RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 ARXQ96QS3 562 aa17.12■□□□□ 0.33
DEPDC1B-206ENST00000512452 SGIP1Q9BQI5 828 aa17.12■□□□□ 0.33
DEPDC1B-206ENST00000512452 USP31Q70CQ4 1352 aa17.12■□□□□ 0.33
DEPDC1B-206ENST00000512452 ATP10DQ9P241 1426 aa17.12■□□□□ 0.33
DEPDC1B-206ENST00000512452 PLEKHF1Q96S99 279 aa17.11■□□□□ 0.33
DEPDC1B-206ENST00000512452 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
DEPDC1B-206ENST00000512452 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
DEPDC1B-206ENST00000512452 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
DEPDC1B-206ENST00000512452 PIAS4Q8N2W9 510 aaPredicted RBP17.1■□□□□ 0.33
DEPDC1B-206ENST00000512452 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.1■□□□□ 0.33
DEPDC1B-206ENST00000512452 MTFR1LQ9H019 292 aa17.1■□□□□ 0.33
DEPDC1B-206ENST00000512452 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
DEPDC1B-206ENST00000512452 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
DEPDC1B-206ENST00000512452 LMOD2Q6P5Q4 547 aa17.09■□□□□ 0.33
DEPDC1B-206ENST00000512452 BCL11BQ9C0K0 894 aaPredicted RBP17.09■□□□□ 0.33
DEPDC1B-206ENST00000512452 USP54Q70EL1 1684 aa17.09■□□□□ 0.33
DEPDC1B-206ENST00000512452 IL16Q14005 1332 aa17.08■□□□□ 0.32
DEPDC1B-206ENST00000512452 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
DEPDC1B-206ENST00000512452 PLSCR1O15162 318 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 NEFMP07197 916 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 IL13P35225 146 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 PSME1Q06323 249 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 MYH16Q9H6N6 1097 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 WWC3Q9ULE0 1092 aa17.06■□□□□ 0.32
DEPDC1B-206ENST00000512452 CT47B1P0C2W7 299 aaPredicted RBP17.05■□□□□ 0.32
DEPDC1B-206ENST00000512452 TMPOP42166 694 aaKnown RBP17.05■□□□□ 0.32
DEPDC1B-206ENST00000512452 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 SPATA31A1Q5TZJ5 1347 aa17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
DEPDC1B-206ENST00000512452 RGPD8O14715 1765 aaPredicted RBP17.03■□□□□ 0.32
DEPDC1B-206ENST00000512452 ABCA3Q99758 1704 aa17.03■□□□□ 0.32
DEPDC1B-206ENST00000512452 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
DEPDC1B-206ENST00000512452 CCDC136Q96JN2 1154 aa17.02■□□□□ 0.32
DEPDC1B-206ENST00000512452 STK32BQ9NY57 414 aa17.02■□□□□ 0.32
DEPDC1B-206ENST00000512452 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
DEPDC1B-206ENST00000512452 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 JMYQ8N9B5 988 aa17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 PMFBP1Q8TBY8 1022 aa17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 RRP7AQ9Y3A4 280 aaKnown RBP17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 COL14A1Q05707 1796 aaKnown RBP17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
DEPDC1B-206ENST00000512452 CALD1Q05682 793 aaKnown RBP17■□□□□ 0.31
DEPDC1B-206ENST00000512452 NEUROD2Q15784 382 aa17■□□□□ 0.31
DEPDC1B-206ENST00000512452 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
DEPDC1B-206ENST00000512452 KLHL34Q8N239 644 aa17■□□□□ 0.31
DEPDC1B-206ENST00000512452 PHF8Q9UPP1 1060 aa17■□□□□ 0.31
DEPDC1B-206ENST00000512452 NFE2L2Q16236 605 aa16.99■□□□□ 0.31
DEPDC1B-206ENST00000512452 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
DEPDC1B-206ENST00000512452 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
DEPDC1B-206ENST00000512452 SBNO1A3KN83 1393 aa16.99■□□□□ 0.31
DEPDC1B-206ENST00000512452 PRKAR2BP31323 418 aa16.98■□□□□ 0.31
DEPDC1B-206ENST00000512452 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
DEPDC1B-206ENST00000512452 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
DEPDC1B-206ENST00000512452 EXOC6Q8TAG9 804 aa16.98■□□□□ 0.31
DEPDC1B-206ENST00000512452 FLT4P35916 1363 aa16.98■□□□□ 0.31
DEPDC1B-206ENST00000512452 RIPK4P57078 832 aa16.97■□□□□ 0.31
DEPDC1B-206ENST00000512452 PROM2Q8N271 834 aa16.97■□□□□ 0.31
DEPDC1B-206ENST00000512452 KLRG1Q96E93 195 aa16.97■□□□□ 0.31
DEPDC1B-206ENST00000512452 FBLN1P23142 703 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 TSHZ2Q9NRE2 1034 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 USP35Q9P2H5 1018 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 RGPD3A6NKT7 1758 aaPredicted RBP16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 RGPD4Q7Z3J3 1758 aa16.96■□□□□ 0.31
DEPDC1B-206ENST00000512452 PEAK1Q9H792 1746 aa16.96■□□□□ 0.3
DEPDC1B-206ENST00000512452 KIF3CO14782 793 aa16.95■□□□□ 0.3
DEPDC1B-206ENST00000512452 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
DEPDC1B-206ENST00000512452 BARGINQ6ZT62 677 aa16.95■□□□□ 0.3
DEPDC1B-206ENST00000512452 RTL1A6NKG5 1358 aa16.94■□□□□ 0.3
DEPDC1B-206ENST00000512452 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
DEPDC1B-206ENST00000512452 STRN4Q9NRL3 753 aa16.94■□□□□ 0.3
DEPDC1B-206ENST00000512452 PLIN1O60240 522 aa16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 AAMPQ13685 434 aa16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 CRBNQ96SW2 442 aa16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 MAP3K19Q56UN5 1328 aa16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 FANCIQ9NVI1 1328 aa16.93■□□□□ 0.3
DEPDC1B-206ENST00000512452 NLRP6P59044 892 aa16.92■□□□□ 0.3
DEPDC1B-206ENST00000512452 ZNF428Q96B54 188 aa16.92■□□□□ 0.3
DEPDC1B-206ENST00000512452 HMOX1P09601 288 aa16.91■□□□□ 0.3
DEPDC1B-206ENST00000512452 PRDM11Q9NQV5 511 aa16.91■□□□□ 0.3
DEPDC1B-206ENST00000512452 ADCY9O60503 1353 aa16.9■□□□□ 0.3
DEPDC1B-206ENST00000512452 MS4A1P11836 297 aa16.9■□□□□ 0.3
DEPDC1B-206ENST00000512452 NLGN2Q8NFZ4 835 aa16.9■□□□□ 0.3
DEPDC1B-206ENST00000512452 KDRP35968 1356 aa16.89■□□□□ 0.3
DEPDC1B-206ENST00000512452 BCAR3O75815 825 aa16.89■□□□□ 0.29
DEPDC1B-206ENST00000512452 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
DEPDC1B-206ENST00000512452 PHACTR3Q96KR7 559 aa16.89■□□□□ 0.29
DEPDC1B-206ENST00000512452 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
DEPDC1B-206ENST00000512452 PHRF1Q9P1Y6 1649 aaKnown RBP16.88■□□□□ 0.29
DEPDC1B-206ENST00000512452 AMPHP49418 695 aa16.88■□□□□ 0.29
DEPDC1B-206ENST00000512452 GNAI1P63096 354 aa16.88■□□□□ 0.29
DEPDC1B-206ENST00000512452 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
DEPDC1B-206ENST00000512452 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
DEPDC1B-206ENST00000512452 KCNH5Q8NCM2 988 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms