RNA–Protein interactions for RNA: ENST00000513101.1

ACSF2-223, Transcript of acyl-CoA synthetase family member 2, human

TSL 4

Gene ACSF2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSF2-223	ENST00000513101	TRIM37	O94972	964 aa		11.78	□□□□□ -0.52
ACSF2-223	ENST00000513101	CNGB1	Q14028	1251 aa	Predicted RBP	11.78	□□□□□ -0.52
ACSF2-223	ENST00000513101	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.78	□□□□□ -0.52
ACSF2-223	ENST00000513101	PLEKHG2	Q9H7P9	1386 aa		11.78	□□□□□ -0.52
ACSF2-223	ENST00000513101	MAP2	P11137	1827 aa	Known RBP	11.77	□□□□□ -0.52
ACSF2-223	ENST00000513101	BAG6	P46379	1132 aa		11.77	□□□□□ -0.53
ACSF2-223	ENST00000513101	DDX54	Q8TDD1	881 aa	Known RBP	11.77	□□□□□ -0.53
ACSF2-223	ENST00000513101	MEGF6	O75095	1541 aa		11.76	□□□□□ -0.53
ACSF2-223	ENST00000513101	LRRC37A3	O60309	1634 aa		11.76	□□□□□ -0.53
ACSF2-223	ENST00000513101	DIAPH1	O60610	1272 aa	Known RBP	11.76	□□□□□ -0.53
ACSF2-223	ENST00000513101	PPP2R1A	P30153	589 aa		11.76	□□□□□ -0.53
ACSF2-223	ENST00000513101	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.76	□□□□□ -0.53
ACSF2-223	ENST00000513101	APBA3	O96018	575 aa		11.75	□□□□□ -0.53
ACSF2-223	ENST00000513101	DEFB132	Q7Z7B7	95 aa		11.75	□□□□□ -0.53
ACSF2-223	ENST00000513101	CFAP53	Q96M91	514 aa		11.75	□□□□□ -0.53
ACSF2-223	ENST00000513101	SPG7	Q9UQ90	795 aa		11.75	□□□□□ -0.53
ACSF2-223	ENST00000513101	PLSCR1	O15162	318 aa		11.74	□□□□□ -0.53
ACSF2-223	ENST00000513101	SULT6B1	Q6IMI4	303 aa		11.74	□□□□□ -0.53
ACSF2-223	ENST00000513101	PCDH11X	Q9BZA7	1347 aa		11.74	□□□□□ -0.53
ACSF2-223	ENST00000513101	PCDH11Y	Q9BZA8	1340 aa		11.74	□□□□□ -0.53
ACSF2-223	ENST00000513101	KDR	P35968	1356 aa		11.74	□□□□□ -0.53
ACSF2-223	ENST00000513101	CYP27B1	O15528	508 aa		11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	MSH5	O43196	834 aa		11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	EN1	Q05925	392 aa	Predicted RBP	11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	NKX1-1	Q15270	411 aa	Predicted RBP	11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	AMOT	Q4VCS5	1084 aa		11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	CAMKK2	Q96RR4	588 aa		11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	WNK3	Q9BYP7	1800 aa		11.73	□□□□□ -0.53
ACSF2-223	ENST00000513101	KCNQ2	O43526	872 aa		11.72	□□□□□ -0.53
ACSF2-223	ENST00000513101	CCDC184	Q52MB2	194 aa		11.72	□□□□□ -0.53
ACSF2-223	ENST00000513101	AEBP1	Q8IUX7	1158 aa		11.72	□□□□□ -0.53
ACSF2-223	ENST00000513101	NUDC	Q9Y266	331 aa		11.72	□□□□□ -0.53
ACSF2-223	ENST00000513101	PTF1A	Q7RTS3	328 aa		11.71	□□□□□ -0.53
ACSF2-223	ENST00000513101	IFNL2	Q8IZJ0	200 aa		11.71	□□□□□ -0.53
ACSF2-223	ENST00000513101	ACSBG1	Q96GR2	724 aa		11.71	□□□□□ -0.53
ACSF2-223	ENST00000513101	COL3A1	P02461	1466 aa	Predicted RBP	11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	RGPD2	P0DJD1	1756 aa		11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	PHKG2	P15735	406 aa		11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	EZH2	Q15910	746 aa	Known RBP	11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	PNISR	Q8TF01	805 aa	Known RBP	11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	MRS2	Q9HD23	443 aa		11.7	□□□□□ -0.54
ACSF2-223	ENST00000513101	U2SURP	O15042	1029 aa	Known RBP	11.69	□□□□□ -0.54
ACSF2-223	ENST00000513101	HSP90AB1	P08238	724 aa	Known RBP	11.69	□□□□□ -0.54
ACSF2-223	ENST00000513101	HMOX1	P09601	288 aa		11.69	□□□□□ -0.54
ACSF2-223	ENST00000513101	PRIM1	P49642	420 aa	Known RBP	11.69	□□□□□ -0.54
ACSF2-223	ENST00000513101	RGPD1	P0DJD0	1748 aa		11.69	□□□□□ -0.54
ACSF2-223	ENST00000513101	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.68	□□□□□ -0.54
ACSF2-223	ENST00000513101	PROM2	Q8N271	834 aa		11.67	□□□□□ -0.54
ACSF2-223	ENST00000513101	SYTL4	Q96C24	671 aa	Predicted RBP	11.67	□□□□□ -0.54
ACSF2-223	ENST00000513101	DCAF5	Q96JK2	942 aa		11.67	□□□□□ -0.54
ACSF2-223	ENST00000513101	FCHSD2	O94868	740 aa		11.66	□□□□□ -0.54
ACSF2-223	ENST00000513101	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.66	□□□□□ -0.54
ACSF2-223	ENST00000513101	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.66	□□□□□ -0.54
ACSF2-223	ENST00000513101	AKAP4	Q5JQC9	854 aa		11.66	□□□□□ -0.54
ACSF2-223	ENST00000513101	C1orf141	Q5JVX7	400 aa		11.66	□□□□□ -0.54
ACSF2-223	ENST00000513101	ERVV-2	B6SEH9	535 aa		11.65	□□□□□ -0.54
ACSF2-223	ENST00000513101	TXNRD1	Q16881	649 aa		11.65	□□□□□ -0.54
ACSF2-223	ENST00000513101	RSPH6A	Q9H0K4	717 aa		11.65	□□□□□ -0.54
ACSF2-223	ENST00000513101	PKD1L3	Q7Z443	1732 aa		11.65	□□□□□ -0.54
ACSF2-223	ENST00000513101	TNS1	Q9HBL0	1735 aa	Known RBP	11.65	□□□□□ -0.54
ACSF2-223	ENST00000513101	CENPB	P07199	599 aa	Predicted RBP	11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	MTHFSD	Q2M296	383 aa	Known RBP	11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	NBPF14	Q5TI25	921 aa		11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	MPRIP	Q6WCQ1	1025 aa		11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	GAS2L2	Q8NHY3	880 aa		11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	PIGB	Q92521	554 aa		11.64	□□□□□ -0.55
ACSF2-223	ENST00000513101	SHANK3	Q9BYB0	1731 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	SBF2	Q86WG5	1849 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	NHS	Q6T4R5	1651 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	HMGB2	P26583	209 aa	Known RBP	11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	PRKAR2B	P31323	418 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	SLC27A3	Q5K4L6	730 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	SMARCC1	Q92922	1105 aa	Predicted RBP	11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	PNN	Q9H307	717 aa	Known RBP	11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	TMOD3	Q9NYL9	352 aa		11.63	□□□□□ -0.55
ACSF2-223	ENST00000513101	PHACTR3	Q96KR7	559 aa		11.62	□□□□□ -0.55
ACSF2-223	ENST00000513101	RNMT	O43148	476 aa	Known RBP	11.61	□□□□□ -0.55
ACSF2-223	ENST00000513101	CABP4	P57796	275 aa		11.61	□□□□□ -0.55
ACSF2-223	ENST00000513101	GNAT3	A8MTJ3	354 aa		11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	NEFM	P07197	916 aa		11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	PLEKHF1	Q96S99	279 aa		11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	LRRC4B	Q9NT99	713 aa		11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	KDM6A	O15550	1401 aa	Predicted RBP	11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	ZBED9	Q6R2W3	1325 aa		11.6	□□□□□ -0.55
ACSF2-223	ENST00000513101	PALLD	Q8WX93	1383 aa		11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	R3HDM1	Q15032	1099 aa	Known RBP	11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	NFATC2IP	Q8NCF5	419 aa		11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	YTHDC1	Q96MU7	727 aa	Known RBP	11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	LGR6	Q9HBX8	967 aa		11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	LRP5	O75197	1615 aa		11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	RGPD4	Q7Z3J3	1758 aa		11.59	□□□□□ -0.55
ACSF2-223	ENST00000513101	HTATSF1	O43719	755 aa	Known RBP	11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	SLC15A2	Q16348	729 aa		11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	FAM9B	Q8IZU0	186 aa		11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	SLC52A2	Q9HAB3	445 aa		11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	ATG3	Q9NT62	314 aa		11.58	□□□□□ -0.56
ACSF2-223	ENST00000513101	STK32B	Q9NY57	414 aa		11.58	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms