RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 KCNQ4P56696 695 aa11.46□□□□□ -0.57
DEPDC1B-205ENST00000512078 TNRC6CQ9HCJ0 1690 aaKnown RBP11.46□□□□□ -0.57
DEPDC1B-205ENST00000512078 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.58
DEPDC1B-205ENST00000512078 IL2RBP14784 551 aa11.45□□□□□ -0.58
DEPDC1B-205ENST00000512078 C10orf71Q711Q0 1435 aa11.45□□□□□ -0.58
DEPDC1B-205ENST00000512078 KCNH5Q8NCM2 988 aa11.45□□□□□ -0.58
DEPDC1B-205ENST00000512078 LTN1O94822 1766 aa11.44□□□□□ -0.58
DEPDC1B-205ENST00000512078 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
DEPDC1B-205ENST00000512078 TOGARAM1Q9Y4F4 1720 aa11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 BRCA1P38398 1863 aaKnown RBP11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 NSD2O96028 1365 aa11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 CCNL1Q9UK58 526 aaPredicted RBP11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 UBR3Q6ZT12 1888 aa11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
DEPDC1B-205ENST00000512078 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
DEPDC1B-205ENST00000512078 ERBB3P21860 1342 aa11.42□□□□□ -0.58
DEPDC1B-205ENST00000512078 ARFGEF1Q9Y6D6 1849 aa11.42□□□□□ -0.58
DEPDC1B-205ENST00000512078 PLEKHG2Q9H7P9 1386 aa11.42□□□□□ -0.58
DEPDC1B-205ENST00000512078 FLAD1Q8NFF5 587 aa11.41□□□□□ -0.58
DEPDC1B-205ENST00000512078 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
DEPDC1B-205ENST00000512078 KIAA1210Q9ULL0 1709 aa11.41□□□□□ -0.58
DEPDC1B-205ENST00000512078 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
DEPDC1B-205ENST00000512078 NLRP2Q9NX02 1062 aa11.4□□□□□ -0.58
DEPDC1B-205ENST00000512078 C4BP0C0L5 1744 aa11.39□□□□□ -0.59
DEPDC1B-205ENST00000512078 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
DEPDC1B-205ENST00000512078 KCPQ6ZWJ8 1503 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 SBF1O95248 1867 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 SOX12O15370 315 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 PRIM1P49642 420 aaKnown RBP11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 SMC1BQ8NDV3 1235 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 SYTL4Q96C24 671 aaPredicted RBP11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
DEPDC1B-205ENST00000512078 HMGB2P26583 209 aaKnown RBP11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 CABP2Q9NPB3 220 aa11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 CABP1Q9NZU7 370 aa11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 KDM2AQ9Y2K7 1162 aa11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 TTC21BQ7Z4L5 1316 aa11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 KDM2BQ8NHM5 1336 aa11.37□□□□□ -0.59
DEPDC1B-205ENST00000512078 USP47Q96K76 1375 aa11.36□□□□□ -0.59
DEPDC1B-205ENST00000512078 DDX54Q8TDD1 881 aaKnown RBP11.36□□□□□ -0.59
DEPDC1B-205ENST00000512078 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
DEPDC1B-205ENST00000512078 MON2Q7Z3U7 1717 aa11.35□□□□□ -0.59
DEPDC1B-205ENST00000512078 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
DEPDC1B-205ENST00000512078 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
DEPDC1B-205ENST00000512078 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
DEPDC1B-205ENST00000512078 ARHGAP27Q6ZUM4 889 aa11.34□□□□□ -0.59
DEPDC1B-205ENST00000512078 BCS1LQ9Y276 419 aa11.34□□□□□ -0.59
DEPDC1B-205ENST00000512078 NSD3Q9BZ95 1437 aa11.34□□□□□ -0.59
DEPDC1B-205ENST00000512078 C9orf131Q5VYM1 1079 aa11.33□□□□□ -0.6
DEPDC1B-205ENST00000512078 ANKRD24Q8TF21 1146 aa11.33□□□□□ -0.6
DEPDC1B-205ENST00000512078 RRAGCQ9HB90 399 aa11.33□□□□□ -0.6
DEPDC1B-205ENST00000512078 RGPD2P0DJD1 1756 aa11.32□□□□□ -0.6
DEPDC1B-205ENST00000512078 TGFB2P61812 414 aa11.32□□□□□ -0.6
DEPDC1B-205ENST00000512078 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
DEPDC1B-205ENST00000512078 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
DEPDC1B-205ENST00000512078 ITGB4P16144 1822 aa11.31□□□□□ -0.6
DEPDC1B-205ENST00000512078 FOXN1O15353 648 aa11.31□□□□□ -0.6
DEPDC1B-205ENST00000512078 MAP2P11137 1827 aaKnown RBP11.31□□□□□ -0.6
DEPDC1B-205ENST00000512078 USP31Q70CQ4 1352 aa11.3□□□□□ -0.6
DEPDC1B-205ENST00000512078 CENPJQ9HC77 1338 aaPredicted RBP11.3□□□□□ -0.6
DEPDC1B-205ENST00000512078 AK7Q96M32 723 aa11.3□□□□□ -0.6
DEPDC1B-205ENST00000512078 VIRMAQ69YN4 1812 aaKnown RBP11.29□□□□□ -0.6
DEPDC1B-205ENST00000512078 PDE4DIPQ5VU43 2346 aa11.29□□□□□ -0.6
DEPDC1B-205ENST00000512078 MLLT1Q03111 559 aaPredicted RBP11.29□□□□□ -0.6
DEPDC1B-205ENST00000512078 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
DEPDC1B-205ENST00000512078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 FCHSD2O94868 740 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 SSFA2P28290 1259 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 C4AP0C0L4 1744 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 PHF14O94880 888 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 RGS19P49795 217 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 MEGF6O75095 1541 aa11.28□□□□□ -0.6
DEPDC1B-205ENST00000512078 CCDC88AQ3V6T2 1871 aa11.27□□□□□ -0.6
DEPDC1B-205ENST00000512078 CTCFP49711 727 aaPredicted RBP11.27□□□□□ -0.61
DEPDC1B-205ENST00000512078 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
DEPDC1B-205ENST00000512078 ZCRB1Q8TBF4 217 aaKnown RBP11.27□□□□□ -0.61
DEPDC1B-205ENST00000512078 RNF181Q9P0P0 153 aa11.27□□□□□ -0.61
DEPDC1B-205ENST00000512078 TIAM2Q8IVF5 1701 aa11.27□□□□□ -0.61
DEPDC1B-205ENST00000512078 ZC3H4Q9UPT8 1303 aaKnown RBP11.26□□□□□ -0.61
DEPDC1B-205ENST00000512078 MMP10P09238 476 aa11.26□□□□□ -0.61
DEPDC1B-205ENST00000512078 DPEP1P16444 411 aa11.26□□□□□ -0.61
DEPDC1B-205ENST00000512078 DCAF5Q96JK2 942 aa11.25□□□□□ -0.61
DEPDC1B-205ENST00000512078 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
DEPDC1B-205ENST00000512078 VEGFAP15692 232 aaPredicted RBP11.24□□□□□ -0.61
DEPDC1B-205ENST00000512078 CREBZFQ9NS37 354 aa11.24□□□□□ -0.61
DEPDC1B-205ENST00000512078 MKRN1Q9UHC7 482 aaKnown RBP11.24□□□□□ -0.61
DEPDC1B-205ENST00000512078 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
DEPDC1B-205ENST00000512078 KDM6AO15550 1401 aaPredicted RBP11.23□□□□□ -0.61
DEPDC1B-205ENST00000512078 EVC2Q86UK5 1308 aa11.23□□□□□ -0.61
DEPDC1B-205ENST00000512078 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
DEPDC1B-205ENST00000512078 KCNA3P22001 575 aa11.23□□□□□ -0.61
DEPDC1B-205ENST00000512078 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
DEPDC1B-205ENST00000512078 IP6K1Q92551 441 aa11.22□□□□□ -0.61
DEPDC1B-205ENST00000512078 SMARCC1Q92922 1105 aaPredicted RBP11.22□□□□□ -0.61
DEPDC1B-205ENST00000512078 CCDC87Q9NVE4 849 aa11.22□□□□□ -0.61
DEPDC1B-205ENST00000512078 GLTPD2A6NH11 291 aa11.21□□□□□ -0.61
DEPDC1B-205ENST00000512078 LBX1P52954 281 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms