RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 TERF2IPQ9NYB0 399 aa22.66■■□□□ 1.22
DDR1-269ENST00000512725 CD163L1Q9NR16 1453 aa22.65■■□□□ 1.22
DDR1-269ENST00000512725 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
DDR1-269ENST00000512725 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
DDR1-269ENST00000512725 CARD11Q9BXL7 1154 aa22.64■■□□□ 1.21
DDR1-269ENST00000512725 DOT1LQ8TEK3 1739 aa22.64■■□□□ 1.21
DDR1-269ENST00000512725 ANKRD36BQ8N2N9 1353 aa22.63■■□□□ 1.21
DDR1-269ENST00000512725 AMPHP49418 695 aa22.63■■□□□ 1.21
DDR1-269ENST00000512725 ZCRB1Q8TBF4 217 aaKnown RBP22.63■■□□□ 1.21
DDR1-269ENST00000512725 COL23A1Q86Y22 540 aaPredicted RBP22.62■■□□□ 1.21
DDR1-269ENST00000512725 COL24A1Q17RW2 1714 aa22.61■■□□□ 1.21
DDR1-269ENST00000512725 CEP350Q5VT06 3117 aa22.61■■□□□ 1.21
DDR1-269ENST00000512725 A0A1W2PP64 1363 aa22.61■■□□□ 1.21
DDR1-269ENST00000512725 ZNF526Q8TF50 670 aaPredicted RBP22.6■■□□□ 1.21
DDR1-269ENST00000512725 COG3Q96JB2 828 aa22.6■■□□□ 1.21
DDR1-269ENST00000512725 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
DDR1-269ENST00000512725 USP47Q96K76 1375 aa22.6■■□□□ 1.21
DDR1-269ENST00000512725 LY75O60449 1722 aa22.6■■□□□ 1.21
DDR1-269ENST00000512725 FBLN1P23142 703 aa22.59■■□□□ 1.21
DDR1-269ENST00000512725 ATP10DQ9P241 1426 aa22.58■■□□□ 1.21
DDR1-269ENST00000512725 GPBP1L1Q9HC44 474 aaPredicted RBP22.58■■□□□ 1.21
DDR1-269ENST00000512725 NSD2O96028 1365 aa22.58■■□□□ 1.21
DDR1-269ENST00000512725 HOXC9P31274 260 aa22.57■■□□□ 1.2
DDR1-269ENST00000512725 RGPD2P0DJD1 1756 aa22.57■■□□□ 1.2
DDR1-269ENST00000512725 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
DDR1-269ENST00000512725 USHBP1Q8N6Y0 703 aa22.56■■□□□ 1.2
DDR1-269ENST00000512725 WWC3Q9ULE0 1092 aa22.55■■□□□ 1.2
DDR1-269ENST00000512725 MEGF6O75095 1541 aa22.54■■□□□ 1.2
DDR1-269ENST00000512725 RAPGEF4Q8WZA2 1011 aa22.52■■□□□ 1.2
DDR1-269ENST00000512725 RRS1Q15050 365 aaKnown RBP22.51■■□□□ 1.19
DDR1-269ENST00000512725 CD2APQ9Y5K6 639 aa22.51■■□□□ 1.19
DDR1-269ENST00000512725 NBPF6Q5VWK0 638 aa22.5■■□□□ 1.19
DDR1-269ENST00000512725 NBPF4Q96M43 638 aa22.5■■□□□ 1.19
DDR1-269ENST00000512725 TATP17735 454 aaPredicted RBP22.49■■□□□ 1.19
DDR1-269ENST00000512725 MPRIPQ6WCQ1 1025 aa22.49■■□□□ 1.19
DDR1-269ENST00000512725 FLAD1Q8NFF5 587 aa22.49■■□□□ 1.19
DDR1-269ENST00000512725 C5P01031 1676 aa22.49■■□□□ 1.19
DDR1-269ENST00000512725 PHF14O94880 888 aa22.48■■□□□ 1.19
DDR1-269ENST00000512725 AK7Q96M32 723 aa22.48■■□□□ 1.19
DDR1-269ENST00000512725 HSPA6P17066 643 aa22.47■■□□□ 1.19
DDR1-269ENST00000512725 PALLDQ8WX93 1383 aa22.47■■□□□ 1.19
DDR1-269ENST00000512725 SMG6Q86US8 1419 aaKnown RBP22.47■■□□□ 1.19
DDR1-269ENST00000512725 HMGB2P26583 209 aaKnown RBP22.45■■□□□ 1.18
DDR1-269ENST00000512725 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
DDR1-269ENST00000512725 SMIM5Q71RC9 77 aa22.44■■□□□ 1.18
DDR1-269ENST00000512725 IGSF1Q8N6C5 1336 aa22.44■■□□□ 1.18
DDR1-269ENST00000512725 PUS7Q96PZ0 661 aaKnown RBP22.44■■□□□ 1.18
DDR1-269ENST00000512725 PCDH11XQ9BZA7 1347 aa22.44■■□□□ 1.18
DDR1-269ENST00000512725 PCDH11YQ9BZA8 1340 aa22.44■■□□□ 1.18
DDR1-269ENST00000512725 GGNBP2Q9H3C7 697 aa22.44■■□□□ 1.18
DDR1-269ENST00000512725 RTL1A6NKG5 1358 aa22.42■■□□□ 1.18
DDR1-269ENST00000512725 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
DDR1-269ENST00000512725 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
DDR1-269ENST00000512725 ST20-MTHFSA0A0A6YYL1 179 aa22.4■■□□□ 1.18
DDR1-269ENST00000512725 SMARCC1Q92922 1105 aaPredicted RBP22.4■■□□□ 1.18
DDR1-269ENST00000512725 C4BP0C0L5 1744 aa22.39■■□□□ 1.17
DDR1-269ENST00000512725 ADCY9O60503 1353 aa22.38■■□□□ 1.17
DDR1-269ENST00000512725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.38■■□□□ 1.17
DDR1-269ENST00000512725 HSP90AB2PQ58FF8 381 aa22.38■■□□□ 1.17
DDR1-269ENST00000512725 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
DDR1-269ENST00000512725 FYB1O15117 783 aa22.36■■□□□ 1.17
DDR1-269ENST00000512725 CYP27B1O15528 508 aa22.36■■□□□ 1.17
DDR1-269ENST00000512725 TESK2Q96S53 571 aa22.36■■□□□ 1.17
DDR1-269ENST00000512725 ITGB4P16144 1822 aa22.34■■□□□ 1.17
DDR1-269ENST00000512725 NSD3Q9BZ95 1437 aa22.34■■□□□ 1.17
DDR1-269ENST00000512725 PIGBQ92521 554 aa22.34■■□□□ 1.17
DDR1-269ENST00000512725 INSRP06213 1382 aa22.33■■□□□ 1.17
DDR1-269ENST00000512725 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 KIF3CO14782 793 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 GNPATO15228 680 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 PPM1GO15355 546 aaPredicted RBP22.32■■□□□ 1.16
DDR1-269ENST00000512725 SSFA2P28290 1259 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 FLT4P35916 1363 aa22.32■■□□□ 1.16
DDR1-269ENST00000512725 TOGARAM1Q9Y4F4 1720 aa22.31■■□□□ 1.16
DDR1-269ENST00000512725 SLC24A1O60721 1099 aa22.31■■□□□ 1.16
DDR1-269ENST00000512725 LOC102724428A0A0B4J2F2 783 aa22.3■■□□□ 1.16
DDR1-269ENST00000512725 SIK1P57059 783 aa22.3■■□□□ 1.16
DDR1-269ENST00000512725 TMOD3Q9NYL9 352 aa22.29■■□□□ 1.16
DDR1-269ENST00000512725 SPG7Q9UQ90 795 aa22.29■■□□□ 1.16
DDR1-269ENST00000512725 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
DDR1-269ENST00000512725 APLP1P51693 650 aa22.28■■□□□ 1.16
DDR1-269ENST00000512725 BCS1LQ9Y276 419 aa22.28■■□□□ 1.16
DDR1-269ENST00000512725 EMILIN1Q9Y6C2 1016 aa22.28■■□□□ 1.16
DDR1-269ENST00000512725 MMP10P09238 476 aa22.27■■□□□ 1.16
DDR1-269ENST00000512725 TMF1P82094 1093 aa22.27■■□□□ 1.16
DDR1-269ENST00000512725 KIF20BQ96Q89 1820 aa22.27■■□□□ 1.15
DDR1-269ENST00000512725 ARHGAP27Q6ZUM4 889 aa22.26■■□□□ 1.15
DDR1-269ENST00000512725 ASAP1Q9ULH1 1129 aa22.26■■□□□ 1.15
DDR1-269ENST00000512725 A0A0G2JLW4 131 aa22.24■■□□□ 1.15
DDR1-269ENST00000512725 ITPK1Q13572 414 aa22.24■■□□□ 1.15
DDR1-269ENST00000512725 PKD1L3Q7Z443 1732 aa22.23■■□□□ 1.15
DDR1-269ENST00000512725 TOMM70O94826 608 aa22.23■■□□□ 1.15
DDR1-269ENST00000512725 N4BP2Q86UW6 1770 aaPredicted RBP22.22■■□□□ 1.15
DDR1-269ENST00000512725 NKX1-1Q15270 411 aaPredicted RBP22.22■■□□□ 1.15
DDR1-269ENST00000512725 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
DDR1-269ENST00000512725 FCHSD2O94868 740 aa22.21■■□□□ 1.15
DDR1-269ENST00000512725 MAP2P11137 1827 aaKnown RBP22.21■■□□□ 1.15
DDR1-269ENST00000512725 TGFB2P61812 414 aa22.2■■□□□ 1.14
DDR1-269ENST00000512725 TRAPPC3LQ5T215 181 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms