RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	FSHR	P23945	695 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SCTR	P47872	440 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	FAM69C	Q0P6D2	419 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CCDC102B	Q68D86	513 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	B4GALNT3	Q6L9W6	998 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CDK15	Q96Q40	435 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	TMPRSS4	Q9NRS4	437 aa		5.55	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SFI1	A8K8P3	1242 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	DKK1	O94907	266 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	GRM5	P41594	1212 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SEC13	P55735	322 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SIX5	Q8N196	739 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	MRGPRX2	Q96LB1	330 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CYLD	Q9NQC7	956 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SLAIN2	Q9P270	581 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CCDC9	Q9Y3X0	531 aa	Known RBP	5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	IVNS1ABP	Q9Y6Y0	642 aa		5.54	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	WNT7A	O00755	349 aa		5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	SIAH2	O43255	324 aa		5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	LGR5	O75473	907 aa		5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CC2D2B	Q6DHV5	1058 aa		5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	PHLDB3	Q6NSJ2	640 aa		5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	CLP1	Q92989	425 aa	Known RBP	5.53	□□□□□ -1.52
CALCOCO2-216	ENST00000509784	ADH1C	P00326	375 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SSFA2	P28290	1259 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ERVK-9	P63128	1117 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	DHX9	Q08211	1270 aa	Known RBP	5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	FOXC1	Q12948	553 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SWI5	Q1ZZU3	235 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	IFFO2	Q5TF58	517 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TMCO4	Q5TGY1	634 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SPRYD7	Q5W111	196 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	MPND	Q8N594	471 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ZNF784	Q8NCA9	323 aa	Predicted RBP	5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	HINFP	Q9BQA5	517 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PLA2G2E	Q9NZK7	142 aa		5.52	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PRMT3	O60678	531 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	NR3C2	P08235	984 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ATP2B4	P23634	1241 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	NR5A1	Q13285	461 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ZNF697	Q5TEC3	545 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	CCDC116	Q8IYX3	515 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PRIMPOL	Q96LW4	560 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	OSBPL3	Q9H4L5	887 aa		5.51	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	STAU1	O95793	577 aa	Known RBP	5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ALDH1A1	P00352	501 aa		5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SCNN1A	P37088	669 aa		5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	MYT1	Q01538	1121 aa		5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TSEN2	Q8NCE0	465 aa	Known RBP	5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TRIM52	Q96A61	297 aa		5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ZNF358	Q9NW07	568 aa		5.5	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	LILRA1	O75019	489 aa		5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ARID4A	P29374	1257 aa	Predicted RBP	5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ZNF598	Q86UK7	904 aa	Known RBP	5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	CCER1	Q8TC90	406 aa	Predicted RBP	5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PRKD2	Q9BZL6	878 aa		5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PGPEP1	Q9NXJ5	209 aa		5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	GNE	Q9Y223	722 aa	Known RBP	5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	WASF2	Q9Y6W5	498 aa		5.49	□□□□□ -1.53
CALCOCO2-216	ENST00000509784		A0A0G2JS52	829 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TMEM229A	B2RXF0	380 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ADD1	P35611	737 aa	Known RBP	5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SCNN1D	P51172	638 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	MFAP1	P55081	439 aa	Known RBP	5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	GDF10	P55107	478 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	NNT	Q13423	1086 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TXNDC2	Q86VQ3	553 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	PKD2L1	Q9P0L9	805 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	CXXC1	Q9P0U4	656 aa	Predicted RBP	5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	SERTAD1	Q9UHV2	236 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	EMILIN1	Q9Y6C2	1016 aa		5.48	□□□□□ -1.53
CALCOCO2-216	ENST00000509784		M0R2N6	131 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	OCLN	Q16625	522 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	CYP2U1	Q7Z449	544 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TNS4	Q8IZW8	715 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	GAS2L2	Q8NHY3	880 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	ETNK1	Q9HBU6	452 aa		5.47	□□□□□ -1.53
CALCOCO2-216	ENST00000509784	TTC24	A2A3L6	582 aa	Predicted RBP	5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	BACH1	O14867	736 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	GNRH1	P01148	92 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	INHA	P05111	366 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SERPINB4	P48594	390 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CBLB	Q13191	982 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SND1	Q7KZF4	910 aa	Known RBP eCLIP	5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	SNIP1	Q8TAD8	396 aa	Known RBP	5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	MKNK1	Q9BUB5	465 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ARHGEF10L	Q9HCE6	1279 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	RAB6B	Q9NRW1	208 aa		5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		V9GY48	417 aa	Predicted RBP	5.46	□□□□□ -1.54
CALCOCO2-216	ENST00000509784		J3QL48	77 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TNFRSF10A	O00220	468 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	WEE1	P30291	646 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	ESCO1	Q5FWF5	840 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	TAS1R3	Q7RTX0	852 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	CYP4X1	Q8N118	509 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	C1orf216	Q8TAB5	229 aa		5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	PURB	Q96QR8	312 aa	Known RBP	5.45	□□□□□ -1.54
CALCOCO2-216	ENST00000509784	MTMR7	Q9Y216	660 aa		5.45	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms