RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 SBF2Q86WG5 1849 aa20.48■□□□□ 0.87
TRIO-211ENST00000508343 PLSCR1O15162 318 aa20.48■□□□□ 0.87
TRIO-211ENST00000508343 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
TRIO-211ENST00000508343 KCNQ2O43526 872 aa20.46■□□□□ 0.87
TRIO-211ENST00000508343 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
TRIO-211ENST00000508343 MTHFSP49914 203 aa20.44■□□□□ 0.86
TRIO-211ENST00000508343 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
TRIO-211ENST00000508343 ZEB1P37275 1124 aaPredicted RBP20.42■□□□□ 0.86
TRIO-211ENST00000508343 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
TRIO-211ENST00000508343 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRIO-211ENST00000508343 SPG7Q9UQ90 795 aa20.41■□□□□ 0.86
TRIO-211ENST00000508343 PCDH11XQ9BZA7 1347 aa20.41■□□□□ 0.86
TRIO-211ENST00000508343 PCDH11YQ9BZA8 1340 aa20.41■□□□□ 0.86
TRIO-211ENST00000508343 KAT6BQ8WYB5 2073 aa20.41■□□□□ 0.86
TRIO-211ENST00000508343 IL13P35225 146 aa20.4■□□□□ 0.86
TRIO-211ENST00000508343 CYP27B1O15528 508 aa20.39■□□□□ 0.85
TRIO-211ENST00000508343 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
TRIO-211ENST00000508343 NBPF14Q5TI25 921 aa20.39■□□□□ 0.85
TRIO-211ENST00000508343 SHANK3Q9BYB0 1731 aa20.39■□□□□ 0.85
TRIO-211ENST00000508343 NHSQ6T4R5 1651 aa20.38■□□□□ 0.85
TRIO-211ENST00000508343 PROM2Q8N271 834 aa20.38■□□□□ 0.85
TRIO-211ENST00000508343 SYTL4Q96C24 671 aaPredicted RBP20.37■□□□□ 0.85
TRIO-211ENST00000508343 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
TRIO-211ENST00000508343 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
TRIO-211ENST00000508343 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
TRIO-211ENST00000508343 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
TRIO-211ENST00000508343 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
TRIO-211ENST00000508343 RREB1Q92766 1687 aa20.35■□□□□ 0.85
TRIO-211ENST00000508343 PLEKHG2Q9H7P9 1386 aa20.35■□□□□ 0.85
TRIO-211ENST00000508343 NKX1-1Q15270 411 aaPredicted RBP20.35■□□□□ 0.85
TRIO-211ENST00000508343 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
TRIO-211ENST00000508343 DIAPH1O60610 1272 aaKnown RBP20.34■□□□□ 0.85
TRIO-211ENST00000508343 AEBP1Q8IUX7 1158 aa20.34■□□□□ 0.85
TRIO-211ENST00000508343 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.85
TRIO-211ENST00000508343 PLEKHO1Q53GL0 409 aaPredicted RBP20.33■□□□□ 0.85
TRIO-211ENST00000508343 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
TRIO-211ENST00000508343 PHKG2P15735 406 aa20.32■□□□□ 0.84
TRIO-211ENST00000508343 AMOTQ4VCS5 1084 aa20.32■□□□□ 0.84
TRIO-211ENST00000508343 NUP188Q5SRE5 1749 aa20.32■□□□□ 0.84
TRIO-211ENST00000508343 BTAF1O14981 1849 aa20.32■□□□□ 0.84
TRIO-211ENST00000508343 KDRP35968 1356 aa20.31■□□□□ 0.84
TRIO-211ENST00000508343 PPP2R1AP30153 589 aa20.3■□□□□ 0.84
TRIO-211ENST00000508343 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
TRIO-211ENST00000508343 MPRIPQ6WCQ1 1025 aa20.29■□□□□ 0.84
TRIO-211ENST00000508343 SRCAPQ6ZRS2 3230 aa20.29■□□□□ 0.84
TRIO-211ENST00000508343 DDX10Q13206 875 aaKnown RBP20.28■□□□□ 0.84
TRIO-211ENST00000508343 SLC27A3Q5K4L6 730 aa20.28■□□□□ 0.84
TRIO-211ENST00000508343 CFAP53Q96M91 514 aa20.28■□□□□ 0.84
TRIO-211ENST00000508343 HMOX1P09601 288 aa20.27■□□□□ 0.84
TRIO-211ENST00000508343 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
TRIO-211ENST00000508343 ANO8Q9HCE9 1232 aaPredicted RBP20.27■□□□□ 0.84
TRIO-211ENST00000508343 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
TRIO-211ENST00000508343 LRRC4BQ9NT99 713 aa20.26■□□□□ 0.83
TRIO-211ENST00000508343 STK32BQ9NY57 414 aa20.26■□□□□ 0.83
TRIO-211ENST00000508343 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
TRIO-211ENST00000508343 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
TRIO-211ENST00000508343 PIGBQ92521 554 aa20.25■□□□□ 0.83
TRIO-211ENST00000508343 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
TRIO-211ENST00000508343 C1orf141Q5JVX7 400 aa20.24■□□□□ 0.83
TRIO-211ENST00000508343 DCAF5Q96JK2 942 aa20.24■□□□□ 0.83
TRIO-211ENST00000508343 SMARCC1Q92922 1105 aaPredicted RBP20.23■□□□□ 0.83
TRIO-211ENST00000508343 TMOD3Q9NYL9 352 aa20.23■□□□□ 0.83
TRIO-211ENST00000508343 ERVV-2B6SEH9 535 aa20.22■□□□□ 0.83
TRIO-211ENST00000508343 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
TRIO-211ENST00000508343 TOGARAM1Q9Y4F4 1720 aa20.22■□□□□ 0.83
TRIO-211ENST00000508343 CCNL1Q9UK58 526 aaPredicted RBP20.21■□□□□ 0.83
TRIO-211ENST00000508343 KCNQ4P56696 695 aa20.2■□□□□ 0.82
TRIO-211ENST00000508343 ITGB4P16144 1822 aa20.2■□□□□ 0.82
TRIO-211ENST00000508343 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
TRIO-211ENST00000508343 RALBP1Q15311 655 aa20.19■□□□□ 0.82
TRIO-211ENST00000508343 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
TRIO-211ENST00000508343 HMGB2P26583 209 aaKnown RBP20.18■□□□□ 0.82
TRIO-211ENST00000508343 MTHFSDQ2M296 383 aaKnown RBP20.18■□□□□ 0.82
TRIO-211ENST00000508343 AKT1S1Q96B36 256 aa20.18■□□□□ 0.82
TRIO-211ENST00000508343 LY75O60449 1722 aa20.18■□□□□ 0.82
TRIO-211ENST00000508343 CABP4P57796 275 aa20.17■□□□□ 0.82
TRIO-211ENST00000508343 ZNF827Q17R98 1081 aa20.17■□□□□ 0.82
TRIO-211ENST00000508343 ASAP1Q9ULH1 1129 aa20.17■□□□□ 0.82
TRIO-211ENST00000508343 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
TRIO-211ENST00000508343 PAPPAQ13219 1627 aa20.16■□□□□ 0.82
TRIO-211ENST00000508343 U2AF1L5P0DN76 240 aaPredicted RBP20.15■□□□□ 0.82
TRIO-211ENST00000508343 U2AF1Q01081 240 aaKnown RBP eCLIP20.15■□□□□ 0.82
TRIO-211ENST00000508343 PDGFDQ9GZP0 370 aaPredicted RBP20.15■□□□□ 0.82
TRIO-211ENST00000508343 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
TRIO-211ENST00000508343 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
TRIO-211ENST00000508343 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
TRIO-211ENST00000508343 SPON1Q9HCB6 807 aa20.14■□□□□ 0.81
TRIO-211ENST00000508343 LRP5O75197 1615 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 FCHSD2O94868 740 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 SIK1P57059 783 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 TFCP2L1Q9NZI6 479 aa20.13■□□□□ 0.81
TRIO-211ENST00000508343 GAS2L2Q8NHY3 880 aa20.12■□□□□ 0.81
TRIO-211ENST00000508343 RNMTO43148 476 aaKnown RBP20.11■□□□□ 0.81
TRIO-211ENST00000508343 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
TRIO-211ENST00000508343 ZBTB7AO95365 584 aa20.1■□□□□ 0.81
TRIO-211ENST00000508343 CASZ1Q86V15 1759 aa20.09■□□□□ 0.81
TRIO-211ENST00000508343 ZNF316A6NFI3 1004 aaPredicted RBP20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms