RNA–Protein interactions for RNA: ENST00000511697.1

CALCOCO2-219, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-219ENST00000511697 UTRNP46939 3433 aa13.92□□□□□ -0.18
CALCOCO2-219ENST00000511697 FBLN1P23142 703 aa13.91□□□□□ -0.18
CALCOCO2-219ENST00000511697 IP6K1Q92551 441 aa13.91□□□□□ -0.18
CALCOCO2-219ENST00000511697 COG3Q96JB2 828 aa13.91□□□□□ -0.18
CALCOCO2-219ENST00000511697 DOT1LQ8TEK3 1739 aa13.9□□□□□ -0.18
CALCOCO2-219ENST00000511697 DDX54Q8TDD1 881 aaKnown RBP13.9□□□□□ -0.18
CALCOCO2-219ENST00000511697 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.19
CALCOCO2-219ENST00000511697 HOXC9P31274 260 aa13.89□□□□□ -0.19
CALCOCO2-219ENST00000511697 PTGER2P43116 358 aa13.89□□□□□ -0.19
CALCOCO2-219ENST00000511697 AMPHP49418 695 aa13.89□□□□□ -0.19
CALCOCO2-219ENST00000511697 SHANK3Q9BYB0 1731 aa13.89□□□□□ -0.19
CALCOCO2-219ENST00000511697 KIF20BQ96Q89 1820 aa13.88□□□□□ -0.19
CALCOCO2-219ENST00000511697 ANKRD36BQ8N2N9 1353 aa13.88□□□□□ -0.19
CALCOCO2-219ENST00000511697 USP47Q96K76 1375 aa13.87□□□□□ -0.19
CALCOCO2-219ENST00000511697 ZNF827Q17R98 1081 aa13.87□□□□□ -0.19
CALCOCO2-219ENST00000511697 SYTL4Q96C24 671 aaPredicted RBP13.87□□□□□ -0.19
CALCOCO2-219ENST00000511697 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
CALCOCO2-219ENST00000511697 MEGF6O75095 1541 aa13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 TUBGCP6Q96RT7 1819 aa13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 RRS1Q15050 365 aaKnown RBP13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 GGNBP2Q9H3C7 697 aa13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
CALCOCO2-219ENST00000511697 TMF1P82094 1093 aa13.85□□□□□ -0.19
CALCOCO2-219ENST00000511697 MKRN4PQ13434 485 aaPredicted RBP13.85□□□□□ -0.19
CALCOCO2-219ENST00000511697 RTL1A6NKG5 1358 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 KCNQ4P56696 695 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 USHBP1Q8N6Y0 703 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 LY75O60449 1722 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 QSER1Q2KHR3 1735 aa13.84□□□□□ -0.19
CALCOCO2-219ENST00000511697 FYB1O15117 783 aa13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 DSG3P32926 999 aa13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 PRIM1P49642 420 aaKnown RBP13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 TRIM26Q12899 539 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 ZCRB1Q8TBF4 217 aaKnown RBP13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 SGIP1Q9BQI5 828 aa13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 SYT17Q9BSW7 474 aa13.83□□□□□ -0.2
CALCOCO2-219ENST00000511697 NBPF6Q5VWK0 638 aa13.82□□□□□ -0.2
CALCOCO2-219ENST00000511697 NBPF4Q96M43 638 aa13.82□□□□□ -0.2
CALCOCO2-219ENST00000511697 ARXQ96QS3 562 aa13.82□□□□□ -0.2
CALCOCO2-219ENST00000511697 NSD2O96028 1365 aa13.82□□□□□ -0.2
CALCOCO2-219ENST00000511697 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
CALCOCO2-219ENST00000511697 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
CALCOCO2-219ENST00000511697 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
CALCOCO2-219ENST00000511697 AKT1S1Q96B36 256 aa13.81□□□□□ -0.2
CALCOCO2-219ENST00000511697 CHD4Q14839 1912 aa13.8□□□□□ -0.2
CALCOCO2-219ENST00000511697 KLHL34Q8N239 644 aa13.8□□□□□ -0.2
CALCOCO2-219ENST00000511697 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
CALCOCO2-219ENST00000511697 RAPGEF4Q8WZA2 1011 aa13.79□□□□□ -0.2
CALCOCO2-219ENST00000511697 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
CALCOCO2-219ENST00000511697 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
CALCOCO2-219ENST00000511697 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
CALCOCO2-219ENST00000511697 CDCA8Q53HL2 280 aa13.78□□□□□ -0.2
CALCOCO2-219ENST00000511697 CCNL1Q9UK58 526 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO2-219ENST00000511697 FLT4P35916 1363 aa13.78□□□□□ -0.2
CALCOCO2-219ENST00000511697 NSD3Q9BZ95 1437 aa13.78□□□□□ -0.2
CALCOCO2-219ENST00000511697 COL24A1Q17RW2 1714 aa13.78□□□□□ -0.2
CALCOCO2-219ENST00000511697 C5P01031 1676 aa13.77□□□□□ -0.21
CALCOCO2-219ENST00000511697 INSRP06213 1382 aa13.77□□□□□ -0.21
CALCOCO2-219ENST00000511697 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
CALCOCO2-219ENST00000511697 CGNL1Q0VF96 1302 aa13.76□□□□□ -0.21
CALCOCO2-219ENST00000511697 POLD1P28340 1107 aa13.76□□□□□ -0.21
CALCOCO2-219ENST00000511697 CARD14Q9BXL6 1004 aa13.76□□□□□ -0.21
CALCOCO2-219ENST00000511697 ITGB4P16144 1822 aa13.76□□□□□ -0.21
CALCOCO2-219ENST00000511697 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
CALCOCO2-219ENST00000511697 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 PCDH11XQ9BZA7 1347 aa13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 PCDH11YQ9BZA8 1340 aa13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 PPM1GO15355 546 aaPredicted RBP13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 MAP2P11137 1827 aaKnown RBP13.75□□□□□ -0.21
CALCOCO2-219ENST00000511697 TAF1LQ8IZX4 1826 aa13.74□□□□□ -0.21
CALCOCO2-219ENST00000511697 PKD1L3Q7Z443 1732 aa13.74□□□□□ -0.21
CALCOCO2-219ENST00000511697 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
CALCOCO2-219ENST00000511697 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
CALCOCO2-219ENST00000511697 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
CALCOCO2-219ENST00000511697 KIF24Q5T7B8 1368 aa13.73□□□□□ -0.21
CALCOCO2-219ENST00000511697 GPR162Q16538 588 aa13.73□□□□□ -0.21
CALCOCO2-219ENST00000511697 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
CALCOCO2-219ENST00000511697 POLR3GLQ9BT43 218 aa13.73□□□□□ -0.21
CALCOCO2-219ENST00000511697 SPDYE4A6NLX3 237 aa13.72□□□□□ -0.21
CALCOCO2-219ENST00000511697 PALLDQ8WX93 1383 aa13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 CYP27B1O15528 508 aa13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 NLGN2Q8NFZ4 835 aa13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
CALCOCO2-219ENST00000511697 C4BP0C0L5 1744 aa13.7□□□□□ -0.22
CALCOCO2-219ENST00000511697 TNNT2P45379 298 aaPredicted RBP13.68□□□□□ -0.22
CALCOCO2-219ENST00000511697 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
CALCOCO2-219ENST00000511697 EYA1Q99502 592 aa13.67□□□□□ -0.22
CALCOCO2-219ENST00000511697 TIMELESSQ9UNS1 1208 aa13.67□□□□□ -0.22
CALCOCO2-219ENST00000511697 UBR3Q6ZT12 1888 aa13.67□□□□□ -0.22
CALCOCO2-219ENST00000511697 WASHC2AQ641Q2 1341 aa13.66□□□□□ -0.22
CALCOCO2-219ENST00000511697 PIGBQ92521 554 aa13.66□□□□□ -0.22
CALCOCO2-219ENST00000511697 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
CALCOCO2-219ENST00000511697 PHF14O94880 888 aa13.65□□□□□ -0.22
CALCOCO2-219ENST00000511697 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms