RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 USHBP1Q8N6Y0 703 aa33.54■■■□□ 2.96
CCND3-221ENST00000514588 SYTL4Q96C24 671 aaPredicted RBP33.54■■■□□ 2.96
CCND3-221ENST00000514588 SGIP1Q9BQI5 828 aa33.54■■■□□ 2.96
CCND3-221ENST00000514588 SMG6Q86US8 1419 aaKnown RBP33.53■■■□□ 2.96
CCND3-221ENST00000514588 INSRP06213 1382 aa33.53■■■□□ 2.96
CCND3-221ENST00000514588 DCAF8L1A6NGE4 600 aa33.53■■■□□ 2.96
CCND3-221ENST00000514588 HSP90AB2PQ58FF8 381 aa33.53■■■□□ 2.96
CCND3-221ENST00000514588 SLC27A3Q5K4L6 730 aa33.53■■■□□ 2.96
CCND3-221ENST00000514588 NSD2O96028 1365 aa33.52■■■□□ 2.96
CCND3-221ENST00000514588 DOT1LQ8TEK3 1739 aa33.52■■■□□ 2.96
CCND3-221ENST00000514588 YY1P25490 414 aa33.51■■■□□ 2.95
CCND3-221ENST00000514588 AKT1S1Q96B36 256 aa33.51■■■□□ 2.95
CCND3-221ENST00000514588 CGNL1Q0VF96 1302 aa33.51■■■□□ 2.95
CCND3-221ENST00000514588 NSD3Q9BZ95 1437 aa33.5■■■□□ 2.95
CCND3-221ENST00000514588 FLT4P35916 1363 aa33.49■■■□□ 2.95
CCND3-221ENST00000514588 KIF24Q5T7B8 1368 aa33.49■■■□□ 2.95
CCND3-221ENST00000514588 CLSPNQ9HAW4 1339 aa33.49■■■□□ 2.95
CCND3-221ENST00000514588 RAPGEF4Q8WZA2 1011 aa33.48■■■□□ 2.95
CCND3-221ENST00000514588 FHDC1Q9C0D6 1143 aaPredicted RBP33.48■■■□□ 2.95
CCND3-221ENST00000514588 PCGF6Q9BYE7 350 aa33.47■■■□□ 2.95
CCND3-221ENST00000514588 KCNQ4P56696 695 aa33.46■■■□□ 2.95
CCND3-221ENST00000514588 SYT17Q9BSW7 474 aa33.46■■■□□ 2.95
CCND3-221ENST00000514588 TATP17735 454 aaPredicted RBP33.44■■■□□ 2.94
CCND3-221ENST00000514588 EMILIN1Q9Y6C2 1016 aa33.44■■■□□ 2.94
CCND3-221ENST00000514588 ARXQ96QS3 562 aa33.42■■■□□ 2.94
CCND3-221ENST00000514588 LY75O60449 1722 aa33.42■■■□□ 2.94
CCND3-221ENST00000514588 PNPLA7Q6ZV29 1317 aa33.4■■■□□ 2.94
CCND3-221ENST00000514588 QSER1Q2KHR3 1735 aa33.39■■■□□ 2.94
CCND3-221ENST00000514588 PCDH11XQ9BZA7 1347 aa33.38■■■□□ 2.93
CCND3-221ENST00000514588 PCDH11YQ9BZA8 1340 aa33.38■■■□□ 2.93
CCND3-221ENST00000514588 SLC16A10Q8TF71 515 aa33.38■■■□□ 2.93
CCND3-221ENST00000514588 TFCP2L1Q9NZI6 479 aa33.38■■■□□ 2.93
CCND3-221ENST00000514588 CCNL1Q9UK58 526 aaPredicted RBP33.37■■■□□ 2.93
CCND3-221ENST00000514588 MAP3K5Q99683 1374 aa33.34■■■□□ 2.93
CCND3-221ENST00000514588 PPM1GO15355 546 aaPredicted RBP33.34■■■□□ 2.93
CCND3-221ENST00000514588 TUBGCP6Q96RT7 1819 aa33.34■■■□□ 2.93
CCND3-221ENST00000514588 CYP27B1O15528 508 aa33.33■■■□□ 2.93
CCND3-221ENST00000514588 NCAPD2Q15021 1401 aa33.33■■■□□ 2.93
CCND3-221ENST00000514588 ANKRD26Q9UPS8 1709 aa33.33■■■□□ 2.93
CCND3-221ENST00000514588 WASHC2AQ641Q2 1341 aa33.31■■■□□ 2.92
CCND3-221ENST00000514588 POLR3GLQ9BT43 218 aa33.3■■■□□ 2.92
CCND3-221ENST00000514588 COL24A1Q17RW2 1714 aa33.28■■■□□ 2.92
CCND3-221ENST00000514588 POLKQ9UBT6 870 aa33.28■■■□□ 2.92
CCND3-221ENST00000514588 PKD1L3Q7Z443 1732 aa33.28■■■□□ 2.92
CCND3-221ENST00000514588 POLD1P28340 1107 aa33.27■■■□□ 2.92
CCND3-221ENST00000514588 MPRIPQ6WCQ1 1025 aa33.26■■■□□ 2.91
CCND3-221ENST00000514588 EYA1Q99502 592 aa33.25■■■□□ 2.91
CCND3-221ENST00000514588 PALLDQ8WX93 1383 aa33.24■■■□□ 2.91
CCND3-221ENST00000514588 MAP2P11137 1827 aaKnown RBP33.24■■■□□ 2.91
CCND3-221ENST00000514588 EIF4G2P78344 907 aaKnown RBP eCLIP33.24■■■□□ 2.91
CCND3-221ENST00000514588 TOGARAM1Q9Y4F4 1720 aa33.24■■■□□ 2.91
CCND3-221ENST00000514588 COL23A1Q86Y22 540 aaPredicted RBP33.23■■■□□ 2.91
CCND3-221ENST00000514588 HSPA5P11021 654 aaKnown RBP33.22■■■□□ 2.91
CCND3-221ENST00000514588 NKX1-1Q15270 411 aaPredicted RBP33.21■■■□□ 2.91
CCND3-221ENST00000514588 KLHL34Q8N239 644 aa33.21■■■□□ 2.91
CCND3-221ENST00000514588 SPG7Q9UQ90 795 aa33.21■■■□□ 2.91
CCND3-221ENST00000514588 C5P01031 1676 aa33.2■■■□□ 2.91
CCND3-221ENST00000514588 TNNT2P45379 298 aaPredicted RBP33.2■■■□□ 2.91
CCND3-221ENST00000514588 UTRNP46939 3433 aa33.2■■■□□ 2.91
CCND3-221ENST00000514588 MSH5O43196 834 aa33.19■■■□□ 2.9
CCND3-221ENST00000514588 ITGB4P16144 1822 aa33.18■■■□□ 2.9
CCND3-221ENST00000514588 PIGBQ92521 554 aa33.18■■■□□ 2.9
CCND3-221ENST00000514588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.18■■■□□ 2.9
CCND3-221ENST00000514588 SMARCC1Q92922 1105 aaPredicted RBP33.17■■■□□ 2.9
CCND3-221ENST00000514588 EIF4A2Q14240 407 aaKnown RBP33.16■■■□□ 2.9
CCND3-221ENST00000514588 PANK3Q9H999 370 aa33.16■■■□□ 2.9
CCND3-221ENST00000514588 HMGB2P26583 209 aaKnown RBP33.15■■■□□ 2.9
CCND3-221ENST00000514588 CCER1Q8TC90 406 aaPredicted RBP33.14■■■□□ 2.9
CCND3-221ENST00000514588 TAF1LQ8IZX4 1826 aa33.14■■■□□ 2.9
CCND3-221ENST00000514588 GPR162Q16538 588 aa33.13■■■□□ 2.89
CCND3-221ENST00000514588 MSL1Q68DK7 614 aa33.12■■■□□ 2.89
CCND3-221ENST00000514588 ZNF784Q8NCA9 323 aaPredicted RBP33.12■■■□□ 2.89
CCND3-221ENST00000514588 NLGN2Q8NFZ4 835 aa33.12■■■□□ 2.89
CCND3-221ENST00000514588 PHKG2P15735 406 aa33.11■■■□□ 2.89
CCND3-221ENST00000514588 IFNL2Q8IZJ0 200 aa33.1■■■□□ 2.89
CCND3-221ENST00000514588 FLAD1Q8NFF5 587 aa33.1■■■□□ 2.89
CCND3-221ENST00000514588 C4BP0C0L5 1744 aa33.09■■■□□ 2.89
CCND3-221ENST00000514588 CHD4Q14839 1912 aa33.08■■■□□ 2.89
CCND3-221ENST00000514588 TMOD3Q9NYL9 352 aa33.08■■■□□ 2.89
CCND3-221ENST00000514588 IGSF1Q8N6C5 1336 aa33.06■■■□□ 2.88
CCND3-221ENST00000514588 AMIGO3Q86WK7 504 aa33.06■■■□□ 2.88
CCND3-221ENST00000514588 AK7Q96M32 723 aa33.06■■■□□ 2.88
CCND3-221ENST00000514588 PLEKHG2Q9H7P9 1386 aa33.06■■■□□ 2.88
CCND3-221ENST00000514588 LOC102724428A0A0B4J2F2 783 aa33.05■■■□□ 2.88
CCND3-221ENST00000514588 SIK1P57059 783 aa33.05■■■□□ 2.88
CCND3-221ENST00000514588 PELP1Q8IZL8 1130 aaKnown RBP33.05■■■□□ 2.88
CCND3-221ENST00000514588 ASAP1Q9ULH1 1129 aa33.04■■■□□ 2.88
CCND3-221ENST00000514588 SMIM5Q71RC9 77 aa33.01■■■□□ 2.87
CCND3-221ENST00000514588 LINC00116Q8NCU8 138 aa33.01■■■□□ 2.87
CCND3-221ENST00000514588 MORC1Q86VD1 984 aa33■■■□□ 2.87
CCND3-221ENST00000514588 UBR3Q6ZT12 1888 aa32.99■■■□□ 2.87
CCND3-221ENST00000514588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.99■■■□□ 2.87
CCND3-221ENST00000514588 PHF14O94880 888 aa32.99■■■□□ 2.87
CCND3-221ENST00000514588 ITPK1Q13572 414 aa32.98■■■□□ 2.87
CCND3-221ENST00000514588 ATG3Q9NT62 314 aa32.98■■■□□ 2.87
CCND3-221ENST00000514588 YBX3P16989 372 aaKnown RBP eCLIP32.96■■■□□ 2.871e-6■□□□□ 11
CCND3-221ENST00000514588 CD2APQ9Y5K6 639 aa32.96■■■□□ 2.87
CCND3-221ENST00000514588 SSFA2P28290 1259 aa32.95■■■□□ 2.87
CCND3-221ENST00000514588 ATP6V1AP38606 617 aa32.95■■■□□ 2.87
CCND3-221ENST00000514588 PLEKHO1Q53GL0 409 aaPredicted RBP32.94■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms