RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 BRPF1P55201 1214 aaPredicted RBP20.7■□□□□ 0.9
CLDND1-222ENST00000510545 CADPS2Q86UW7 1296 aa20.7■□□□□ 0.9
CLDND1-222ENST00000510545 MRPL50Q8N5N7 158 aaKnown RBP20.7■□□□□ 0.9
CLDND1-222ENST00000510545 GAS2L2Q8NHY3 880 aa20.7■□□□□ 0.9
CLDND1-222ENST00000510545 PCDHB15Q9Y5E8 787 aa20.7■□□□□ 0.9
CLDND1-222ENST00000510545 XIRP1Q702N8 1843 aaKnown RBP20.7■□□□□ 0.9
CLDND1-222ENST00000510545 KIF16BQ96L93 1317 aa20.7■□□□□ 0.9
CLDND1-222ENST00000510545 KRT24Q2M2I5 525 aa20.69■□□□□ 0.9
CLDND1-222ENST00000510545 ALS2Q96Q42 1657 aa20.68■□□□□ 0.9
CLDND1-222ENST00000510545 MS4A1P11836 297 aa20.68■□□□□ 0.9
CLDND1-222ENST00000510545 MIS18AQ9NYP9 233 aa20.68■□□□□ 0.9
CLDND1-222ENST00000510545 MSH6P52701 1360 aa20.67■□□□□ 0.9
CLDND1-222ENST00000510545 AAMPQ13685 434 aa20.67■□□□□ 0.9
CLDND1-222ENST00000510545 RTF1Q92541 710 aaKnown RBP20.67■□□□□ 0.9
CLDND1-222ENST00000510545 IPO8O15397 1037 aaKnown RBP20.66■□□□□ 0.9
CLDND1-222ENST00000510545 TMEM57Q8N5G2 664 aa20.66■□□□□ 0.9
CLDND1-222ENST00000510545 LRRC59Q96AG4 307 aaKnown RBP20.66■□□□□ 0.9
CLDND1-222ENST00000510545 RGPD2P0DJD1 1756 aa20.66■□□□□ 0.9
CLDND1-222ENST00000510545 ZNF335Q9H4Z2 1342 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-222ENST00000510545 MED1Q15648 1581 aaPredicted RBP20.66■□□□□ 0.9
CLDND1-222ENST00000510545 ITPRIPQ8IWB1 547 aa20.65■□□□□ 0.9
CLDND1-222ENST00000510545 AXIN2Q9Y2T1 843 aa20.65■□□□□ 0.9
CLDND1-222ENST00000510545 GNAT3A8MTJ3 354 aa20.63■□□□□ 0.89
CLDND1-222ENST00000510545 HTATSF1O43719 755 aaKnown RBP20.63■□□□□ 0.89
CLDND1-222ENST00000510545 IL17REQ8NFR9 667 aa20.62■□□□□ 0.89
CLDND1-222ENST00000510545 KIAA0232Q92628 1395 aa20.62■□□□□ 0.89
CLDND1-222ENST00000510545 NPHP3Q7Z494 1330 aa20.62■□□□□ 0.89
CLDND1-222ENST00000510545 ZC3H6P61129 1189 aaKnown RBP20.62■□□□□ 0.89
CLDND1-222ENST00000510545 DDX19BQ9UMR2 479 aa20.62■□□□□ 0.89
CLDND1-222ENST00000510545 MAP3K5Q99683 1374 aa20.61■□□□□ 0.89
CLDND1-222ENST00000510545 LRRC37A3O60309 1634 aa20.61■□□□□ 0.89
CLDND1-222ENST00000510545 ANKRD24Q8TF21 1146 aa20.61■□□□□ 0.89
CLDND1-222ENST00000510545 ARHGAP45Q92619 1136 aa20.61■□□□□ 0.89
CLDND1-222ENST00000510545 PXDNQ92626 1479 aa20.61■□□□□ 0.89
CLDND1-222ENST00000510545 TSPYL4Q9UJ04 414 aa20.6■□□□□ 0.89
CLDND1-222ENST00000510545 BRINP3Q76B58 766 aa20.6■□□□□ 0.89
CLDND1-222ENST00000510545 PDE4AP27815 886 aa20.59■□□□□ 0.89
CLDND1-222ENST00000510545 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
CLDND1-222ENST00000510545 NCAPD2Q15021 1401 aa20.59■□□□□ 0.89
CLDND1-222ENST00000510545 TNS3Q68CZ2 1445 aa20.58■□□□□ 0.89
CLDND1-222ENST00000510545 ZBTB40Q9NUA8 1239 aa20.58■□□□□ 0.89
CLDND1-222ENST00000510545 RGPD5Q99666 1765 aa20.58■□□□□ 0.88
CLDND1-222ENST00000510545 RGS3P49796 1198 aa20.57■□□□□ 0.88
CLDND1-222ENST00000510545 BACH2Q9BYV9 841 aa20.57■□□□□ 0.88
CLDND1-222ENST00000510545 ABCC4O15439 1325 aa20.57■□□□□ 0.88
CLDND1-222ENST00000510545 SPATA31A3Q5VYP0 1347 aa20.57■□□□□ 0.88
CLDND1-222ENST00000510545 ERBB3P21860 1342 aa20.55■□□□□ 0.88
CLDND1-222ENST00000510545 RWDD1Q9H446 243 aaPredicted RBP20.54■□□□□ 0.88
CLDND1-222ENST00000510545 CAMTA1Q9Y6Y1 1673 aa20.54■□□□□ 0.88
CLDND1-222ENST00000510545 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
CLDND1-222ENST00000510545 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-222ENST00000510545 LGR6Q9HBX8 967 aa20.53■□□□□ 0.88
CLDND1-222ENST00000510545 CEMIPQ8WUJ3 1361 aa20.53■□□□□ 0.88
CLDND1-222ENST00000510545 HAP1P54257 671 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-222ENST00000510545 TAF7Q15545 349 aaPredicted RBP20.53■□□□□ 0.88
CLDND1-222ENST00000510545 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.88
CLDND1-222ENST00000510545 RGS12O14924 1447 aa20.52■□□□□ 0.88
CLDND1-222ENST00000510545 COL18A1P39060 1754 aa20.51■□□□□ 0.87
CLDND1-222ENST00000510545 ZNF530Q6P9A1 599 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-222ENST00000510545 CRYBG1Q9Y4K1 1723 aa20.51■□□□□ 0.87
CLDND1-222ENST00000510545 HDAC1Q13547 482 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-222ENST00000510545 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
CLDND1-222ENST00000510545 CHRNA2Q15822 529 aa20.5■□□□□ 0.87
CLDND1-222ENST00000510545 LMO7Q8WWI1 1683 aa20.5■□□□□ 0.87
CLDND1-222ENST00000510545 SLC4A2P04920 1241 aa20.5■□□□□ 0.87
CLDND1-222ENST00000510545 PDZRN3Q9UPQ7 1066 aa20.5■□□□□ 0.87
CLDND1-222ENST00000510545 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
CLDND1-222ENST00000510545 AMOTQ4VCS5 1084 aa20.48■□□□□ 0.87
CLDND1-222ENST00000510545 BABAM1Q9NWV8 329 aa20.48■□□□□ 0.87
CLDND1-222ENST00000510545 SOS2Q07890 1332 aaPredicted RBP20.48■□□□□ 0.87
CLDND1-222ENST00000510545 MSH5O43196 834 aa20.48■□□□□ 0.87
CLDND1-222ENST00000510545 MPRIPQ6WCQ1 1025 aa20.48■□□□□ 0.87
CLDND1-222ENST00000510545 G2E3Q7L622 706 aa20.48■□□□□ 0.87
CLDND1-222ENST00000510545 C1orf115Q9H7X2 142 aa20.47■□□□□ 0.87
CLDND1-222ENST00000510545 C8orf34Q49A92 452 aa20.46■□□□□ 0.87
CLDND1-222ENST00000510545 NLRP2Q9NX02 1062 aa20.46■□□□□ 0.87
CLDND1-222ENST00000510545 PTPRCP08575 1304 aa20.45■□□□□ 0.86
CLDND1-222ENST00000510545 INTS3Q68E01 1043 aaKnown RBP20.45■□□□□ 0.86
CLDND1-222ENST00000510545 CPDO75976 1380 aa20.45■□□□□ 0.86
CLDND1-222ENST00000510545 FAM208AQ9UK61 1670 aaKnown RBP20.44■□□□□ 0.86
CLDND1-222ENST00000510545 RNMTO43148 476 aaKnown RBP20.44■□□□□ 0.86
CLDND1-222ENST00000510545 KCNQ3O43525 872 aa20.44■□□□□ 0.86
CLDND1-222ENST00000510545 FAM161AQ3B820 660 aa20.44■□□□□ 0.86
CLDND1-222ENST00000510545 SMC5Q8IY18 1101 aa20.44■□□□□ 0.86
CLDND1-222ENST00000510545 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
CLDND1-222ENST00000510545 C1orf141Q5JVX7 400 aa20.43■□□□□ 0.86
CLDND1-222ENST00000510545 ANP32EQ9BTT0 268 aa20.43■□□□□ 0.86
CLDND1-222ENST00000510545 SIRT2Q8IXJ6 389 aa20.42■□□□□ 0.86
CLDND1-222ENST00000510545 CHMP4BQ9H444 224 aaKnown RBP20.42■□□□□ 0.86
CLDND1-222ENST00000510545 CSB-PGBD3P0DP91 1061 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 EIF4A1P60842 406 aaKnown RBP20.41■□□□□ 0.86
CLDND1-222ENST00000510545 CCDC30Q5VVM6 783 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 KDM3BQ7LBC6 1761 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 MEGF6O75095 1541 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 ABCC6O95255 1503 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 TEFQ10587 303 aa20.41■□□□□ 0.86
CLDND1-222ENST00000510545 VIRMAQ69YN4 1812 aaKnown RBP20.4■□□□□ 0.86
CLDND1-222ENST00000510545 F6X3S4 739 aa20.4■□□□□ 0.86
CLDND1-222ENST00000510545 RAPGEF4Q8WZA2 1011 aa20.4■□□□□ 0.86
CLDND1-222ENST00000510545 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms