RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 NBPF20Q3BBV1 942 aa10.55□□□□□ -0.72
GYPB-212ENST00000511198 COL17A1Q9UMD9 1497 aaPredicted RBP10.55□□□□□ -0.72
GYPB-212ENST00000511198 ESPNB1AK53 854 aa10.54□□□□□ -0.72
GYPB-212ENST00000511198 SCARF1Q14162 830 aa10.54□□□□□ -0.72
GYPB-212ENST00000511198 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
GYPB-212ENST00000511198 SOGA1O94964 1423 aa10.53□□□□□ -0.72
GYPB-212ENST00000511198 DHX9Q08211 1270 aaKnown RBP10.53□□□□□ -0.72
GYPB-212ENST00000511198 Q6ZVU0 165 aa10.53□□□□□ -0.72
GYPB-212ENST00000511198 PGPEP1Q9NXJ5 209 aa10.53□□□□□ -0.72
GYPB-212ENST00000511198 APBB1O00213 710 aa10.52□□□□□ -0.73
GYPB-212ENST00000511198 NR1H3Q13133 447 aa10.52□□□□□ -0.73
GYPB-212ENST00000511198 CBLBQ13191 982 aa10.52□□□□□ -0.73
GYPB-212ENST00000511198 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
GYPB-212ENST00000511198 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
GYPB-212ENST00000511198 GRIN2BQ13224 1484 aa10.51□□□□□ -0.73
GYPB-212ENST00000511198 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
GYPB-212ENST00000511198 TMPRSS4Q9NRS4 437 aa10.51□□□□□ -0.73
GYPB-212ENST00000511198 TBC1D2BQ9UPU7 963 aa10.51□□□□□ -0.73
GYPB-212ENST00000511198 PCDHB9Q9Y5E1 797 aa10.51□□□□□ -0.73
GYPB-212ENST00000511198 ERVH48-1M5A8F1 160 aa10.5□□□□□ -0.73
GYPB-212ENST00000511198 NFX1Q12986 1120 aaKnown RBP10.5□□□□□ -0.73
GYPB-212ENST00000511198 TOP2BQ02880 1626 aa10.5□□□□□ -0.73
GYPB-212ENST00000511198 GIGYF1O75420 1035 aaPredicted RBP10.49□□□□□ -0.73
GYPB-212ENST00000511198 RAB15P59190 212 aa10.49□□□□□ -0.73
GYPB-212ENST00000511198 TSEN34Q9BSV6 310 aaKnown RBP10.49□□□□□ -0.73
GYPB-212ENST00000511198 UPP2O95045 317 aa10.48□□□□□ -0.73
GYPB-212ENST00000511198 BMP2P12643 396 aa10.48□□□□□ -0.73
GYPB-212ENST00000511198 SEPT12Q8IYM1 358 aa10.48□□□□□ -0.73
GYPB-212ENST00000511198 ZNF784Q8NCA9 323 aaPredicted RBP10.48□□□□□ -0.73
GYPB-212ENST00000511198 SOBPA7XYQ1 873 aa10.47□□□□□ -0.73
GYPB-212ENST00000511198 TERTO14746 1132 aaKnown RBP10.47□□□□□ -0.73
GYPB-212ENST00000511198 LILRA1O75019 489 aa10.47□□□□□ -0.73
GYPB-212ENST00000511198 SHROOM2Q13796 1616 aa10.47□□□□□ -0.73
GYPB-212ENST00000511198 PPRC1Q5VV67 1664 aaKnown RBP10.47□□□□□ -0.73
GYPB-212ENST00000511198 IRF5Q13568 498 aa10.46□□□□□ -0.73
GYPB-212ENST00000511198 SOS2Q07890 1332 aaPredicted RBP10.46□□□□□ -0.73
GYPB-212ENST00000511198 WDR97A6NE52 1622 aa10.46□□□□□ -0.74
GYPB-212ENST00000511198 WFS1O76024 890 aa10.45□□□□□ -0.74
GYPB-212ENST00000511198 ADD1P35611 737 aaKnown RBP10.45□□□□□ -0.74
GYPB-212ENST00000511198 MCCD1P59942 119 aaPredicted RBP10.45□□□□□ -0.74
GYPB-212ENST00000511198 MCM6Q14566 821 aa10.45□□□□□ -0.74
GYPB-212ENST00000511198 LCE2CQ5TA81 110 aa10.45□□□□□ -0.74
GYPB-212ENST00000511198 SPINT1O43278 529 aa10.44□□□□□ -0.74
GYPB-212ENST00000511198 AGBL1Q96MI9 1066 aa10.44□□□□□ -0.74
GYPB-212ENST00000511198 NXF1Q9UBU9 619 aaKnown RBP10.44□□□□□ -0.74
GYPB-212ENST00000511198 KDF1Q8NAX2 398 aaPredicted RBP10.43□□□□□ -0.74
GYPB-212ENST00000511198 PRM3Q9NNZ6 103 aa10.43□□□□□ -0.74
GYPB-212ENST00000511198 DNMT3LQ9UJW3 386 aa10.43□□□□□ -0.74
GYPB-212ENST00000511198 ZNF330Q9Y3S2 320 aaPredicted RBP10.43□□□□□ -0.74
GYPB-212ENST00000511198 GDPD2Q9HCC8 539 aa10.42□□□□□ -0.74
GYPB-212ENST00000511198 ADCY10Q96PN6 1610 aa10.42□□□□□ -0.74
GYPB-212ENST00000511198 MAN1A2O60476 641 aa10.41□□□□□ -0.74
GYPB-212ENST00000511198 NUP160Q12769 1436 aa10.41□□□□□ -0.74
GYPB-212ENST00000511198 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
GYPB-212ENST00000511198 ADH1AP07327 375 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 RELBQ01201 579 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 RNF20Q5VTR2 975 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 CCDC125Q86Z20 511 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 NPAS3Q8IXF0 933 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 CYLDQ9NQC7 956 aa10.4□□□□□ -0.74
GYPB-212ENST00000511198 PRG4Q92954 1404 aaPredicted RBP10.4□□□□□ -0.75
GYPB-212ENST00000511198 TTLL8A6PVC2 850 aa10.39□□□□□ -0.75
GYPB-212ENST00000511198 VEGFBP49765 207 aa10.39□□□□□ -0.75
GYPB-212ENST00000511198 CEP126Q9P2H0 1117 aa10.39□□□□□ -0.75
GYPB-212ENST00000511198 PBRM1Q86U86 1689 aa10.38□□□□□ -0.75
GYPB-212ENST00000511198 PTPRMP28827 1452 aa10.38□□□□□ -0.75
GYPB-212ENST00000511198 GRIN2AQ12879 1464 aa10.38□□□□□ -0.75
GYPB-212ENST00000511198 ABL2P42684 1182 aa10.38□□□□□ -0.75
GYPB-212ENST00000511198 HSPA2P54652 639 aa10.38□□□□□ -0.75
GYPB-212ENST00000511198 ZNF395Q9H8N7 513 aaPredicted RBP10.38□□□□□ -0.75
GYPB-212ENST00000511198 H3BM21 787 aa10.37□□□□□ -0.75
GYPB-212ENST00000511198 PTGIRP43119 386 aa10.37□□□□□ -0.75
GYPB-212ENST00000511198 CTSOP43234 321 aaPredicted RBP10.37□□□□□ -0.75
GYPB-212ENST00000511198 ERVK-9P63128 1117 aa10.37□□□□□ -0.75
GYPB-212ENST00000511198 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
GYPB-212ENST00000511198 INSM2Q96T92 566 aaPredicted RBP10.37□□□□□ -0.75
GYPB-212ENST00000511198 TOP2AP11388 1531 aaKnown RBP10.37□□□□□ -0.75
GYPB-212ENST00000511198 VAC14Q08AM6 782 aa10.36□□□□□ -0.75
GYPB-212ENST00000511198 COG6Q9Y2V7 657 aa10.36□□□□□ -0.75
GYPB-212ENST00000511198 FGD5Q6ZNL6 1462 aa10.36□□□□□ -0.75
GYPB-212ENST00000511198 FIGNL2A6NMB9 653 aa10.35□□□□□ -0.75
GYPB-212ENST00000511198 SCTRP47872 440 aa10.35□□□□□ -0.75
GYPB-212ENST00000511198 EIF4G2P78344 907 aaKnown RBP eCLIP10.35□□□□□ -0.75
GYPB-212ENST00000511198 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.35□□□□□ -0.75
GYPB-212ENST00000511198 SLC16A10Q8TF71 515 aa10.35□□□□□ -0.75
GYPB-212ENST00000511198 CC2D2BQ6DHV5 1058 aa10.34□□□□□ -0.75
GYPB-212ENST00000511198 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
GYPB-212ENST00000511198 TRIM52Q96A61 297 aa10.34□□□□□ -0.75
GYPB-212ENST00000511198 PCDHB11Q9Y5F2 797 aa10.34□□□□□ -0.75
GYPB-212ENST00000511198 WIPF1O43516 503 aa10.33□□□□□ -0.76
GYPB-212ENST00000511198 RNF217Q8TC41 542 aa10.33□□□□□ -0.76
GYPB-212ENST00000511198 CCDC85AQ96PX6 553 aaPredicted RBP10.33□□□□□ -0.76
GYPB-212ENST00000511198 CCDC88BA6NC98 1476 aa10.33□□□□□ -0.76
GYPB-212ENST00000511198 GLI2P10070 1586 aa10.32□□□□□ -0.76
GYPB-212ENST00000511198 ATP5J2-PTCD1G3V325 749 aa10.32□□□□□ -0.76
GYPB-212ENST00000511198 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
GYPB-212ENST00000511198 FOXD4L5Q5VV16 416 aaPredicted RBP10.32□□□□□ -0.76
GYPB-212ENST00000511198 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
GYPB-212ENST00000511198 POLMQ9NP87 494 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms