RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 RGPD3A6NKT7 1758 aaPredicted RBP9.17□□□□□ -0.94
HMGN1P16-201ENST00000508308 RGPD4Q7Z3J3 1758 aa9.17□□□□□ -0.94
HMGN1P16-201ENST00000508308 ABCC6O95255 1503 aa9.16□□□□□ -0.94
HMGN1P16-201ENST00000508308 PLSCR1O15162 318 aa9.16□□□□□ -0.94
HMGN1P16-201ENST00000508308 BCL11BQ9C0K0 894 aaPredicted RBP9.16□□□□□ -0.94
HMGN1P16-201ENST00000508308 LTN1O94822 1766 aa9.16□□□□□ -0.94
HMGN1P16-201ENST00000508308 A0A1W2PP64 1363 aa9.15□□□□□ -0.94
HMGN1P16-201ENST00000508308 ASTLQ6HA08 431 aaPredicted RBP9.15□□□□□ -0.94
HMGN1P16-201ENST00000508308 TMC1Q8TDI8 760 aa9.15□□□□□ -0.94
HMGN1P16-201ENST00000508308 CDCA7Q9BWT1 371 aaPredicted RBP9.15□□□□□ -0.94
HMGN1P16-201ENST00000508308 ANO8Q9HCE9 1232 aaPredicted RBP9.15□□□□□ -0.94
HMGN1P16-201ENST00000508308 EDC4Q6P2E9 1401 aaKnown RBP9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 TONSLQ96HA7 1378 aa9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 ERBB3P21860 1342 aa9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 ST20-MTHFSA0A0A6YYL1 179 aa9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 C11orf95C9JLR9 678 aaPredicted RBP9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 PDGFDQ9GZP0 370 aaPredicted RBP9.14□□□□□ -0.95
HMGN1P16-201ENST00000508308 CCDC7Q96M83 1385 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 KCNQ2O43526 872 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 CSB-PGBD3P0DP91 1061 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 NBPF14Q5TI25 921 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 CASZ1Q86V15 1759 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 TNS2Q63HR2 1409 aa9.13□□□□□ -0.95
HMGN1P16-201ENST00000508308 UTRNP46939 3433 aa9.12□□□□□ -0.95
HMGN1P16-201ENST00000508308 EXOC5O00471 708 aa9.12□□□□□ -0.95
HMGN1P16-201ENST00000508308 FBLN1P23142 703 aa9.12□□□□□ -0.95
HMGN1P16-201ENST00000508308 HDGFL2Q7Z4V5 671 aaPredicted RBP9.12□□□□□ -0.95
HMGN1P16-201ENST00000508308 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
HMGN1P16-201ENST00000508308 NHSQ6T4R5 1651 aa9.11□□□□□ -0.95
HMGN1P16-201ENST00000508308 ANKRD24Q8TF21 1146 aa9.11□□□□□ -0.95
HMGN1P16-201ENST00000508308 NLRP2Q9NX02 1062 aa9.11□□□□□ -0.95
HMGN1P16-201ENST00000508308 MKRN4PQ13434 485 aaPredicted RBP9.1□□□□□ -0.95
HMGN1P16-201ENST00000508308 TXNRD1Q16881 649 aa9.1□□□□□ -0.95
HMGN1P16-201ENST00000508308 IP6K1Q92551 441 aa9.1□□□□□ -0.95
HMGN1P16-201ENST00000508308 RGPD2P0DJD1 1756 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 IL2RBP14784 551 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 ACSBG1Q96GR2 724 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 SPON1Q9HCB6 807 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 BTAF1O14981 1849 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 FAM208AQ9UK61 1670 aaKnown RBP9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 NINLQ9Y2I6 1382 aa9.09□□□□□ -0.95
HMGN1P16-201ENST00000508308 MAP3K19Q56UN5 1328 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 KAT6BQ8WYB5 2073 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 PTGER2P43116 358 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 TRIM26Q12899 539 aaPredicted RBP9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 PHF12Q96QT6 1004 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 PAPPAQ13219 1627 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
HMGN1P16-201ENST00000508308 FYB1O15117 783 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 HOXC9P31274 260 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 SLC15A2Q16348 729 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 LTV1Q96GA3 475 aaPredicted RBP9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 LRRC4BQ9NT99 713 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 ANKRD36BQ8N2N9 1353 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 USP47Q96K76 1375 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 MYOM1P52179 1685 aa9.07□□□□□ -0.96
HMGN1P16-201ENST00000508308 ZBTB7AO95365 584 aa9.06□□□□□ -0.96
HMGN1P16-201ENST00000508308 COG3Q96JB2 828 aa9.06□□□□□ -0.96
HMGN1P16-201ENST00000508308 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
HMGN1P16-201ENST00000508308 GOLGB1Q14789 3259 aaKnown RBP9.06□□□□□ -0.96
HMGN1P16-201ENST00000508308 MEGF6O75095 1541 aa9.05□□□□□ -0.96
HMGN1P16-201ENST00000508308 RRS1Q15050 365 aaKnown RBP9.05□□□□□ -0.96
HMGN1P16-201ENST00000508308 ZNF827Q17R98 1081 aa9.05□□□□□ -0.96
HMGN1P16-201ENST00000508308 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
HMGN1P16-201ENST00000508308 GGNBP2Q9H3C7 697 aa9.05□□□□□ -0.96
HMGN1P16-201ENST00000508308 NSD2O96028 1365 aa9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 NBPF6Q5VWK0 638 aa9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 DDX54Q8TDD1 881 aaKnown RBP9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 NBPF4Q96M43 638 aa9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 FOXD4L1Q9NU39 408 aa9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 PPP1R1BQ9UD71 204 aaPredicted RBP9.04□□□□□ -0.96
HMGN1P16-201ENST00000508308 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 AMPHP49418 695 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 TMF1P82094 1093 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 KIF20BQ96Q89 1820 aa9.03□□□□□ -0.96
HMGN1P16-201ENST00000508308 RTL1A6NKG5 1358 aa9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 KCNQ4P56696 695 aa9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 HSP90AB2PQ58FF8 381 aa9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 TUBGCP6Q96RT7 1819 aa9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 LY75O60449 1722 aa9.02□□□□□ -0.97
HMGN1P16-201ENST00000508308 COL24A1Q17RW2 1714 aa9.01□□□□□ -0.97
HMGN1P16-201ENST00000508308 QSER1Q2KHR3 1735 aa9.01□□□□□ -0.97
HMGN1P16-201ENST00000508308 ZCRB1Q8TBF4 217 aaKnown RBP9.01□□□□□ -0.97
HMGN1P16-201ENST00000508308 FHDC1Q9C0D6 1143 aaPredicted RBP9.01□□□□□ -0.97
HMGN1P16-201ENST00000508308 MTFR1LQ9H019 292 aa9.01□□□□□ -0.97
HMGN1P16-201ENST00000508308 INSRP06213 1382 aa9□□□□□ -0.97
HMGN1P16-201ENST00000508308 SYT17Q9BSW7 474 aa9□□□□□ -0.97
HMGN1P16-201ENST00000508308 PNPLA7Q6ZV29 1317 aa9□□□□□ -0.97
HMGN1P16-201ENST00000508308 NSD3Q9BZ95 1437 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 ST18O60284 1047 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 YY1P25490 414 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 SLC27A3Q5K4L6 730 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
HMGN1P16-201ENST00000508308 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms