RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 ANKRD36BQ8N2N9 1353 aa15.1■□□□□ 0.01
CLDND1-227ENST00000513452 COL23A1Q86Y22 540 aaPredicted RBP15.09■□□□□ 0.01
CLDND1-227ENST00000513452 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
CLDND1-227ENST00000513452 SBNO2Q9Y2G9 1366 aa15.07■□□□□ 0
CLDND1-227ENST00000513452 FAM208AQ9UK61 1670 aaKnown RBP15.06■□□□□ 0
CLDND1-227ENST00000513452 LTV1Q96GA3 475 aaPredicted RBP15.06■□□□□ 0
CLDND1-227ENST00000513452 CD2APQ9Y5K6 639 aa15.05■□□□□ -0
CLDND1-227ENST00000513452 ROCK2O75116 1388 aaKnown RBP15.05■□□□□ -0
CLDND1-227ENST00000513452 CD163L1Q9NR16 1453 aa15.05■□□□□ -0
CLDND1-227ENST00000513452 USP47Q96K76 1375 aa15.04■□□□□ -0
CLDND1-227ENST00000513452 WWC3Q9ULE0 1092 aa15.04■□□□□ -0
CLDND1-227ENST00000513452 C5P01031 1676 aa15.03■□□□□ -0
CLDND1-227ENST00000513452 MEGF6O75095 1541 aa15.02■□□□□ -0
CLDND1-227ENST00000513452 IP6K1Q92551 441 aa15.02■□□□□ -0
CLDND1-227ENST00000513452 EDC4Q6P2E9 1401 aaKnown RBP15.01□□□□□ -0.01
CLDND1-227ENST00000513452 KIF3CO14782 793 aa15.01□□□□□ -0.01
CLDND1-227ENST00000513452 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
CLDND1-227ENST00000513452 ZCRB1Q8TBF4 217 aaKnown RBP15.01□□□□□ -0.01
CLDND1-227ENST00000513452 TMC1Q8TDI8 760 aa15.01□□□□□ -0.01
CLDND1-227ENST00000513452 L3MBTL2Q969R5 705 aa15.01□□□□□ -0.01
CLDND1-227ENST00000513452 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
CLDND1-227ENST00000513452 APLP1P51693 650 aa14.99□□□□□ -0.01
CLDND1-227ENST00000513452 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
CLDND1-227ENST00000513452 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
CLDND1-227ENST00000513452 A0A1W2PP64 1363 aa14.98□□□□□ -0.01
CLDND1-227ENST00000513452 PALLDQ8WX93 1383 aa14.98□□□□□ -0.01
CLDND1-227ENST00000513452 SLC12A5Q9H2X9 1139 aa14.97□□□□□ -0.01
CLDND1-227ENST00000513452 RGPD2P0DJD1 1756 aa14.97□□□□□ -0.01
CLDND1-227ENST00000513452 MAP3K19Q56UN5 1328 aa14.96□□□□□ -0.01
CLDND1-227ENST00000513452 HOXC9P31274 260 aa14.96□□□□□ -0.01
CLDND1-227ENST00000513452 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 TAF1LQ8IZX4 1826 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 PHF14O94880 888 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 AMPHP49418 695 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 AMIGO3Q86WK7 504 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 AK7Q96M32 723 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 TERF2IPQ9NYB0 399 aa14.95□□□□□ -0.02
CLDND1-227ENST00000513452 CICQ96RK0 1608 aaPredicted RBP14.95□□□□□ -0.02
CLDND1-227ENST00000513452 USHBP1Q8N6Y0 703 aa14.94□□□□□ -0.02
CLDND1-227ENST00000513452 DNAJC5GQ8N7S2 189 aa14.94□□□□□ -0.02
CLDND1-227ENST00000513452 SMIM5Q71RC9 77 aa14.93□□□□□ -0.02
CLDND1-227ENST00000513452 FBLN1P23142 703 aa14.92□□□□□ -0.02
CLDND1-227ENST00000513452 HMGB2P26583 209 aaKnown RBP14.92□□□□□ -0.02
CLDND1-227ENST00000513452 COG3Q96JB2 828 aa14.92□□□□□ -0.02
CLDND1-227ENST00000513452 NSD3Q9BZ95 1437 aa14.92□□□□□ -0.02
CLDND1-227ENST00000513452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.91□□□□□ -0.02
CLDND1-227ENST00000513452 CAPN15O75808 1086 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 TOMM70O94826 608 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 NBPF6Q5VWK0 638 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 MPRIPQ6WCQ1 1025 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 RAPGEF4Q8WZA2 1011 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 NBPF4Q96M43 638 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 UBR3Q6ZT12 1888 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 PCDH11XQ9BZA7 1347 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 PCDH11YQ9BZA8 1340 aa14.91□□□□□ -0.02
CLDND1-227ENST00000513452 RTL1A6NKG5 1358 aa14.9□□□□□ -0.02
CLDND1-227ENST00000513452 WDR90Q96KV7 1748 aa14.9□□□□□ -0.02
CLDND1-227ENST00000513452 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
CLDND1-227ENST00000513452 POTEDQ86YR6 584 aa14.89□□□□□ -0.03
CLDND1-227ENST00000513452 SIN3AQ96ST3 1273 aa14.89□□□□□ -0.03
CLDND1-227ENST00000513452 NMRK2Q9NPI5 230 aa14.89□□□□□ -0.03
CLDND1-227ENST00000513452 PXDNLA1KZ92 1463 aa14.89□□□□□ -0.03
CLDND1-227ENST00000513452 TATP17735 454 aaPredicted RBP14.88□□□□□ -0.03
CLDND1-227ENST00000513452 RRS1Q15050 365 aaKnown RBP14.88□□□□□ -0.03
CLDND1-227ENST00000513452 COL13A1Q5TAT6 717 aaPredicted RBP14.88□□□□□ -0.03
CLDND1-227ENST00000513452 SMARCC1Q92922 1105 aaPredicted RBP14.88□□□□□ -0.03
CLDND1-227ENST00000513452 ADRA2BP18089 450 aa14.87□□□□□ -0.03
CLDND1-227ENST00000513452 SSFA2P28290 1259 aa14.87□□□□□ -0.03
CLDND1-227ENST00000513452 HTRA3P83110 453 aa14.87□□□□□ -0.03
CLDND1-227ENST00000513452 NEUROD1Q13562 356 aa14.87□□□□□ -0.03
CLDND1-227ENST00000513452 CARD11Q9BXL7 1154 aa14.87□□□□□ -0.03
CLDND1-227ENST00000513452 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
CLDND1-227ENST00000513452 BCS1LQ9Y276 419 aa14.86□□□□□ -0.03
CLDND1-227ENST00000513452 GNPATO15228 680 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 CYP27B1O15528 508 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 MMP10P09238 476 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 KLRG1Q96E93 195 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 KIAA1551Q9HCM1 1747 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 ITGB4P16144 1822 aa14.85□□□□□ -0.03
CLDND1-227ENST00000513452 N4BP2Q86UW6 1770 aaPredicted RBP14.84□□□□□ -0.03
CLDND1-227ENST00000513452 RBM46Q8TBY0 533 aaKnown RBP14.84□□□□□ -0.03
CLDND1-227ENST00000513452 PIGBQ92521 554 aa14.84□□□□□ -0.03
CLDND1-227ENST00000513452 KIF13BQ9NQT8 1826 aa14.83□□□□□ -0.04
CLDND1-227ENST00000513452 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
CLDND1-227ENST00000513452 SIK1P57059 783 aa14.83□□□□□ -0.04
CLDND1-227ENST00000513452 ARHGAP27Q6ZUM4 889 aa14.83□□□□□ -0.04
CLDND1-227ENST00000513452 C16orf71Q8IYS4 520 aaPredicted RBP14.83□□□□□ -0.04
CLDND1-227ENST00000513452 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
CLDND1-227ENST00000513452 MAP2P11137 1827 aaKnown RBP14.82□□□□□ -0.04
CLDND1-227ENST00000513452 A0A0G2JLW4 131 aa14.82□□□□□ -0.04
CLDND1-227ENST00000513452 JMYQ8N9B5 988 aa14.82□□□□□ -0.04
CLDND1-227ENST00000513452 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
CLDND1-227ENST00000513452 C10orf71Q711Q0 1435 aa14.82□□□□□ -0.04
CLDND1-227ENST00000513452 PKD1L3Q7Z443 1732 aa14.81□□□□□ -0.04
CLDND1-227ENST00000513452 TGFB2P61812 414 aa14.81□□□□□ -0.04
CLDND1-227ENST00000513452 ITPK1Q13572 414 aa14.81□□□□□ -0.04
CLDND1-227ENST00000513452 INSRP06213 1382 aa14.81□□□□□ -0.04
CLDND1-227ENST00000513452 FCHSD2O94868 740 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms