1BQ9Y463 629 aa6.82□□□□□ -1.32
RNU4-49P-201ENST00000516080 SPATA31C2B4DYI2 1134 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 POU4F2Q12837 409 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 MCM6Q14566 821 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 RNFT1Q5M7Z0 435 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 NBPF10Q6P3W6 841 aaKnown RBP6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 RNF135Q8IUD6 432 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 TRIM22Q8IYM9 498 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 NBPF15Q8N660 670 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 SIRT1Q96EB6 747 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 CDCA7Q9BWT1 371 aaPredicted RBP6.81□□□□□ -1.32
RNU4-49P-201ENST00000516080 SOX11P35716 441 aa6.8□□□□□ -1.32
RNU4-49P-201ENST00000516080 VAC14Q08AM6 782 aa6.8□□□□□ -1.32
RNU4-49P-201ENST00000516080 ESCO1Q5FWF5 840 aa6.8□□□□□ -1.32
RNU4-49P-201ENST00000516080 CNKSR1Q969H4 720 aa6.8□□□□□ -1.32
RNU4-49P-201ENST00000516080 H7C1W4 665 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 SLURP2P0DP57 97 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 GTF2E1P29083 439 aaPredicted RBP6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 RIPOR1Q6ZS17 1223 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 TAS1R3Q7RTX0 852 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 RAB6BQ9NRW1 208 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 CUEDC1Q9NWM3 386 aaPredicted RBP6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 CHIC2Q9UKJ5 165 aa6.79□□□□□ -1.32
RNU4-49P-201ENST00000516080 WASLO00401 505 aaPredicted RBP6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 IL2RAP01589 272 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 CENPCQ03188 943 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 SEMA3FQ13275 785 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 MAP7D1Q3KQU3 841 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 ZNF837Q96EG3 531 aaPredicted RBP6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 XAGE2Q96GT9 111 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 GAS2L1Q99501 681 aaPredicted RBP6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 TIMMDC1Q9NPL8 285 aa6.78□□□□□ -1.32
RNU4-49P-201ENST00000516080 TSGA10IPQ3SY00 556 aa6.77□□□□□ -1.33
RNU4-49P-201ENST00000516080 WWC1Q8IX03 1113 aa6.77□□□□□ -1.33
RNU4-49P-201ENST00000516080 ZSCAN10Q96SZ4 725 aaPredicted RBP6.77□□□□□ -1.33
RNU4-49P-201ENST00000516080 HRH3Q9Y5N1 445 aa6.77□□□□□ -1.33
RNU4-49P-201ENST00000516080 F11P03951 625 aa6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 SRSF11Q05519 484 aaKnown RBP6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 DBN1Q16643 649 aa6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 OXLD1Q5BKU9 147 aa6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 GNASQ5JWF2 1037 aa6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 COG6Q9Y2V7 657 aa6.76□□□□□ -1.33
RNU4-49P-201ENST00000516080 ADAMTS2O95450 1211 aa6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 GAS6Q14393 721 aa6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 ZNF385CQ66K41 422 aaPredicted RBP6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 SVOPQ8N4V2 548 aa6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 TRERF1Q96PN7 1200 aa6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 FHDC1Q9C0D6 1143 aaPredicted RBP6.75□□□□□ -1.33
RNU4-49P-201ENST00000516080 A0A1B0GTH6 734 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 RAD21O60216 631 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 FLIIQ13045 1269 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 PLPP7Q8NBV4 271 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 GTPBP3Q969Y2 492 aaKnown RBP6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
RNU4-49P-201ENST00000516080 RNF225M0QZC1 329 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms