RNA–Protein interactions for RNA: ENST00000514212.5

ABLIM3-208, Transcript of actin binding LIM protein family member 3, human

TSL 4

Gene ABLIM3, Length 557 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABLIM3-208	ENST00000514212	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.22	□□□□□ -0.61
ABLIM3-208	ENST00000514212	TNS2	Q63HR2	1409 aa		11.22	□□□□□ -0.61
ABLIM3-208	ENST00000514212	PCDH11X	Q9BZA7	1347 aa		11.22	□□□□□ -0.61
ABLIM3-208	ENST00000514212	PCDH11Y	Q9BZA8	1340 aa		11.22	□□□□□ -0.61
ABLIM3-208	ENST00000514212	PKD1L3	Q7Z443	1732 aa		11.21	□□□□□ -0.61
ABLIM3-208	ENST00000514212	THSD7A	Q9UPZ6	1657 aa		11.21	□□□□□ -0.61
ABLIM3-208	ENST00000514212	USHBP1	Q8N6Y0	703 aa		11.21	□□□□□ -0.61
ABLIM3-208	ENST00000514212	GAS2L2	Q8NHY3	880 aa		11.21	□□□□□ -0.61
ABLIM3-208	ENST00000514212	ZCRB1	Q8TBF4	217 aa	Known RBP	11.21	□□□□□ -0.61
ABLIM3-208	ENST00000514212	HSP90AB1	P08238	724 aa	Known RBP	11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	HMOX1	P09601	288 aa		11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	PDE3B	Q13370	1112 aa		11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	MIER1	Q8N108	512 aa		11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	NGEF	Q8N5V2	710 aa		11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	PNISR	Q8TF01	805 aa	Known RBP	11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	RSPH6A	Q9H0K4	717 aa		11.2	□□□□□ -0.62
ABLIM3-208	ENST00000514212	MEGF6	O75095	1541 aa		11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	PRKAR2B	P31323	418 aa		11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	C1orf141	Q5JVX7	400 aa		11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	RUNDC1	Q96C34	613 aa		11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	RGS17	Q9UGC6	210 aa	Predicted RBP	11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	LRRC37A3	O60309	1634 aa		11.19	□□□□□ -0.62
ABLIM3-208	ENST00000514212	LMOD3	Q0VAK6	560 aa		11.18	□□□□□ -0.62
ABLIM3-208	ENST00000514212	SEPT12	Q8IYM1	358 aa		11.18	□□□□□ -0.62
ABLIM3-208	ENST00000514212	IFNL2	Q8IZJ0	200 aa		11.18	□□□□□ -0.62
ABLIM3-208	ENST00000514212	ADAMTS8	Q9UP79	889 aa		11.18	□□□□□ -0.62
ABLIM3-208	ENST00000514212	NCBP3	Q53F19	620 aa	Known RBP	11.17	□□□□□ -0.62
ABLIM3-208	ENST00000514212	POTEA	Q6S8J7	498 aa		11.17	□□□□□ -0.62
ABLIM3-208	ENST00000514212	AEBP1	Q8IUX7	1158 aa		11.17	□□□□□ -0.62
ABLIM3-208	ENST00000514212	FAM9B	Q8IZU0	186 aa		11.17	□□□□□ -0.62
ABLIM3-208	ENST00000514212	HTATSF1	O43719	755 aa	Known RBP	11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	AKAP4	Q5JQC9	854 aa		11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	RTF1	Q92541	710 aa	Known RBP	11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	BCL9	O00512	1426 aa		11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	RGS12	O14924	1447 aa		11.16	□□□□□ -0.62
ABLIM3-208	ENST00000514212	CCDC184	Q52MB2	194 aa		11.15	□□□□□ -0.62
ABLIM3-208	ENST00000514212	KRT27	Q7Z3Y8	459 aa		11.15	□□□□□ -0.62
ABLIM3-208	ENST00000514212	PLEKHF1	Q96S99	279 aa		11.15	□□□□□ -0.62
ABLIM3-208	ENST00000514212	GNAT3	A8MTJ3	354 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	CALD1	Q05682	793 aa	Known RBP	11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	NFE2L2	Q16236	605 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	FAM196A	Q6ZSG2	479 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	DCAF5	Q96JK2	942 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	SHANK3	Q9BYB0	1731 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	MAP3K5	Q99683	1374 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	BRWD3	Q6RI45	1802 aa		11.14	□□□□□ -0.63
ABLIM3-208	ENST00000514212	KAT6B	Q8WYB5	2073 aa		11.13	□□□□□ -0.63
ABLIM3-208	ENST00000514212	PHKG2	P15735	406 aa		11.13	□□□□□ -0.63
ABLIM3-208	ENST00000514212	HMGB2	P26583	209 aa	Known RBP	11.13	□□□□□ -0.63
ABLIM3-208	ENST00000514212	MTHFSD	Q2M296	383 aa	Known RBP	11.13	□□□□□ -0.63
ABLIM3-208	ENST00000514212	DDX54	Q8TDD1	881 aa	Known RBP	11.13	□□□□□ -0.63
ABLIM3-208	ENST00000514212	NKX1-1	Q15270	411 aa	Predicted RBP	11.12	□□□□□ -0.63
ABLIM3-208	ENST00000514212	EP400	Q96L91	3159 aa		11.12	□□□□□ -0.63
ABLIM3-208	ENST00000514212	DLG5	Q8TDM6	1919 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	ERVV-2	B6SEH9	535 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	CYP27B1	O15528	508 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	TMPO	P42166	694 aa	Known RBP	11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	RIPK4	P57078	832 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	CCDC27	Q2M243	656 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	CCDC146	Q8IYE0	955 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	PHACTR3	Q96KR7	559 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	SCN11A	Q9UI33	1791 aa		11.11	□□□□□ -0.63
ABLIM3-208	ENST00000514212	VIRMA	Q69YN4	1812 aa	Known RBP	11.1	□□□□□ -0.63
ABLIM3-208	ENST00000514212	APAF1	O14727	1248 aa		11.1	□□□□□ -0.63
ABLIM3-208	ENST00000514212	TEF	Q10587	303 aa		11.1	□□□□□ -0.63
ABLIM3-208	ENST00000514212	MARCH10	Q8NA82	808 aa	Predicted RBP	11.1	□□□□□ -0.63
ABLIM3-208	ENST00000514212	ADAMTS7	Q9UKP4	1686 aa		11.09	□□□□□ -0.63
ABLIM3-208	ENST00000514212	NHS	Q6T4R5	1651 aa		11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	RNMT	O43148	476 aa	Known RBP	11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SF3B2	Q13435	895 aa	Known RBP	11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	CCDC125	Q86Z20	511 aa		11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	BABAM1	Q9NWV8	329 aa		11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	TMOD3	Q9NYL9	352 aa		11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	DOT1L	Q8TEK3	1739 aa		11.08	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SBF2	Q86WG5	1849 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	MRC1	P22897	1456 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	CEMIP	Q8WUJ3	1361 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	CABP4	P57796	275 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	NEUROD2	Q15784	382 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	MPRIP	Q6WCQ1	1025 aa		11.07	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SMARCC1	Q92922	1105 aa	Predicted RBP	11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SYTL4	Q96C24	671 aa	Predicted RBP	11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SLC52A2	Q9HAB3	445 aa		11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	ITGB4	P16144	1822 aa		11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	IL16	Q14005	1332 aa		11.06	□□□□□ -0.64
ABLIM3-208	ENST00000514212	KDM6A	O15550	1401 aa	Predicted RBP	11.05	□□□□□ -0.64
ABLIM3-208	ENST00000514212	WDR63	Q8IWG1	891 aa		11.05	□□□□□ -0.64
ABLIM3-208	ENST00000514212	CHMP4A	Q9BY43	222 aa		11.05	□□□□□ -0.64
ABLIM3-208	ENST00000514212	TOGARAM1	Q9Y4F4	1720 aa		11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	GNAI1	P63096	354 aa		11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	TAF7	Q15545	349 aa	Predicted RBP	11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	TTC5	Q8N0Z6	440 aa		11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	RRP7A	Q9Y3A4	280 aa	Known RBP	11.04	□□□□□ -0.64
ABLIM3-208	ENST00000514212	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.03	□□□□□ -0.64
ABLIM3-208	ENST00000514212	SIPA1L3	O60292	1781 aa	Predicted RBP	11.03	□□□□□ -0.64
ABLIM3-208	ENST00000514212	RGPD4	Q7Z3J3	1758 aa		11.03	□□□□□ -0.64
ABLIM3-208	ENST00000514212	PRIM1	P49642	420 aa	Known RBP	11.03	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms