RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 NEFMP07197 916 aa19.4■□□□□ 0.7
SNF8-212ENST00000514089 SYTL4Q96C24 671 aaPredicted RBP19.4■□□□□ 0.7
SNF8-212ENST00000514089 ACSBG1Q96GR2 724 aa19.4■□□□□ 0.7
SNF8-212ENST00000514089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
SNF8-212ENST00000514089 PCDH11XQ9BZA7 1347 aa19.4■□□□□ 0.7
SNF8-212ENST00000514089 PCDH11YQ9BZA8 1340 aa19.4■□□□□ 0.7
SNF8-212ENST00000514089 APBA3O96018 575 aa19.39■□□□□ 0.69
SNF8-212ENST00000514089 OVOS2A0A0G2JMS6 1433 aa19.39■□□□□ 0.69
SNF8-212ENST00000514089 RGPD5Q99666 1765 aa19.39■□□□□ 0.69
SNF8-212ENST00000514089 BAG6P46379 1132 aa19.38■□□□□ 0.69
SNF8-212ENST00000514089 C1orf141Q5JVX7 400 aa19.38■□□□□ 0.69
SNF8-212ENST00000514089 TNS2Q63HR2 1409 aa19.38■□□□□ 0.69
SNF8-212ENST00000514089 IFNL2Q8IZJ0 200 aa19.38■□□□□ 0.69
SNF8-212ENST00000514089 MEGF6O75095 1541 aa19.37■□□□□ 0.69
SNF8-212ENST00000514089 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
SNF8-212ENST00000514089 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
SNF8-212ENST00000514089 ZNF530Q6P9A1 599 aaPredicted RBP19.36■□□□□ 0.69
SNF8-212ENST00000514089 BCL11BQ9C0K0 894 aaPredicted RBP19.36■□□□□ 0.69
SNF8-212ENST00000514089 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
SNF8-212ENST00000514089 WDR43Q15061 677 aaKnown RBP eCLIP19.35■□□□□ 0.69
SNF8-212ENST00000514089 CYP27B1O15528 508 aa19.34■□□□□ 0.69
SNF8-212ENST00000514089 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
SNF8-212ENST00000514089 PRIM1P49642 420 aaKnown RBP19.34■□□□□ 0.69
SNF8-212ENST00000514089 FCHSD2O94868 740 aa19.33■□□□□ 0.68
SNF8-212ENST00000514089 PRKAR2BP31323 418 aa19.33■□□□□ 0.68
SNF8-212ENST00000514089 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.68
SNF8-212ENST00000514089 KCNQ2O43526 872 aa19.32■□□□□ 0.68
SNF8-212ENST00000514089 PHKG2P15735 406 aa19.32■□□□□ 0.68
SNF8-212ENST00000514089 DEFB132Q7Z7B7 95 aa19.32■□□□□ 0.68
SNF8-212ENST00000514089 EN1Q05925 392 aaPredicted RBP19.31■□□□□ 0.68
SNF8-212ENST00000514089 KDRP35968 1356 aa19.31■□□□□ 0.68
SNF8-212ENST00000514089 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
SNF8-212ENST00000514089 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
SNF8-212ENST00000514089 NCAPD2Q15021 1401 aa19.3■□□□□ 0.68
SNF8-212ENST00000514089 MTHFSDQ2M296 383 aaKnown RBP19.29■□□□□ 0.68
SNF8-212ENST00000514089 RSPH6AQ9H0K4 717 aa19.29■□□□□ 0.68
SNF8-212ENST00000514089 MAPK8IP3Q9UPT6 1336 aa19.28■□□□□ 0.68
SNF8-212ENST00000514089 NKX1-1Q15270 411 aaPredicted RBP19.28■□□□□ 0.68
SNF8-212ENST00000514089 AKAP4Q5JQC9 854 aa19.28■□□□□ 0.68
SNF8-212ENST00000514089 DCAF5Q96JK2 942 aa19.28■□□□□ 0.68
SNF8-212ENST00000514089 PARP4Q9UKK3 1724 aaKnown RBP19.28■□□□□ 0.68
SNF8-212ENST00000514089 BCL9O00512 1426 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 LRRC37A3O60309 1634 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 CABP4P57796 275 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 PTF1AQ7RTS3 328 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 MRS2Q9HD23 443 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 TMOD3Q9NYL9 352 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 PLEKHG2Q9H7P9 1386 aa19.27■□□□□ 0.68
SNF8-212ENST00000514089 COL3A1P02461 1466 aaPredicted RBP19.27■□□□□ 0.67
SNF8-212ENST00000514089 EZH2Q15910 746 aaKnown RBP19.25■□□□□ 0.67
SNF8-212ENST00000514089 RTF1Q92541 710 aaKnown RBP19.25■□□□□ 0.67
SNF8-212ENST00000514089 PHACTR3Q96KR7 559 aa19.25■□□□□ 0.67
SNF8-212ENST00000514089 BRWD3Q6RI45 1802 aa19.25■□□□□ 0.67
SNF8-212ENST00000514089 GNAT3A8MTJ3 354 aa19.24■□□□□ 0.67
SNF8-212ENST00000514089 ERVV-2B6SEH9 535 aa19.24■□□□□ 0.67
SNF8-212ENST00000514089 PLSCR1O15162 318 aa19.24■□□□□ 0.67
SNF8-212ENST00000514089 DIEXFQ68CQ4 756 aaKnown RBP19.23■□□□□ 0.67
SNF8-212ENST00000514089 RGPD2P0DJD1 1756 aa19.22■□□□□ 0.67
SNF8-212ENST00000514089 CAMKK2Q96RR4 588 aa19.22■□□□□ 0.67
SNF8-212ENST00000514089 ADAMTS8Q9UP79 889 aa19.22■□□□□ 0.67
SNF8-212ENST00000514089 NBPF14Q5TI25 921 aa19.21■□□□□ 0.67
SNF8-212ENST00000514089 PIGBQ92521 554 aa19.21■□□□□ 0.67
SNF8-212ENST00000514089 SMARCC1Q92922 1105 aaPredicted RBP19.21■□□□□ 0.67
SNF8-212ENST00000514089 CCDC146Q8IYE0 955 aa19.2■□□□□ 0.66
SNF8-212ENST00000514089 NFATC2IPQ8NCF5 419 aa19.2■□□□□ 0.66
SNF8-212ENST00000514089 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
SNF8-212ENST00000514089 TEFQ10587 303 aa19.19■□□□□ 0.66
SNF8-212ENST00000514089 TXNRD1Q16881 649 aa19.19■□□□□ 0.66
SNF8-212ENST00000514089 LGR6Q9HBX8 967 aa19.19■□□□□ 0.66
SNF8-212ENST00000514089 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
SNF8-212ENST00000514089 RUNDC1Q96C34 613 aa19.18■□□□□ 0.66
SNF8-212ENST00000514089 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
SNF8-212ENST00000514089 MAP3K5Q99683 1374 aa19.17■□□□□ 0.66
SNF8-212ENST00000514089 HMGB2P26583 209 aaKnown RBP19.16■□□□□ 0.66
SNF8-212ENST00000514089 NEUROD2Q15784 382 aa19.16■□□□□ 0.66
SNF8-212ENST00000514089 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
SNF8-212ENST00000514089 HTATSF1O43719 755 aaKnown RBP19.15■□□□□ 0.66
SNF8-212ENST00000514089 RIPK4P57078 832 aa19.15■□□□□ 0.66
SNF8-212ENST00000514089 SLC52A2Q9HAB3 445 aa19.15■□□□□ 0.66
SNF8-212ENST00000514089 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
SNF8-212ENST00000514089 WNK3Q9BYP7 1800 aa19.15■□□□□ 0.66
SNF8-212ENST00000514089 EP400Q96L91 3159 aa19.14■□□□□ 0.66
SNF8-212ENST00000514089 SLC27A3Q5K4L6 730 aa19.14■□□□□ 0.65
SNF8-212ENST00000514089 FAM9BQ8IZU0 186 aa19.14■□□□□ 0.65
SNF8-212ENST00000514089 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
SNF8-212ENST00000514089 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
SNF8-212ENST00000514089 ASAP1Q9ULH1 1129 aa19.14■□□□□ 0.65
SNF8-212ENST00000514089 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
SNF8-212ENST00000514089 MCM10Q7L590 875 aa19.13■□□□□ 0.65
SNF8-212ENST00000514089 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
SNF8-212ENST00000514089 ATG3Q9NT62 314 aa19.13■□□□□ 0.65
SNF8-212ENST00000514089 RGPD1P0DJD0 1748 aa19.13■□□□□ 0.65
SNF8-212ENST00000514089 DCTN1Q14203 1278 aa19.12■□□□□ 0.65
SNF8-212ENST00000514089 TTC5Q8N0Z6 440 aa19.12■□□□□ 0.65
SNF8-212ENST00000514089 PROM2Q8N271 834 aa19.12■□□□□ 0.65
SNF8-212ENST00000514089 STK32BQ9NY57 414 aa19.12■□□□□ 0.65
SNF8-212ENST00000514089 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
SNF8-212ENST00000514089 PALLDQ8WX93 1383 aa19.11■□□□□ 0.65
SNF8-212ENST00000514089 PTCD1O75127 700 aaKnown RBP19.11■□□□□ 0.65
SNF8-212ENST00000514089 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms