RNA–Protein interactions for RNA: ENST00000513629.1

CDK7-210, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 885 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-210ENST00000513629 PLEKHG3A1L390 1219 aa13.37□□□□□ -0.27
CDK7-210ENST00000513629 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
CDK7-210ENST00000513629 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
CDK7-210ENST00000513629 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
CDK7-210ENST00000513629 NBPF8Q3BBV2 869 aa13.37□□□□□ -0.27
CDK7-210ENST00000513629 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
CDK7-210ENST00000513629 DSG2Q14126 1118 aa13.36□□□□□ -0.27
CDK7-210ENST00000513629 NBR1Q14596 966 aa13.36□□□□□ -0.27
CDK7-210ENST00000513629 STRN4Q9NRL3 753 aa13.36□□□□□ -0.27
CDK7-210ENST00000513629 FAM182BQ5T319 152 aa13.35□□□□□ -0.27
CDK7-210ENST00000513629 ABTB2Q8N961 1025 aa13.35□□□□□ -0.27
CDK7-210ENST00000513629 SPATA31A1Q5TZJ5 1347 aa13.35□□□□□ -0.27
CDK7-210ENST00000513629 FOXK1P85037 733 aa13.34□□□□□ -0.27
CDK7-210ENST00000513629 C3orf67Q6ZVT6 689 aa13.34□□□□□ -0.27
CDK7-210ENST00000513629 L3MBTL2Q969R5 705 aa13.34□□□□□ -0.27
CDK7-210ENST00000513629 USP19O94966 1318 aa13.34□□□□□ -0.27
CDK7-210ENST00000513629 SSH2Q76I76 1423 aa13.33□□□□□ -0.28
CDK7-210ENST00000513629 BAG6P46379 1132 aa13.33□□□□□ -0.28
CDK7-210ENST00000513629 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
CDK7-210ENST00000513629 TRPM1Q7Z4N2 1603 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 LMO7Q8WWI1 1683 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 CAMK2BQ13554 666 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 USP35Q9P2H5 1018 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 RGPD1P0DJD0 1748 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 CPDO75976 1380 aa13.32□□□□□ -0.28
CDK7-210ENST00000513629 CAMTA1Q9Y6Y1 1673 aa13.31□□□□□ -0.28
CDK7-210ENST00000513629 ROCK2O75116 1388 aaKnown RBP13.31□□□□□ -0.28
CDK7-210ENST00000513629 USP6P35125 1406 aa13.3□□□□□ -0.28
CDK7-210ENST00000513629 TNS1Q9HBL0 1735 aaKnown RBP13.3□□□□□ -0.28
CDK7-210ENST00000513629 EVA1CP58658 441 aa13.3□□□□□ -0.28
CDK7-210ENST00000513629 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
CDK7-210ENST00000513629 NEUROD1Q13562 356 aa13.3□□□□□ -0.28
CDK7-210ENST00000513629 LARP1Q6PKG0 1096 aaKnown RBP13.3□□□□□ -0.28
CDK7-210ENST00000513629 NLRP13Q86W25 1043 aa13.3□□□□□ -0.28
CDK7-210ENST00000513629 ARHGEF1Q92888 912 aaKnown RBP13.3□□□□□ -0.28
CDK7-210ENST00000513629 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
CDK7-210ENST00000513629 PSDA5PKW4 1024 aaPredicted RBP13.29□□□□□ -0.28
CDK7-210ENST00000513629 GCP02774 474 aa13.29□□□□□ -0.28
CDK7-210ENST00000513629 BRD4O60885 1362 aaPredicted RBP13.29□□□□□ -0.28
CDK7-210ENST00000513629 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
CDK7-210ENST00000513629 COL5A2P05997 1499 aaPredicted RBP13.29□□□□□ -0.28
CDK7-210ENST00000513629 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
CDK7-210ENST00000513629 BARGINQ6ZT62 677 aa13.28□□□□□ -0.28
CDK7-210ENST00000513629 PLPP6Q8IY26 295 aa13.28□□□□□ -0.28
CDK7-210ENST00000513629 EVC2Q86UK5 1308 aa13.28□□□□□ -0.28
CDK7-210ENST00000513629 SLIT3O75094 1523 aa13.28□□□□□ -0.28
CDK7-210ENST00000513629 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.29
CDK7-210ENST00000513629 POTEJP0CG39 1038 aa13.27□□□□□ -0.29
CDK7-210ENST00000513629 TCP11L2Q8N4U5 519 aa13.27□□□□□ -0.29
CDK7-210ENST00000513629 PIK3C2AO00443 1686 aa13.27□□□□□ -0.29
CDK7-210ENST00000513629 LRP5O75197 1615 aa13.26□□□□□ -0.29
CDK7-210ENST00000513629 TRIM37O94972 964 aa13.26□□□□□ -0.29
CDK7-210ENST00000513629 FAM196AQ6ZSG2 479 aa13.26□□□□□ -0.29
CDK7-210ENST00000513629 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.26□□□□□ -0.29
CDK7-210ENST00000513629 PDE3BQ13370 1112 aa13.25□□□□□ -0.29
CDK7-210ENST00000513629 ARIH1Q9Y4X5 557 aaPredicted RBP13.25□□□□□ -0.29
CDK7-210ENST00000513629 EZH2Q15910 746 aaKnown RBP13.24□□□□□ -0.29
CDK7-210ENST00000513629 CRB1P82279 1406 aa13.23□□□□□ -0.29
CDK7-210ENST00000513629 AATKQ6ZMQ8 1374 aa13.23□□□□□ -0.29
CDK7-210ENST00000513629 PARP4Q9UKK3 1724 aaKnown RBP13.23□□□□□ -0.29
CDK7-210ENST00000513629 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
CDK7-210ENST00000513629 THRAP3Q9Y2W1 955 aaKnown RBP13.23□□□□□ -0.29
CDK7-210ENST00000513629 CPSF1Q10570 1443 aaKnown RBP13.22□□□□□ -0.29
CDK7-210ENST00000513629 AKAP12Q02952 1782 aa13.22□□□□□ -0.29
CDK7-210ENST00000513629 APBA3O96018 575 aa13.22□□□□□ -0.29
CDK7-210ENST00000513629 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
CDK7-210ENST00000513629 LRRC37A3O60309 1634 aa13.21□□□□□ -0.29
CDK7-210ENST00000513629 TTC21BQ7Z4L5 1316 aa13.21□□□□□ -0.29
CDK7-210ENST00000513629 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
CDK7-210ENST00000513629 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
CDK7-210ENST00000513629 COL18A1P39060 1754 aa13.2□□□□□ -0.3
CDK7-210ENST00000513629 TOM1L2Q6ZVM7 507 aa13.2□□□□□ -0.3
CDK7-210ENST00000513629 KTN1Q86UP2 1357 aaKnown RBP13.2□□□□□ -0.3
CDK7-210ENST00000513629 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
CDK7-210ENST00000513629 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 RREB1Q92766 1687 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 CARD11Q9BXL7 1154 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 AXIN2Q9Y2T1 843 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 OVOS2A0A0G2JMS6 1433 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 OVOS2A0A0J9YW53 1432 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 OVOS2Q6IE36 1432 aa13.19□□□□□ -0.3
CDK7-210ENST00000513629 NFAT5O94916 1531 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 WDR17Q8IZU2 1322 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 ARHGEF25Q86VW2 580 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 KCNH5Q8NCM2 988 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 NUP188Q5SRE5 1749 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 MON2Q7Z3U7 1717 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 TONSLQ96HA7 1378 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 WNK3Q9BYP7 1800 aa13.18□□□□□ -0.3
CDK7-210ENST00000513629 PEAK1Q9H792 1746 aa13.17□□□□□ -0.3
CDK7-210ENST00000513629 DPYSL4O14531 572 aa13.16□□□□□ -0.3
CDK7-210ENST00000513629 CSB-PGBD3P0DP91 1061 aa13.16□□□□□ -0.3
CDK7-210ENST00000513629 DDB1Q16531 1140 aa13.16□□□□□ -0.3
CDK7-210ENST00000513629 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
CDK7-210ENST00000513629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.15□□□□□ -0.3
CDK7-210ENST00000513629 ABCC6O95255 1503 aa13.14□□□□□ -0.31
CDK7-210ENST00000513629 C11orf95C9JLR9 678 aaPredicted RBP13.14□□□□□ -0.31
CDK7-210ENST00000513629 SEMA3EO15041 775 aa13.14□□□□□ -0.31
CDK7-210ENST00000513629 TMC1Q8TDI8 760 aa13.14□□□□□ -0.31
CDK7-210ENST00000513629 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms