RNA–Protein interactions for RNA: ENST00000513511.5

ABCC3-212, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 5

Gene ABCC3, Length 1,042 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-212ENST00000513511 MEGF6O75095 1541 aa19.14■□□□□ 0.65
ABCC3-212ENST00000513511 SLC15A2Q16348 729 aa19.13■□□□□ 0.65
ABCC3-212ENST00000513511 DOT1LQ8TEK3 1739 aa19.12■□□□□ 0.65
ABCC3-212ENST00000513511 CGNL1Q0VF96 1302 aa19.12■□□□□ 0.65
ABCC3-212ENST00000513511 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
ABCC3-212ENST00000513511 HSP90AB2PQ58FF8 381 aa19.12■□□□□ 0.65
ABCC3-212ENST00000513511 NBPF6Q5VWK0 638 aa19.12■□□□□ 0.65
ABCC3-212ENST00000513511 NBPF4Q96M43 638 aa19.12■□□□□ 0.65
ABCC3-212ENST00000513511 ANKRD26Q9UPS8 1709 aa19.11■□□□□ 0.65
ABCC3-212ENST00000513511 PPM1GO15355 546 aaPredicted RBP19.11■□□□□ 0.65
ABCC3-212ENST00000513511 ZCRB1Q8TBF4 217 aaKnown RBP19.11■□□□□ 0.65
ABCC3-212ENST00000513511 ATF5Q9Y2D1 282 aaPredicted RBP19.11■□□□□ 0.65
ABCC3-212ENST00000513511 SHANK3Q9BYB0 1731 aa19.11■□□□□ 0.65
ABCC3-212ENST00000513511 FLT4P35916 1363 aa19.1■□□□□ 0.65
ABCC3-212ENST00000513511 RAPGEF4Q8WZA2 1011 aa19.1■□□□□ 0.65
ABCC3-212ENST00000513511 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
ABCC3-212ENST00000513511 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
ABCC3-212ENST00000513511 INSRP06213 1382 aa19.07■□□□□ 0.64
ABCC3-212ENST00000513511 PAPPAQ13219 1627 aa19.07■□□□□ 0.64
ABCC3-212ENST00000513511 LRRC4BQ9NT99 713 aa19.07■□□□□ 0.64
ABCC3-212ENST00000513511 TATP17735 454 aaPredicted RBP19.06■□□□□ 0.64
ABCC3-212ENST00000513511 KCNQ4P56696 695 aa19.06■□□□□ 0.64
ABCC3-212ENST00000513511 ZNF827Q17R98 1081 aa19.06■□□□□ 0.64
ABCC3-212ENST00000513511 NSD2O96028 1365 aa19.06■□□□□ 0.64
ABCC3-212ENST00000513511 TNNT2P45379 298 aaPredicted RBP19.04■□□□□ 0.64
ABCC3-212ENST00000513511 KNSTRNQ9Y448 316 aa19.04■□□□□ 0.64
ABCC3-212ENST00000513511 KIF24Q5T7B8 1368 aa19.04■□□□□ 0.64
ABCC3-212ENST00000513511 DCAF8L1A6NGE4 600 aa19.03■□□□□ 0.64
ABCC3-212ENST00000513511 PTGER2P43116 358 aa19.03■□□□□ 0.64
ABCC3-212ENST00000513511 MTFR1LQ9H019 292 aa19.03■□□□□ 0.64
ABCC3-212ENST00000513511 PCDH11XQ9BZA7 1347 aa19.01■□□□□ 0.63
ABCC3-212ENST00000513511 PCDH11YQ9BZA8 1340 aa19.01■□□□□ 0.63
ABCC3-212ENST00000513511 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
ABCC3-212ENST00000513511 SLC27A3Q5K4L6 730 aa19.01■□□□□ 0.63
ABCC3-212ENST00000513511 MAP2P11137 1827 aaKnown RBP19■□□□□ 0.63
ABCC3-212ENST00000513511 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
ABCC3-212ENST00000513511 TFCP2L1Q9NZI6 479 aa18.99■□□□□ 0.63
ABCC3-212ENST00000513511 CCNL1Q9UK58 526 aaPredicted RBP18.99■□□□□ 0.63
ABCC3-212ENST00000513511 LY75O60449 1722 aa18.99■□□□□ 0.63
ABCC3-212ENST00000513511 AKT1S1Q96B36 256 aa18.98■□□□□ 0.63
ABCC3-212ENST00000513511 FHDC1Q9C0D6 1143 aaPredicted RBP18.98■□□□□ 0.63
ABCC3-212ENST00000513511 MPRIPQ6WCQ1 1025 aa18.97■□□□□ 0.63
ABCC3-212ENST00000513511 CYP27B1O15528 508 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 YY1P25490 414 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 MORC1Q86VD1 984 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 KLHL34Q8N239 644 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 PNPLA7Q6ZV29 1317 aa18.96■□□□□ 0.63
ABCC3-212ENST00000513511 TUBGCP6Q96RT7 1819 aa18.95■□□□□ 0.62
ABCC3-212ENST00000513511 PKD1L3Q7Z443 1732 aa18.95■□□□□ 0.62
ABCC3-212ENST00000513511 CC2D1BQ5T0F9 858 aaKnown RBP18.95■□□□□ 0.62
ABCC3-212ENST00000513511 ARXQ96QS3 562 aa18.95■□□□□ 0.62
ABCC3-212ENST00000513511 TOGARAM1Q9Y4F4 1720 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 MSH5O43196 834 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 EYA1Q99502 592 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 SYT17Q9BSW7 474 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 QSER1Q2KHR3 1735 aa18.94■□□□□ 0.62
ABCC3-212ENST00000513511 NPC1L1Q9UHC9 1359 aa18.93■□□□□ 0.62
ABCC3-212ENST00000513511 CNGB1Q14028 1251 aaPredicted RBP18.93■□□□□ 0.62
ABCC3-212ENST00000513511 SPG7Q9UQ90 795 aa18.93■□□□□ 0.62
ABCC3-212ENST00000513511 PALLDQ8WX93 1383 aa18.93■□□□□ 0.62
ABCC3-212ENST00000513511 POLD1P28340 1107 aa18.91■□□□□ 0.62
ABCC3-212ENST00000513511 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
ABCC3-212ENST00000513511 C5P01031 1676 aa18.91■□□□□ 0.62
ABCC3-212ENST00000513511 NCAPD2Q15021 1401 aa18.91■□□□□ 0.62
ABCC3-212ENST00000513511 ITGB4P16144 1822 aa18.9■□□□□ 0.62
ABCC3-212ENST00000513511 SLC16A10Q8TF71 515 aa18.9■□□□□ 0.62
ABCC3-212ENST00000513511 UTRNP46939 3433 aa18.9■□□□□ 0.62
ABCC3-212ENST00000513511 MSL1Q68DK7 614 aa18.86■□□□□ 0.61
ABCC3-212ENST00000513511 COL23A1Q86Y22 540 aaPredicted RBP18.86■□□□□ 0.61
ABCC3-212ENST00000513511 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
ABCC3-212ENST00000513511 PIGBQ92521 554 aa18.86■□□□□ 0.61
ABCC3-212ENST00000513511 SMARCC1Q92922 1105 aaPredicted RBP18.86■□□□□ 0.61
ABCC3-212ENST00000513511 TMOD3Q9NYL9 352 aa18.86■□□□□ 0.61
ABCC3-212ENST00000513511 PHKG2P15735 406 aa18.85■□□□□ 0.61
ABCC3-212ENST00000513511 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
ABCC3-212ENST00000513511 PELP1Q8IZL8 1130 aaKnown RBP18.85■□□□□ 0.61
ABCC3-212ENST00000513511 TAF1LQ8IZX4 1826 aa18.85■□□□□ 0.61
ABCC3-212ENST00000513511 NKX1-1Q15270 411 aaPredicted RBP18.84■□□□□ 0.61
ABCC3-212ENST00000513511 AK7Q96M32 723 aa18.84■□□□□ 0.61
ABCC3-212ENST00000513511 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.84■□□□□ 0.61
ABCC3-212ENST00000513511 C4BP0C0L5 1744 aa18.83■□□□□ 0.61
ABCC3-212ENST00000513511 IGSF1Q8N6C5 1336 aa18.83■□□□□ 0.61
ABCC3-212ENST00000513511 PHF14O94880 888 aa18.83■□□□□ 0.6
ABCC3-212ENST00000513511 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
ABCC3-212ENST00000513511 GPR162Q16538 588 aa18.82■□□□□ 0.6
ABCC3-212ENST00000513511 COL24A1Q17RW2 1714 aa18.81■□□□□ 0.6
ABCC3-212ENST00000513511 MTHFSP49914 203 aa18.81■□□□□ 0.6
ABCC3-212ENST00000513511 ASAP1Q9ULH1 1129 aa18.81■□□□□ 0.6
ABCC3-212ENST00000513511 SMIM5Q71RC9 77 aa18.8■□□□□ 0.6
ABCC3-212ENST00000513511 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
ABCC3-212ENST00000513511 NLGN2Q8NFZ4 835 aa18.8■□□□□ 0.6
ABCC3-212ENST00000513511 GOLGB1Q14789 3259 aaKnown RBP18.8■□□□□ 0.6
ABCC3-212ENST00000513511 COL3A1P02461 1466 aaPredicted RBP18.79■□□□□ 0.6
ABCC3-212ENST00000513511 LOC102724428A0A0B4J2F2 783 aa18.79■□□□□ 0.6
ABCC3-212ENST00000513511 HMGB2P26583 209 aaKnown RBP18.79■□□□□ 0.6
ABCC3-212ENST00000513511 SIK1P57059 783 aa18.79■□□□□ 0.6
ABCC3-212ENST00000513511 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
ABCC3-212ENST00000513511 ZNF530Q6P9A1 599 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms