RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 KIF24Q5T7B8 1368 aa18.27■□□□□ 0.51
RNF4-215ENST00000511843 PARD3Q8TEW0 1356 aa18.27■□□□□ 0.51
RNF4-215ENST00000511843 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
RNF4-215ENST00000511843 NSD2O96028 1365 aa18.23■□□□□ 0.51
RNF4-215ENST00000511843 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
RNF4-215ENST00000511843 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
RNF4-215ENST00000511843 PLSCR1O15162 318 aa18.22■□□□□ 0.51
RNF4-215ENST00000511843 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
RNF4-215ENST00000511843 ZCRB1Q8TBF4 217 aaKnown RBP18.22■□□□□ 0.51
RNF4-215ENST00000511843 RAPGEF4Q8WZA2 1011 aa18.22■□□□□ 0.51
RNF4-215ENST00000511843 LRP5O75197 1615 aa18.21■□□□□ 0.51
RNF4-215ENST00000511843 PROM2Q8N271 834 aa18.21■□□□□ 0.51
RNF4-215ENST00000511843 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
RNF4-215ENST00000511843 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
RNF4-215ENST00000511843 NCAPD2Q15021 1401 aa18.2■□□□□ 0.5
RNF4-215ENST00000511843 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
RNF4-215ENST00000511843 ITGB4P16144 1822 aa18.19■□□□□ 0.5
RNF4-215ENST00000511843 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
RNF4-215ENST00000511843 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
RNF4-215ENST00000511843 EYA1Q99502 592 aa18.19■□□□□ 0.5
RNF4-215ENST00000511843 ANO8Q9HCE9 1232 aaPredicted RBP18.19■□□□□ 0.5
RNF4-215ENST00000511843 SYTL4Q96C24 671 aaPredicted RBP18.18■□□□□ 0.5
RNF4-215ENST00000511843 TXNRD1Q16881 649 aa18.17■□□□□ 0.5
RNF4-215ENST00000511843 NBPF14Q5TI25 921 aa18.17■□□□□ 0.5
RNF4-215ENST00000511843 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
RNF4-215ENST00000511843 PRIM1P49642 420 aaKnown RBP18.16■□□□□ 0.5
RNF4-215ENST00000511843 CC2D1BQ5T0F9 858 aaKnown RBP18.16■□□□□ 0.5
RNF4-215ENST00000511843 LY75O60449 1722 aa18.15■□□□□ 0.5
RNF4-215ENST00000511843 CASZ1Q86V15 1759 aa18.15■□□□□ 0.5
RNF4-215ENST00000511843 PAPPAQ13219 1627 aa18.14■□□□□ 0.49
RNF4-215ENST00000511843 CYP27B1O15528 508 aa18.14■□□□□ 0.49
RNF4-215ENST00000511843 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
RNF4-215ENST00000511843 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
RNF4-215ENST00000511843 TUBGCP6Q96RT7 1819 aa18.12■□□□□ 0.49
RNF4-215ENST00000511843 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
RNF4-215ENST00000511843 KCNQ4P56696 695 aa18.11■□□□□ 0.49
RNF4-215ENST00000511843 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
RNF4-215ENST00000511843 LRRC4BQ9NT99 713 aa18.1■□□□□ 0.49
RNF4-215ENST00000511843 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
RNF4-215ENST00000511843 MTHFSP49914 203 aa18.08■□□□□ 0.48
RNF4-215ENST00000511843 STK32BQ9NY57 414 aa18.08■□□□□ 0.48
RNF4-215ENST00000511843 SPG7Q9UQ90 795 aa18.08■□□□□ 0.48
RNF4-215ENST00000511843 TAF1LQ8IZX4 1826 aa18.07■□□□□ 0.48
RNF4-215ENST00000511843 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
RNF4-215ENST00000511843 SLC15A2Q16348 729 aa18.06■□□□□ 0.48
RNF4-215ENST00000511843 ZNF827Q17R98 1081 aa18.06■□□□□ 0.48
RNF4-215ENST00000511843 MPRIPQ6WCQ1 1025 aa18.06■□□□□ 0.48
RNF4-215ENST00000511843 C5P01031 1676 aa18.06■□□□□ 0.48
RNF4-215ENST00000511843 IL13P35225 146 aa18.05■□□□□ 0.48
RNF4-215ENST00000511843 QSER1Q2KHR3 1735 aa18.05■□□□□ 0.48
RNF4-215ENST00000511843 PHKG2P15735 406 aa18.04■□□□□ 0.48
RNF4-215ENST00000511843 SULT6B1Q6IMI4 303 aa18.04■□□□□ 0.48
RNF4-215ENST00000511843 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
RNF4-215ENST00000511843 ZBTB7AO95365 584 aa18.03■□□□□ 0.48
RNF4-215ENST00000511843 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
RNF4-215ENST00000511843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.485e-8■□□□□ 9.7
RNF4-215ENST00000511843 COL3A1P02461 1466 aaPredicted RBP18.02■□□□□ 0.48
RNF4-215ENST00000511843 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
RNF4-215ENST00000511843 CCNL1Q9UK58 526 aaPredicted RBP18.02■□□□□ 0.48
RNF4-215ENST00000511843 SLC27A3Q5K4L6 730 aa18.01■□□□□ 0.47
RNF4-215ENST00000511843 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
RNF4-215ENST00000511843 PIGBQ92521 554 aa18.01■□□□□ 0.47
RNF4-215ENST00000511843 PALLDQ8WX93 1383 aa18.01■□□□□ 0.47
RNF4-215ENST00000511843 SCN11AQ9UI33 1791 aa18■□□□□ 0.47
RNF4-215ENST00000511843 HMOX1P09601 288 aa18■□□□□ 0.47
RNF4-215ENST00000511843 AKT1S1Q96B36 256 aa18■□□□□ 0.47
RNF4-215ENST00000511843 SPON1Q9HCB6 807 aa18■□□□□ 0.47
RNF4-215ENST00000511843 ATF5Q9Y2D1 282 aaPredicted RBP18■□□□□ 0.47
RNF4-215ENST00000511843 KDRP35968 1356 aa18■□□□□ 0.47
RNF4-215ENST00000511843 PLEKHO1Q53GL0 409 aaPredicted RBP17.99■□□□□ 0.47
RNF4-215ENST00000511843 KDM6AO15550 1401 aaPredicted RBP17.98■□□□□ 0.47
RNF4-215ENST00000511843 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
RNF4-215ENST00000511843 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
RNF4-215ENST00000511843 PLEKHG2Q9H7P9 1386 aa17.97■□□□□ 0.47
RNF4-215ENST00000511843 C4BP0C0L5 1744 aa17.97■□□□□ 0.47
RNF4-215ENST00000511843 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
RNF4-215ENST00000511843 ASAP1Q9ULH1 1129 aa17.96■□□□□ 0.47
RNF4-215ENST00000511843 PNPLA7Q6ZV29 1317 aa17.96■□□□□ 0.46
RNF4-215ENST00000511843 UBR3Q6ZT12 1888 aa17.95■□□□□ 0.46
RNF4-215ENST00000511843 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
RNF4-215ENST00000511843 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
RNF4-215ENST00000511843 U2SURPO15042 1029 aaKnown RBP17.94■□□□□ 0.46
RNF4-215ENST00000511843 C1orf141Q5JVX7 400 aa17.94■□□□□ 0.46
RNF4-215ENST00000511843 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
RNF4-215ENST00000511843 PTGER2P43116 358 aa17.93■□□□□ 0.46
RNF4-215ENST00000511843 SMARCC1Q92922 1105 aaPredicted RBP17.93■□□□□ 0.46
RNF4-215ENST00000511843 DCAF5Q96JK2 942 aa17.93■□□□□ 0.46
RNF4-215ENST00000511843 COL24A1Q17RW2 1714 aa17.92■□□□□ 0.46
RNF4-215ENST00000511843 MTFR1LQ9H019 292 aa17.92■□□□□ 0.46
RNF4-215ENST00000511843 ATG3Q9NT62 314 aa17.92■□□□□ 0.46
RNF4-215ENST00000511843 HSP90AB1P08238 724 aaKnown RBP17.91■□□□□ 0.46
RNF4-215ENST00000511843 SMIM5Q71RC9 77 aa17.91■□□□□ 0.46
RNF4-215ENST00000511843 COL5A3P25940 1745 aaPredicted RBP17.91■□□□□ 0.46
RNF4-215ENST00000511843 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
RNF4-215ENST00000511843 SIK1P57059 783 aa17.9■□□□□ 0.46
RNF4-215ENST00000511843 CABP4P57796 275 aa17.9■□□□□ 0.46
RNF4-215ENST00000511843 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 MSH5O43196 834 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 ITPK1Q13572 414 aa17.89■□□□□ 0.45
RNF4-215ENST00000511843 MTHFSDQ2M296 383 aaKnown RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms