RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 SLC16A10Q8TF71 515 aa22.54■■□□□ 1.2
SDHC-209ENST00000515731 FYB1O15117 783 aa22.53■■□□□ 1.2
SDHC-209ENST00000515731 FBLN1P23142 703 aa22.53■■□□□ 1.2
SDHC-209ENST00000515731 ARXQ96QS3 562 aa22.53■■□□□ 1.2
SDHC-209ENST00000515731 MEGF6O75095 1541 aa22.52■■□□□ 1.2
SDHC-209ENST00000515731 NSD2O96028 1365 aa22.52■■□□□ 1.2
SDHC-209ENST00000515731 ZCRB1Q8TBF4 217 aaKnown RBP22.52■■□□□ 1.2
SDHC-209ENST00000515731 CGNL1Q0VF96 1302 aa22.52■■□□□ 1.2
SDHC-209ENST00000515731 TMF1P82094 1093 aa22.51■■□□□ 1.19
SDHC-209ENST00000515731 PRIM1P49642 420 aaKnown RBP22.5■■□□□ 1.19
SDHC-209ENST00000515731 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
SDHC-209ENST00000515731 NBPF6Q5VWK0 638 aa22.49■■□□□ 1.19
SDHC-209ENST00000515731 NBPF4Q96M43 638 aa22.49■■□□□ 1.19
SDHC-209ENST00000515731 USP47Q96K76 1375 aa22.49■■□□□ 1.19
SDHC-209ENST00000515731 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
SDHC-209ENST00000515731 PNPLA7Q6ZV29 1317 aa22.47■■□□□ 1.19
SDHC-209ENST00000515731 INSRP06213 1382 aa22.47■■□□□ 1.19
SDHC-209ENST00000515731 RRS1Q15050 365 aaKnown RBP22.46■■□□□ 1.19
SDHC-209ENST00000515731 CDCA8Q53HL2 280 aa22.46■■□□□ 1.19
SDHC-209ENST00000515731 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
SDHC-209ENST00000515731 SMG6Q86US8 1419 aaKnown RBP22.45■■□□□ 1.18
SDHC-209ENST00000515731 TAF1LQ8IZX4 1826 aa22.45■■□□□ 1.18
SDHC-209ENST00000515731 SYTL4Q96C24 671 aaPredicted RBP22.44■■□□□ 1.18
SDHC-209ENST00000515731 ANKRD26Q9UPS8 1709 aa22.43■■□□□ 1.18
SDHC-209ENST00000515731 FLT4P35916 1363 aa22.43■■□□□ 1.18
SDHC-209ENST00000515731 ITGB4P16144 1822 aa22.43■■□□□ 1.18
SDHC-209ENST00000515731 C5P01031 1676 aa22.42■■□□□ 1.18
SDHC-209ENST00000515731 ZNF784Q8NCA9 323 aaPredicted RBP22.42■■□□□ 1.18
SDHC-209ENST00000515731 TFCP2L1Q9NZI6 479 aa22.42■■□□□ 1.18
SDHC-209ENST00000515731 PKD1L3Q7Z443 1732 aa22.42■■□□□ 1.18
SDHC-209ENST00000515731 POLD1P28340 1107 aa22.41■■□□□ 1.18
SDHC-209ENST00000515731 TRIM26Q12899 539 aaPredicted RBP22.41■■□□□ 1.18
SDHC-209ENST00000515731 HSP90AB2PQ58FF8 381 aa22.41■■□□□ 1.18
SDHC-209ENST00000515731 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
SDHC-209ENST00000515731 MAP2P11137 1827 aaKnown RBP22.41■■□□□ 1.18
SDHC-209ENST00000515731 NCAPD2Q15021 1401 aa22.4■■□□□ 1.18
SDHC-209ENST00000515731 HMGB2P26583 209 aaKnown RBP22.4■■□□□ 1.18
SDHC-209ENST00000515731 KCNQ4P56696 695 aa22.4■■□□□ 1.18
SDHC-209ENST00000515731 CCNL1Q9UK58 526 aaPredicted RBP22.4■■□□□ 1.18
SDHC-209ENST00000515731 TATP17735 454 aaPredicted RBP22.39■■□□□ 1.17
SDHC-209ENST00000515731 USHBP1Q8N6Y0 703 aa22.39■■□□□ 1.17
SDHC-209ENST00000515731 CARD14Q9BXL6 1004 aa22.39■■□□□ 1.17
SDHC-209ENST00000515731 TIMELESSQ9UNS1 1208 aa22.39■■□□□ 1.17
SDHC-209ENST00000515731 PCDH11XQ9BZA7 1347 aa22.38■■□□□ 1.17
SDHC-209ENST00000515731 PCDH11YQ9BZA8 1340 aa22.38■■□□□ 1.17
SDHC-209ENST00000515731 TOGARAM1Q9Y4F4 1720 aa22.38■■□□□ 1.17
SDHC-209ENST00000515731 COL23A1Q86Y22 540 aaPredicted RBP22.34■■□□□ 1.17
SDHC-209ENST00000515731 NSD3Q9BZ95 1437 aa22.33■■□□□ 1.17
SDHC-209ENST00000515731 CYP27B1O15528 508 aa22.33■■□□□ 1.17
SDHC-209ENST00000515731 NKX1-1Q15270 411 aaPredicted RBP22.32■■□□□ 1.16
SDHC-209ENST00000515731 GPR162Q16538 588 aa22.32■■□□□ 1.16
SDHC-209ENST00000515731 UBR3Q6ZT12 1888 aa22.31■■□□□ 1.16
SDHC-209ENST00000515731 FLAD1Q8NFF5 587 aa22.31■■□□□ 1.16
SDHC-209ENST00000515731 EMILIN1Q9Y6C2 1016 aa22.31■■□□□ 1.16
SDHC-209ENST00000515731 C4BP0C0L5 1744 aa22.31■■□□□ 1.16
SDHC-209ENST00000515731 WASHC2AQ641Q2 1341 aa22.31■■□□□ 1.16
SDHC-209ENST00000515731 PALLDQ8WX93 1383 aa22.3■■□□□ 1.16
SDHC-209ENST00000515731 CLSPNQ9HAW4 1339 aa22.29■■□□□ 1.16
SDHC-209ENST00000515731 NLGN2Q8NFZ4 835 aa22.28■■□□□ 1.16
SDHC-209ENST00000515731 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
SDHC-209ENST00000515731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.28■■□□□ 1.16
SDHC-209ENST00000515731 MPRIPQ6WCQ1 1025 aa22.27■■□□□ 1.16
SDHC-209ENST00000515731 PLEKHG2Q9H7P9 1386 aa22.26■■□□□ 1.15
SDHC-209ENST00000515731 KLHL34Q8N239 644 aa22.25■■□□□ 1.15
SDHC-209ENST00000515731 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
SDHC-209ENST00000515731 MSH5O43196 834 aa22.24■■□□□ 1.15
SDHC-209ENST00000515731 PIGBQ92521 554 aa22.24■■□□□ 1.15
SDHC-209ENST00000515731 EYA1Q99502 592 aa22.24■■□□□ 1.15
SDHC-209ENST00000515731 POLKQ9UBT6 870 aa22.24■■□□□ 1.15
SDHC-209ENST00000515731 GRIN3BO60391 1043 aa22.23■■□□□ 1.15
SDHC-209ENST00000515731 CD2APQ9Y5K6 639 aa22.23■■□□□ 1.15
SDHC-209ENST00000515731 C1QTNF8P60827 252 aa22.22■■□□□ 1.15
SDHC-209ENST00000515731 ZNF831Q5JPB2 1677 aa22.22■■□□□ 1.15
SDHC-209ENST00000515731 YBX3P16989 372 aaKnown RBP eCLIP22.2■■□□□ 1.14
SDHC-209ENST00000515731 PPM1GO15355 546 aaPredicted RBP22.19■■□□□ 1.14
SDHC-209ENST00000515731 MSL1Q68DK7 614 aa22.19■■□□□ 1.14
SDHC-209ENST00000515731 IFNL2Q8IZJ0 200 aa22.18■■□□□ 1.14
SDHC-209ENST00000515731 PELP1Q8IZL8 1130 aaKnown RBP22.18■■□□□ 1.14
SDHC-209ENST00000515731 AK7Q96M32 723 aa22.18■■□□□ 1.14
SDHC-209ENST00000515731 LOC102724428A0A0B4J2F2 783 aa22.17■■□□□ 1.14
SDHC-209ENST00000515731 PHKG2P15735 406 aa22.17■■□□□ 1.14
SDHC-209ENST00000515731 SIK1P57059 783 aa22.17■■□□□ 1.14
SDHC-209ENST00000515731 AMIGO3Q86WK7 504 aa22.17■■□□□ 1.14
SDHC-209ENST00000515731 SSFA2P28290 1259 aa22.16■■□□□ 1.14
SDHC-209ENST00000515731 EIF4A2Q14240 407 aaKnown RBP22.15■■□□□ 1.14
SDHC-209ENST00000515731 TMOD3Q9NYL9 352 aa22.15■■□□□ 1.14
SDHC-209ENST00000515731 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.14■■□□□ 1.13
SDHC-209ENST00000515731 LINC00116Q8NCU8 138 aa22.14■■□□□ 1.13
SDHC-209ENST00000515731 KIF13BQ9NQT8 1826 aa22.14■■□□□ 1.13
SDHC-209ENST00000515731 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
SDHC-209ENST00000515731 ASAP1Q9ULH1 1129 aa22.13■■□□□ 1.13
SDHC-209ENST00000515731 COL5A3P25940 1745 aaPredicted RBP22.12■■□□□ 1.13
SDHC-209ENST00000515731 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
SDHC-209ENST00000515731 ITPK1Q13572 414 aa22.11■■□□□ 1.13
SDHC-209ENST00000515731 ATG3Q9NT62 314 aa22.11■■□□□ 1.13
SDHC-209ENST00000515731 ERVV-2B6SEH9 535 aa22.1■■□□□ 1.13
SDHC-209ENST00000515731 KDRP35968 1356 aa22.1■■□□□ 1.13
SDHC-209ENST00000515731 CEP350Q5VT06 3117 aa22.09■■□□□ 1.13
SDHC-209ENST00000515731 ATP6V1AP38606 617 aa22.09■■□□□ 1.13
SDHC-209ENST00000515731 EIF4G2P78344 907 aaKnown RBP eCLIP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms