RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CCT4P50991 539 aaKnown RBP17.95■□□□□ 0.46
USP38-202ENST00000510377 CWC27Q6UX04 472 aaKnown RBP17.95■□□□□ 0.46
USP38-202ENST00000510377 IFIT2P09913 472 aaKnown RBP17.94■□□□□ 0.46
USP38-202ENST00000510377 USP26Q9BXU7 913 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 PDCL3Q9H2J4 239 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 WDR33Q9C0J8 1336 aaKnown RBP17.94■□□□□ 0.46
USP38-202ENST00000510377 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
USP38-202ENST00000510377 DCTPP1Q9H773 170 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 ANKRD44Q8N8A2 993 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 BICD2Q8TD16 824 aa17.94■□□□□ 0.46
USP38-202ENST00000510377 KDM5AP29375 1690 aaKnown RBP17.94■□□□□ 0.46
USP38-202ENST00000510377 GSPT1P15170 499 aaKnown RBP17.93■□□□□ 0.46
USP38-202ENST00000510377 TTC37Q6PGP7 1564 aa17.93■□□□□ 0.46
USP38-202ENST00000510377 CCDC61Q9Y6R9 512 aa17.93■□□□□ 0.46
USP38-202ENST00000510377 CCDC30Q5VVM6 783 aa17.93■□□□□ 0.46
USP38-202ENST00000510377 FERMT3Q86UX7 667 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 MAP7D2Q96T17 732 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 TEFQ10587 303 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 CROCC2H7BZ55 1655 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 NLRP6P59044 892 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 ADCY10Q96PN6 1610 aa17.92■□□□□ 0.46
USP38-202ENST00000510377 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 RUFY2Q8WXA3 655 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 H3BQV1 296 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 IFFO2Q5TF58 517 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 PDE1AP54750 535 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 CEP85Q6P2H3 762 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 LRSAM1Q6UWE0 723 aa17.91■□□□□ 0.46
USP38-202ENST00000510377 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
USP38-202ENST00000510377 LRRFIP2Q9Y608 721 aaKnown RBP17.91■□□□□ 0.46
USP38-202ENST00000510377 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
USP38-202ENST00000510377 THEMISQ8N1K5 641 aaPredicted RBP17.9■□□□□ 0.46
USP38-202ENST00000510377 CNTROBQ8N137 903 aa17.9■□□□□ 0.46
USP38-202ENST00000510377 CSB-PGBD3P0DP91 1061 aa17.9■□□□□ 0.46
USP38-202ENST00000510377 AIMP1Q12904 312 aaKnown RBP17.9■□□□□ 0.46
USP38-202ENST00000510377 OFD1O75665 1012 aa17.89■□□□□ 0.45
USP38-202ENST00000510377 HCLS1P14317 486 aaPredicted RBP17.89■□□□□ 0.45
USP38-202ENST00000510377 STK3Q13188 491 aa17.89■□□□□ 0.45
USP38-202ENST00000510377 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
USP38-202ENST00000510377 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
USP38-202ENST00000510377 ZNF518AQ6AHZ1 1483 aa17.89■□□□□ 0.45
USP38-202ENST00000510377 LMBRD1Q9NUN5 540 aa17.88■□□□□ 0.45
USP38-202ENST00000510377 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
USP38-202ENST00000510377 CEBPZQ03701 1054 aaKnown RBP17.88■□□□□ 0.45
USP38-202ENST00000510377 SPG7Q9UQ90 795 aa17.88■□□□□ 0.45
USP38-202ENST00000510377 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 CAMK4Q16566 473 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 CLASRPQ8N2M8 674 aaKnown RBP17.87■□□□□ 0.45
USP38-202ENST00000510377 JAKMIP1Q96N16 626 aaKnown RBP17.87■□□□□ 0.45
USP38-202ENST00000510377 ZKSCAN5Q9Y2L8 839 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 BECN2A8MW95 431 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 TRIM5Q9C035 493 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 TTC12Q9H892 705 aaPredicted RBP17.87■□□□□ 0.45
USP38-202ENST00000510377 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 FAM177BA6PVY3 158 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 WASLO00401 505 aaPredicted RBP17.87■□□□□ 0.45
USP38-202ENST00000510377 FOXO3O43524 673 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 CASTP20810 708 aaKnown RBP17.87■□□□□ 0.45
USP38-202ENST00000510377 PPIP5K1Q6PFW1 1433 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 SIRT2Q8IXJ6 389 aa17.87■□□□□ 0.45
USP38-202ENST00000510377 SASS6Q6UVJ0 657 aa17.86■□□□□ 0.45
USP38-202ENST00000510377 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
USP38-202ENST00000510377 G2E3Q7L622 706 aa17.86■□□□□ 0.45
USP38-202ENST00000510377 TMEM63CQ9P1W3 806 aa17.85■□□□□ 0.45
USP38-202ENST00000510377 ESYT1Q9BSJ8 1104 aa17.85■□□□□ 0.45
USP38-202ENST00000510377 HTATSF1O43719 755 aaKnown RBP17.84■□□□□ 0.45
USP38-202ENST00000510377 ADCY5O95622 1261 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 CBX1P83916 185 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 USP48Q86UV5 1035 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 SRCIN1Q9C0H9 1055 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 ZNF330Q9Y3S2 320 aaPredicted RBP17.84■□□□□ 0.45
USP38-202ENST00000510377 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 FLIIQ13045 1269 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 GIMAP6Q6P9H5 292 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 RBM33Q96EV2 1170 aaKnown RBP17.84■□□□□ 0.45
USP38-202ENST00000510377 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
USP38-202ENST00000510377 SIL1Q9H173 461 aa17.84■□□□□ 0.45
USP38-202ENST00000510377 NRDCO43847 1150 aa17.83■□□□□ 0.45
USP38-202ENST00000510377 G3BP1Q13283 466 aaKnown RBP eCLIP17.83■□□□□ 0.45
USP38-202ENST00000510377 MTERF4Q7Z6M4 381 aaKnown RBP17.83■□□□□ 0.45
USP38-202ENST00000510377 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 LARP1BQ659C4 914 aaKnown RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 ZMYM3Q14202 1370 aa17.83■□□□□ 0.44
USP38-202ENST00000510377 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 ZNF771Q7L3S4 317 aaPredicted RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 PROSER2Q86WR7 435 aaPredicted RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 C17orf53Q8N3J3 647 aaPredicted RBP17.83■□□□□ 0.44
USP38-202ENST00000510377 FSD1Q9BTV5 496 aa17.83■□□□□ 0.44
USP38-202ENST00000510377 MSH6P52701 1360 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 USHBP1Q8N6Y0 703 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 CYP46A1Q9Y6A2 500 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 TRPM2O94759 1503 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 NPHP1O15259 732 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 PDRG1Q9NUG6 133 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 SBNO2Q9Y2G9 1366 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 ANXA1P04083 346 aa17.82■□□□□ 0.44
USP38-202ENST00000510377 EIF4A2Q14240 407 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms