RNA–Protein interactions for RNA: ENST00000515815.5

SDHA-219, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 704 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-219ENST00000515815 FBLN1P23142 703 aa16.62■□□□□ 0.25
SDHA-219ENST00000515815 COL24A1Q17RW2 1714 aa16.62■□□□□ 0.25
SDHA-219ENST00000515815 NBPF14Q5TI25 921 aa16.61■□□□□ 0.25
SDHA-219ENST00000515815 PLSCR1O15162 318 aa16.6■□□□□ 0.25
SDHA-219ENST00000515815 EMILIN1Q9Y6C2 1016 aa16.59■□□□□ 0.25
SDHA-219ENST00000515815 PTF1AQ7RTS3 328 aa16.58■□□□□ 0.24
SDHA-219ENST00000515815 USHBP1Q8N6Y0 703 aa16.58■□□□□ 0.24
SDHA-219ENST00000515815 ACSBG1Q96GR2 724 aa16.58■□□□□ 0.24
SDHA-219ENST00000515815 SCN11AQ9UI33 1791 aa16.58■□□□□ 0.24
SDHA-219ENST00000515815 PCDH11XQ9BZA7 1347 aa16.57■□□□□ 0.24
SDHA-219ENST00000515815 PCDH11YQ9BZA8 1340 aa16.57■□□□□ 0.24
SDHA-219ENST00000515815 RAPGEF4Q8WZA2 1011 aa16.57■□□□□ 0.24
SDHA-219ENST00000515815 HSP90AB2PQ58FF8 381 aa16.56■□□□□ 0.24
SDHA-219ENST00000515815 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
SDHA-219ENST00000515815 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
SDHA-219ENST00000515815 NBPF6Q5VWK0 638 aa16.55■□□□□ 0.24
SDHA-219ENST00000515815 NBPF4Q96M43 638 aa16.55■□□□□ 0.24
SDHA-219ENST00000515815 ANO8Q9HCE9 1232 aaPredicted RBP16.55■□□□□ 0.24
SDHA-219ENST00000515815 C4BP0C0L5 1744 aa16.55■□□□□ 0.24
SDHA-219ENST00000515815 COL5A3P25940 1745 aaPredicted RBP16.55■□□□□ 0.24
SDHA-219ENST00000515815 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
SDHA-219ENST00000515815 ZNF831Q5JPB2 1677 aa16.54■□□□□ 0.24
SDHA-219ENST00000515815 KCNQ2O43526 872 aa16.54■□□□□ 0.24
SDHA-219ENST00000515815 TATP17735 454 aaPredicted RBP16.54■□□□□ 0.24
SDHA-219ENST00000515815 DDX54Q8TDD1 881 aaKnown RBP16.54■□□□□ 0.24
SDHA-219ENST00000515815 PLEKHG2Q9H7P9 1386 aa16.53■□□□□ 0.24
SDHA-219ENST00000515815 TXNRD1Q16881 649 aa16.53■□□□□ 0.24
SDHA-219ENST00000515815 ZCRB1Q8TBF4 217 aaKnown RBP16.53■□□□□ 0.24
SDHA-219ENST00000515815 PANK3Q9H999 370 aa16.53■□□□□ 0.24
SDHA-219ENST00000515815 WASHC2AQ641Q2 1341 aa16.52■□□□□ 0.24
SDHA-219ENST00000515815 TNNT2P45379 298 aaPredicted RBP16.51■□□□□ 0.23
SDHA-219ENST00000515815 SYTL4Q96C24 671 aaPredicted RBP16.51■□□□□ 0.23
SDHA-219ENST00000515815 STK32BQ9NY57 414 aa16.51■□□□□ 0.23
SDHA-219ENST00000515815 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
SDHA-219ENST00000515815 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
SDHA-219ENST00000515815 POLKQ9UBT6 870 aa16.49■□□□□ 0.23
SDHA-219ENST00000515815 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
SDHA-219ENST00000515815 KNSTRNQ9Y448 316 aa16.48■□□□□ 0.23
SDHA-219ENST00000515815 TJP1Q07157 1748 aa16.47■□□□□ 0.23
SDHA-219ENST00000515815 MORC1Q86VD1 984 aa16.46■□□□□ 0.23
SDHA-219ENST00000515815 PROM2Q8N271 834 aa16.46■□□□□ 0.23
SDHA-219ENST00000515815 SPON1Q9HCB6 807 aa16.46■□□□□ 0.23
SDHA-219ENST00000515815 ADAMTS7Q9UKP4 1686 aa16.46■□□□□ 0.23
SDHA-219ENST00000515815 IGSF1Q8N6C5 1336 aa16.45■□□□□ 0.22
SDHA-219ENST00000515815 EIF4A2Q14240 407 aaKnown RBP16.45■□□□□ 0.22
SDHA-219ENST00000515815 SLC15A2Q16348 729 aa16.45■□□□□ 0.22
SDHA-219ENST00000515815 SLC27A3Q5K4L6 730 aa16.45■□□□□ 0.22
SDHA-219ENST00000515815 PPP1R1BQ9UD71 204 aaPredicted RBP16.45■□□□□ 0.22
SDHA-219ENST00000515815 CHD4Q14839 1912 aa16.45■□□□□ 0.22
SDHA-219ENST00000515815 SIPA1L3O60292 1781 aaPredicted RBP16.44■□□□□ 0.22
SDHA-219ENST00000515815 PALLDQ8WX93 1383 aa16.44■□□□□ 0.22
SDHA-219ENST00000515815 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
SDHA-219ENST00000515815 EYA1Q99502 592 aa16.44■□□□□ 0.22
SDHA-219ENST00000515815 UBR2Q8IWV8 1755 aa16.43■□□□□ 0.22
SDHA-219ENST00000515815 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
SDHA-219ENST00000515815 COL3A1P02461 1466 aaPredicted RBP16.42■□□□□ 0.22
SDHA-219ENST00000515815 CYP27B1O15528 508 aa16.41■□□□□ 0.22
SDHA-219ENST00000515815 ZNF827Q17R98 1081 aa16.41■□□□□ 0.22
SDHA-219ENST00000515815 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
SDHA-219ENST00000515815 ZBTB7AO95365 584 aa16.4■□□□□ 0.22
SDHA-219ENST00000515815 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
SDHA-219ENST00000515815 CCNL1Q9UK58 526 aaPredicted RBP16.4■□□□□ 0.22
SDHA-219ENST00000515815 MRC1P22897 1456 aa16.4■□□□□ 0.22
SDHA-219ENST00000515815 KDRP35968 1356 aa16.39■□□□□ 0.21
SDHA-219ENST00000515815 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
SDHA-219ENST00000515815 PDGFDQ9GZP0 370 aaPredicted RBP16.39■□□□□ 0.21
SDHA-219ENST00000515815 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
SDHA-219ENST00000515815 KDM6AO15550 1401 aaPredicted RBP16.38■□□□□ 0.21
SDHA-219ENST00000515815 MTFR1LQ9H019 292 aa16.38■□□□□ 0.21
SDHA-219ENST00000515815 DLG5Q8TDM6 1919 aa16.37■□□□□ 0.21
SDHA-219ENST00000515815 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
SDHA-219ENST00000515815 PHKG2P15735 406 aa16.36■□□□□ 0.21
SDHA-219ENST00000515815 IFNL2Q8IZJ0 200 aa16.36■□□□□ 0.21
SDHA-219ENST00000515815 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
SDHA-219ENST00000515815 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
SDHA-219ENST00000515815 KCNQ4P56696 695 aa16.35■□□□□ 0.21
SDHA-219ENST00000515815 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
SDHA-219ENST00000515815 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
SDHA-219ENST00000515815 KIF13BQ9NQT8 1826 aa16.35■□□□□ 0.21
SDHA-219ENST00000515815 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
SDHA-219ENST00000515815 SMARCC1Q92922 1105 aaPredicted RBP16.34■□□□□ 0.21
SDHA-219ENST00000515815 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
SDHA-219ENST00000515815 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.21
SDHA-219ENST00000515815 PTGER2P43116 358 aa16.33■□□□□ 0.2
SDHA-219ENST00000515815 AEBP1Q8IUX7 1158 aa16.33■□□□□ 0.2
SDHA-219ENST00000515815 LAMB4A4D0S4 1761 aa16.32■□□□□ 0.2
SDHA-219ENST00000515815 HSP90AB1P08238 724 aaKnown RBP16.32■□□□□ 0.2
SDHA-219ENST00000515815 HMGB2P26583 209 aaKnown RBP16.32■□□□□ 0.2
SDHA-219ENST00000515815 ZNF530Q6P9A1 599 aaPredicted RBP16.32■□□□□ 0.2
SDHA-219ENST00000515815 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
SDHA-219ENST00000515815 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
SDHA-219ENST00000515815 PER1O15534 1290 aaPredicted RBP16.31■□□□□ 0.2
SDHA-219ENST00000515815 AMOTQ4VCS5 1084 aa16.31■□□□□ 0.2
SDHA-219ENST00000515815 PLEKHO1Q53GL0 409 aaPredicted RBP16.31■□□□□ 0.2
SDHA-219ENST00000515815 C1orf141Q5JVX7 400 aa16.31■□□□□ 0.2
SDHA-219ENST00000515815 SULT6B1Q6IMI4 303 aa16.31■□□□□ 0.2
SDHA-219ENST00000515815 IL13P35225 146 aa16.3■□□□□ 0.2
SDHA-219ENST00000515815 MTHFSP49914 203 aa16.3■□□□□ 0.2
SDHA-219ENST00000515815 PIGBQ92521 554 aa16.3■□□□□ 0.2
SDHA-219ENST00000515815 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms