RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 CCDC196A0A1B0GTZ2 297 aa16.94■□□□□ 0.3
TRIO-218ENST00000512070 MCM5P33992 734 aa16.94■□□□□ 0.3
TRIO-218ENST00000512070 SPA17Q15506 151 aa16.94■□□□□ 0.3
TRIO-218ENST00000512070 CCDC102AQ96A19 550 aa16.94■□□□□ 0.3
TRIO-218ENST00000512070 SCAND2PQ9GZW5 306 aaPredicted RBP16.94■□□□□ 0.3
TRIO-218ENST00000512070 CASKIN1Q8WXD9 1431 aa16.94■□□□□ 0.3
TRIO-218ENST00000512070 MAP2K1Q02750 393 aaPredicted RBP16.94■□□□□ 0.3
TRIO-218ENST00000512070 FILIP1Q7Z7B0 1213 aa16.93■□□□□ 0.3
TRIO-218ENST00000512070 KIF20AO95235 890 aa16.93■□□□□ 0.3
TRIO-218ENST00000512070 RAB34Q9BZG1 259 aa16.93■□□□□ 0.3
TRIO-218ENST00000512070 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
TRIO-218ENST00000512070 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
TRIO-218ENST00000512070 PYM1Q9BRP8 204 aaKnown RBP16.93■□□□□ 0.3
TRIO-218ENST00000512070 DNAJC2Q99543 621 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 CGNQ9P2M7 1197 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 EIF5P55010 431 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 AIMP1Q12904 312 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 UBAC1Q9BSL1 405 aa16.92■□□□□ 0.3
TRIO-218ENST00000512070 ZNF692Q9BU19 519 aaPredicted RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
TRIO-218ENST00000512070 UNC13AQ9UPW8 1703 aa16.92■□□□□ 0.3
TRIO-218ENST00000512070 HMOX1P09601 288 aa16.92■□□□□ 0.3
TRIO-218ENST00000512070 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
TRIO-218ENST00000512070 DHX29Q7Z478 1369 aaKnown RBP16.91■□□□□ 0.3
TRIO-218ENST00000512070 CFTRP13569 1480 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 GSDMDP57764 484 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 TNIP1Q15025 636 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 PTPN14Q15678 1187 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 BACH2Q9BYV9 841 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 FKBP15Q5T1M5 1219 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 SH2B1Q9NRF2 756 aaPredicted RBP16.91■□□□□ 0.3
TRIO-218ENST00000512070 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
TRIO-218ENST00000512070 ATF7IPQ6VMQ6 1270 aa16.91■□□□□ 0.3
TRIO-218ENST00000512070 SKIDA1Q1XH10 827 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 MTHFSP49914 203 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 ANO10Q9NW15 660 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 NLRP2Q9NX02 1062 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 HMGXB3Q12766 1538 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 PDZRN3Q9UPQ7 1066 aa16.9■□□□□ 0.3
TRIO-218ENST00000512070 MVPQ14764 893 aaKnown RBP16.89■□□□□ 0.3
TRIO-218ENST00000512070 NEBLO76041 1014 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 CCDC183Q5T5S1 534 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 TOP2BQ02880 1626 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 SYNJ2O15056 1496 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 ATP2B1P20020 1258 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 TUBB4BP68371 445 aa16.89■□□□□ 0.29
TRIO-218ENST00000512070 GIGYF2Q6Y7W6 1299 aaKnown RBP16.89■□□□□ 0.29
TRIO-218ENST00000512070 CHD1LQ86WJ1 897 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 TSG101Q99816 390 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 ANAPC15P60006 121 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 USO1O60763 962 aaKnown RBP16.88■□□□□ 0.29
TRIO-218ENST00000512070 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
TRIO-218ENST00000512070 CCDC150Q8NCX0 1101 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 MPHOSPH8Q99549 860 aa16.88■□□□□ 0.29
TRIO-218ENST00000512070 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIO-218ENST00000512070 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 MCM4P33991 863 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 NCOA2Q15596 1464 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 HOOK3Q86VS8 718 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 CASQ1P31415 396 aa16.87■□□□□ 0.29
TRIO-218ENST00000512070 ADAMTS8Q9UP79 889 aa16.86■□□□□ 0.29
TRIO-218ENST00000512070 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
TRIO-218ENST00000512070 PAFAH1B1P43034 410 aa16.86■□□□□ 0.29
TRIO-218ENST00000512070 NLRP6P59044 892 aa16.86■□□□□ 0.29
TRIO-218ENST00000512070 SEC63Q9UGP8 760 aaKnown RBP16.86■□□□□ 0.29
TRIO-218ENST00000512070 CETN1Q12798 172 aa16.86■□□□□ 0.29
TRIO-218ENST00000512070 RPAP2Q8IXW5 612 aaPredicted RBP16.85■□□□□ 0.29
TRIO-218ENST00000512070 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
TRIO-218ENST00000512070 ALS2CR12Q96Q35 445 aa16.85■□□□□ 0.29
TRIO-218ENST00000512070 CCDC175P0C221 793 aa16.85■□□□□ 0.29
TRIO-218ENST00000512070 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
TRIO-218ENST00000512070 NOB1Q9ULX3 412 aaKnown RBP16.85■□□□□ 0.29
TRIO-218ENST00000512070 PPP4R3AQ6IN85 833 aa16.85■□□□□ 0.29
TRIO-218ENST00000512070 FERMT1Q9BQL6 677 aa16.85■□□□□ 0.29
TRIO-218ENST00000512070 ABTB2Q8N961 1025 aa16.85■□□□□ 0.29
TRIO-218ENST00000512070 ZHX3Q9H4I2 956 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 SEPT11Q9NVA2 429 aaKnown RBP16.84■□□□□ 0.29
TRIO-218ENST00000512070 CCDC141Q6ZP82 1450 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 PPP2R1AP30153 589 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 SPG7Q9UQ90 795 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 AKAP2Q9Y2D5 859 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 TDO2P48775 406 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 IFFO1Q0D2I5 559 aa16.84■□□□□ 0.29
TRIO-218ENST00000512070 PRKAR2BP31323 418 aa16.83■□□□□ 0.29
TRIO-218ENST00000512070 C6orf163Q5TEZ5 329 aa16.83■□□□□ 0.28
TRIO-218ENST00000512070 FAM193AP78312 1265 aa16.83■□□□□ 0.28
TRIO-218ENST00000512070 SREK1Q8WXA9 508 aaKnown RBP16.83■□□□□ 0.28
TRIO-218ENST00000512070 CEP63Q96MT8 703 aa16.83■□□□□ 0.28
TRIO-218ENST00000512070 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms