RNA–Protein interactions for RNA: ENST00000513314.1

DHFR-207, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-207ENST00000513314 PCDHB11Q9Y5F2 797 aa9.81□□□□□ -0.84
DHFR-207ENST00000513314 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
DHFR-207ENST00000513314 TBC1D2BQ9UPU7 963 aa9.8□□□□□ -0.84
DHFR-207ENST00000513314 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
DHFR-207ENST00000513314 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
DHFR-207ENST00000513314 MEN1O00255 615 aa9.79□□□□□ -0.84
DHFR-207ENST00000513314 GPC1P35052 558 aa9.79□□□□□ -0.84
DHFR-207ENST00000513314 CYP2U1Q7Z449 544 aa9.79□□□□□ -0.84
DHFR-207ENST00000513314 SCTRP47872 440 aa9.78□□□□□ -0.84
DHFR-207ENST00000513314 SV2AQ7L0J3 742 aa9.78□□□□□ -0.84
DHFR-207ENST00000513314 PRICKLE2Q7Z3G6 844 aa9.78□□□□□ -0.84
DHFR-207ENST00000513314 VWA5B2Q8N398 1253 aa9.78□□□□□ -0.84
DHFR-207ENST00000513314 CEP126Q9P2H0 1117 aa9.78□□□□□ -0.84
DHFR-207ENST00000513314 CDC14CA4D256 554 aa9.77□□□□□ -0.85
DHFR-207ENST00000513314 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
DHFR-207ENST00000513314 CNTNAP3BQ96NU0 1288 aa9.77□□□□□ -0.85
DHFR-207ENST00000513314 NLRP3Q96P20 1036 aa9.77□□□□□ -0.85
DHFR-207ENST00000513314 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
DHFR-207ENST00000513314 CNTNAP3Q9BZ76 1288 aa9.77□□□□□ -0.85
DHFR-207ENST00000513314 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
DHFR-207ENST00000513314 KRT76Q01546 638 aa9.76□□□□□ -0.85
DHFR-207ENST00000513314 TRAK2O60296 914 aa9.75□□□□□ -0.85
DHFR-207ENST00000513314 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
DHFR-207ENST00000513314 RHOQP17081 205 aa9.74□□□□□ -0.85
DHFR-207ENST00000513314 CLN3Q13286 438 aa9.74□□□□□ -0.85
DHFR-207ENST00000513314 IRF5Q13568 498 aa9.74□□□□□ -0.85
DHFR-207ENST00000513314 SLC27A3Q5K4L6 730 aa9.74□□□□□ -0.85
DHFR-207ENST00000513314 MYCP01106 439 aaPredicted RBP9.73□□□□□ -0.85
DHFR-207ENST00000513314 KCNMA1Q12791 1236 aa9.73□□□□□ -0.85
DHFR-207ENST00000513314 CCDC85AQ96PX6 553 aaPredicted RBP9.73□□□□□ -0.85
DHFR-207ENST00000513314 GNRH1P01148 92 aa9.72□□□□□ -0.85
DHFR-207ENST00000513314 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
DHFR-207ENST00000513314 GRIP2Q9C0E4 1043 aa9.72□□□□□ -0.85
DHFR-207ENST00000513314 ARHGEF10LQ9HCE6 1279 aa9.72□□□□□ -0.85
DHFR-207ENST00000513314 CDCA7Q9BWT1 371 aaPredicted RBP9.71□□□□□ -0.86
DHFR-207ENST00000513314 GDPD2Q9HCC8 539 aa9.71□□□□□ -0.86
DHFR-207ENST00000513314 POU4F2Q12837 409 aa9.7□□□□□ -0.86
DHFR-207ENST00000513314 SLFNL1Q499Z3 407 aa9.7□□□□□ -0.86
DHFR-207ENST00000513314 GMCL1Q96IK5 515 aa9.7□□□□□ -0.86
DHFR-207ENST00000513314 CUEDC1Q9NWM3 386 aaPredicted RBP9.7□□□□□ -0.86
DHFR-207ENST00000513314 ABL2P42684 1182 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 GSK3AP49840 483 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 VAC14Q08AM6 782 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 WASHC4Q2M389 1173 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 PHTF2Q8N3S3 785 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 DYRK1BQ9Y463 629 aa9.69□□□□□ -0.86
DHFR-207ENST00000513314 SPATA31C2B4DYI2 1134 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 USP4Q13107 963 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 WDR44Q5JSH3 913 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 NBPF10Q6P3W6 841 aaKnown RBP9.68□□□□□ -0.86
DHFR-207ENST00000513314 TRIM22Q8IYM9 498 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 NBPF15Q8N660 670 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 ESYT1Q9BSJ8 1104 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 RAB6BQ9NRW1 208 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 DOLKQ9UPQ8 538 aa9.68□□□□□ -0.86
DHFR-207ENST00000513314 MCM6Q14566 821 aa9.67□□□□□ -0.86
DHFR-207ENST00000513314 RIPOR1Q6ZS17 1223 aa9.67□□□□□ -0.86
DHFR-207ENST00000513314 RNF135Q8IUD6 432 aa9.67□□□□□ -0.86
DHFR-207ENST00000513314 CNKSR1Q969H4 720 aa9.67□□□□□ -0.86
DHFR-207ENST00000513314 IL2RAP01589 272 aa9.66□□□□□ -0.86
DHFR-207ENST00000513314 SLURP2P0DP57 97 aa9.66□□□□□ -0.86
DHFR-207ENST00000513314 TSGA10IPQ3SY00 556 aa9.66□□□□□ -0.86
DHFR-207ENST00000513314 FOXR1Q6PIV2 292 aa9.66□□□□□ -0.86
DHFR-207ENST00000513314 TAS1R3Q7RTX0 852 aa9.66□□□□□ -0.86
DHFR-207ENST00000513314 H7C1W4 665 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 CENPCQ03188 943 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 ESCO1Q5FWF5 840 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 SIRT1Q96EB6 747 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 ZNF837Q96EG3 531 aaPredicted RBP9.65□□□□□ -0.86
DHFR-207ENST00000513314 XAGE2Q96GT9 111 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
DHFR-207ENST00000513314 TIMMDC1Q9NPL8 285 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 ADAMTS8Q9UP79 889 aa9.65□□□□□ -0.86
DHFR-207ENST00000513314 WASLO00401 505 aaPredicted RBP9.64□□□□□ -0.87
DHFR-207ENST00000513314 DBN1Q16643 649 aa9.64□□□□□ -0.87
DHFR-207ENST00000513314 ZNF385CQ66K41 422 aaPredicted RBP9.64□□□□□ -0.87
DHFR-207ENST00000513314 CHIC2Q9UKJ5 165 aa9.64□□□□□ -0.87
DHFR-207ENST00000513314 SOX11P35716 441 aa9.63□□□□□ -0.87
DHFR-207ENST00000513314 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
DHFR-207ENST00000513314 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
DHFR-207ENST00000513314 SVOPQ8N4V2 548 aa9.63□□□□□ -0.87
DHFR-207ENST00000513314 ZSCAN10Q96SZ4 725 aaPredicted RBP9.63□□□□□ -0.87
DHFR-207ENST00000513314 HRH3Q9Y5N1 445 aa9.63□□□□□ -0.87
DHFR-207ENST00000513314 GTF2E1P29083 439 aaPredicted RBP9.62□□□□□ -0.87
DHFR-207ENST00000513314 GAS6Q14393 721 aa9.62□□□□□ -0.87
DHFR-207ENST00000513314 OXLD1Q5BKU9 147 aa9.62□□□□□ -0.87
DHFR-207ENST00000513314 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
DHFR-207ENST00000513314 F11P03951 625 aa9.61□□□□□ -0.87
DHFR-207ENST00000513314 MAP7D1Q3KQU3 841 aa9.61□□□□□ -0.87
DHFR-207ENST00000513314 WHAMMQ8TF30 809 aa9.61□□□□□ -0.87
DHFR-207ENST00000513314 RNF225M0QZC1 329 aaPredicted RBP9.6□□□□□ -0.87
DHFR-207ENST00000513314 GNASQ5JWF2 1037 aa9.6□□□□□ -0.87
DHFR-207ENST00000513314 TMEM214Q6NUQ4 689 aaKnown RBP9.6□□□□□ -0.87
DHFR-207ENST00000513314 GTPBP3Q969Y2 492 aaKnown RBP9.6□□□□□ -0.87
DHFR-207ENST00000513314 TRERF1Q96PN7 1200 aa9.6□□□□□ -0.87
DHFR-207ENST00000513314 FHDC1Q9C0D6 1143 aaPredicted RBP9.6□□□□□ -0.87
DHFR-207ENST00000513314 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
DHFR-207ENST00000513314 GPR25O00155 361 aa9.59□□□□□ -0.87
DHFR-207ENST00000513314 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
DHFR-207ENST00000513314 RASSF7Q02833 373 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms