RNA–Protein interactions for RNA: ENST00000515467.2

SDHAP3-202, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 3, humanhuman

BASIC

Gene SDHAP3, Length 728 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP3-202ENST00000515467 SPG7Q9UQ90 795 aa21.44■■□□□ 1.02
SDHAP3-202ENST00000515467 MEGF6O75095 1541 aa21.44■■□□□ 1.02
SDHAP3-202ENST00000515467 APBA3O96018 575 aa21.43■■□□□ 1.02
SDHAP3-202ENST00000515467 PPP2R1AP30153 589 aa21.43■■□□□ 1.02
SDHAP3-202ENST00000515467 DEFB132Q7Z7B7 95 aa21.42■■□□□ 1.02
SDHAP3-202ENST00000515467 PLEKHG2Q9H7P9 1386 aa21.42■■□□□ 1.02
SDHAP3-202ENST00000515467 PCDH11XQ9BZA7 1347 aa21.41■■□□□ 1.02
SDHAP3-202ENST00000515467 PCDH11YQ9BZA8 1340 aa21.41■■□□□ 1.02
SDHAP3-202ENST00000515467 RALBP1Q15311 655 aa21.41■■□□□ 1.02
SDHAP3-202ENST00000515467 RGPD2P0DJD1 1756 aa21.4■■□□□ 1.02
SDHAP3-202ENST00000515467 SRCAPQ6ZRS2 3230 aa21.4■■□□□ 1.02
SDHAP3-202ENST00000515467 SULT6B1Q6IMI4 303 aa21.39■■□□□ 1.01
SDHAP3-202ENST00000515467 PARD3Q8TEW0 1356 aa21.38■■□□□ 1.01
SDHAP3-202ENST00000515467 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
SDHAP3-202ENST00000515467 PLEKHO1Q53GL0 409 aaPredicted RBP21.38■■□□□ 1.01
SDHAP3-202ENST00000515467 AMOTQ4VCS5 1084 aa21.37■■□□□ 1.01
SDHAP3-202ENST00000515467 NUDCQ9Y266 331 aa21.37■■□□□ 1.01
SDHAP3-202ENST00000515467 PLSCR1O15162 318 aa21.36■■□□□ 1.01
SDHAP3-202ENST00000515467 ACSBG1Q96GR2 724 aa21.36■■□□□ 1.01
SDHAP3-202ENST00000515467 CAMKK2Q96RR4 588 aa21.36■■□□□ 1.01
SDHAP3-202ENST00000515467 RGPD1P0DJD0 1748 aa21.35■■□□□ 1.01
SDHAP3-202ENST00000515467 CYP27B1O15528 508 aa21.35■■□□□ 1.01
SDHAP3-202ENST00000515467 KCNQ2O43526 872 aa21.35■■□□□ 1.01
SDHAP3-202ENST00000515467 AEBP1Q8IUX7 1158 aa21.35■■□□□ 1.01
SDHAP3-202ENST00000515467 KDRP35968 1356 aa21.35■■□□□ 1.01
SDHAP3-202ENST00000515467 U2SURPO15042 1029 aaKnown RBP21.34■■□□□ 1.01
SDHAP3-202ENST00000515467 IFNL2Q8IZJ0 200 aa21.34■■□□□ 1.01
SDHAP3-202ENST00000515467 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
SDHAP3-202ENST00000515467 NKX1-1Q15270 411 aaPredicted RBP21.33■■□□□ 1.01
SDHAP3-202ENST00000515467 EZH2Q15910 746 aaKnown RBP21.32■■□□□ 1
SDHAP3-202ENST00000515467 PTF1AQ7RTS3 328 aa21.32■■□□□ 1
SDHAP3-202ENST00000515467 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
SDHAP3-202ENST00000515467 HMOX1P09601 288 aa21.31■■□□□ 1
SDHAP3-202ENST00000515467 PHKG2P15735 406 aa21.3■■□□□ 1
SDHAP3-202ENST00000515467 SYTL4Q96C24 671 aaPredicted RBP21.3■■□□□ 1
SDHAP3-202ENST00000515467 COL3A1P02461 1466 aaPredicted RBP21.3■■□□□ 1
SDHAP3-202ENST00000515467 ZNF530Q6P9A1 599 aaPredicted RBP21.29■■□□□ 1
SDHAP3-202ENST00000515467 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
SDHAP3-202ENST00000515467 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
SDHAP3-202ENST00000515467 TNS1Q9HBL0 1735 aaKnown RBP21.27■■□□□ 1
SDHAP3-202ENST00000515467 U2AF1L5P0DN76 240 aaPredicted RBP21.26■□□□□ 0.99
SDHAP3-202ENST00000515467 U2AF1Q01081 240 aaKnown RBP eCLIP21.26■□□□□ 0.99
SDHAP3-202ENST00000515467 DCAF5Q96JK2 942 aa21.26■□□□□ 0.99
SDHAP3-202ENST00000515467 SBF2Q86WG5 1849 aa21.26■□□□□ 0.99
SDHAP3-202ENST00000515467 FCHSD2O94868 740 aa21.25■□□□□ 0.99
SDHAP3-202ENST00000515467 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
SDHAP3-202ENST00000515467 PKD1L3Q7Z443 1732 aa21.25■□□□□ 0.99
SDHAP3-202ENST00000515467 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
SDHAP3-202ENST00000515467 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 TXNRD1Q16881 649 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 AKAP4Q5JQC9 854 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 NHSQ6T4R5 1651 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 SHANK3Q9BYB0 1731 aa21.23■□□□□ 0.99
SDHAP3-202ENST00000515467 PROM2Q8N271 834 aa21.22■□□□□ 0.99
SDHAP3-202ENST00000515467 KAT6BQ8WYB5 2073 aa21.22■□□□□ 0.99
SDHAP3-202ENST00000515467 HMGB2P26583 209 aaKnown RBP21.21■□□□□ 0.99
SDHAP3-202ENST00000515467 GAS2L2Q8NHY3 880 aa21.21■□□□□ 0.99
SDHAP3-202ENST00000515467 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
SDHAP3-202ENST00000515467 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
SDHAP3-202ENST00000515467 TMOD3Q9NYL9 352 aa21.21■□□□□ 0.99
SDHAP3-202ENST00000515467 PRKAR2BP31323 418 aa21.2■□□□□ 0.98
SDHAP3-202ENST00000515467 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
SDHAP3-202ENST00000515467 SLC27A3Q5K4L6 730 aa21.2■□□□□ 0.98
SDHAP3-202ENST00000515467 PIGBQ92521 554 aa21.2■□□□□ 0.98
SDHAP3-202ENST00000515467 PNNQ9H307 717 aaKnown RBP21.2■□□□□ 0.98
SDHAP3-202ENST00000515467 NEFMP07197 916 aa21.18■□□□□ 0.98
SDHAP3-202ENST00000515467 CABP4P57796 275 aa21.18■□□□□ 0.98
SDHAP3-202ENST00000515467 PSDA5PKW4 1024 aaPredicted RBP21.17■□□□□ 0.98
SDHAP3-202ENST00000515467 RGPD3A6NKT7 1758 aaPredicted RBP21.15■□□□□ 0.98
SDHAP3-202ENST00000515467 RGPD4Q7Z3J3 1758 aa21.15■□□□□ 0.98
SDHAP3-202ENST00000515467 ANP32CO43423 234 aa21.15■□□□□ 0.98
SDHAP3-202ENST00000515467 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
SDHAP3-202ENST00000515467 GNAT3A8MTJ3 354 aa21.14■□□□□ 0.97
SDHAP3-202ENST00000515467 R3HDM1Q15032 1099 aaKnown RBP21.14■□□□□ 0.97
SDHAP3-202ENST00000515467 DOT1LQ8TEK3 1739 aa21.14■□□□□ 0.97
SDHAP3-202ENST00000515467 BTAF1O14981 1849 aa21.13■□□□□ 0.97
SDHAP3-202ENST00000515467 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
SDHAP3-202ENST00000515467 STK32BQ9NY57 414 aa21.13■□□□□ 0.97
SDHAP3-202ENST00000515467 CCNL1Q9UK58 526 aaPredicted RBP21.13■□□□□ 0.97
SDHAP3-202ENST00000515467 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
SDHAP3-202ENST00000515467 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
SDHAP3-202ENST00000515467 LGR6Q9HBX8 967 aa21.12■□□□□ 0.97
SDHAP3-202ENST00000515467 LRRC4BQ9NT99 713 aa21.12■□□□□ 0.97
SDHAP3-202ENST00000515467 PALLDQ8WX93 1383 aa21.11■□□□□ 0.97
SDHAP3-202ENST00000515467 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
SDHAP3-202ENST00000515467 ASAP1Q9ULH1 1129 aa21.11■□□□□ 0.97
SDHAP3-202ENST00000515467 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
SDHAP3-202ENST00000515467 RREB1Q92766 1687 aa21.1■□□□□ 0.97
SDHAP3-202ENST00000515467 SLC52A2Q9HAB3 445 aa21.1■□□□□ 0.97
SDHAP3-202ENST00000515467 ATG3Q9NT62 314 aa21.1■□□□□ 0.97
SDHAP3-202ENST00000515467 HTATSF1O43719 755 aaKnown RBP21.09■□□□□ 0.97
SDHAP3-202ENST00000515467 SLC15A2Q16348 729 aa21.09■□□□□ 0.97
SDHAP3-202ENST00000515467 PLEKHF1Q96S99 279 aa21.09■□□□□ 0.97
SDHAP3-202ENST00000515467 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
SDHAP3-202ENST00000515467 ANO8Q9HCE9 1232 aaPredicted RBP21.08■□□□□ 0.97
SDHAP3-202ENST00000515467 MAPK8IP3Q9UPT6 1336 aa21.07■□□□□ 0.96
SDHAP3-202ENST00000515467 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
SDHAP3-202ENST00000515467 SIK1P57059 783 aa21.07■□□□□ 0.96
SDHAP3-202ENST00000515467 IL17REQ8NFR9 667 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms