RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
DDX41-208ENST00000507955 NECTIN2Q92692 538 aa18.24■□□□□ 0.51
DDX41-208ENST00000507955 PIK3C2AO00443 1686 aa18.24■□□□□ 0.51
DDX41-208ENST00000507955 UPF2Q9HAU5 1272 aaKnown RBP18.23■□□□□ 0.51
DDX41-208ENST00000507955 PIK3R4Q99570 1358 aa18.23■□□□□ 0.51
DDX41-208ENST00000507955 HOXC9P31274 260 aa18.23■□□□□ 0.51
DDX41-208ENST00000507955 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
DDX41-208ENST00000507955 SLC4A2P04920 1241 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 G2E3Q7L622 706 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
DDX41-208ENST00000507955 TSPYL4Q9UJ04 414 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 CRB1P82279 1406 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
DDX41-208ENST00000507955 BRPF3Q9ULD4 1205 aa18.22■□□□□ 0.51
DDX41-208ENST00000507955 F6X3S4 739 aa18.21■□□□□ 0.51
DDX41-208ENST00000507955 ANKLE2Q86XL3 938 aa18.21■□□□□ 0.51
DDX41-208ENST00000507955 XRN1Q8IZH2 1706 aaKnown RBP18.21■□□□□ 0.51
DDX41-208ENST00000507955 SETD1BQ9UPS6 1966 aaKnown RBP18.21■□□□□ 0.5
DDX41-208ENST00000507955 IGSF1Q8N6C5 1336 aa18.2■□□□□ 0.5
DDX41-208ENST00000507955 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
DDX41-208ENST00000507955 APBB1O00213 710 aa18.2■□□□□ 0.5
DDX41-208ENST00000507955 ESCO1Q5FWF5 840 aa18.2■□□□□ 0.5
DDX41-208ENST00000507955 PHF8Q9UPP1 1060 aa18.2■□□□□ 0.5
DDX41-208ENST00000507955 SLC4A10Q6U841 1118 aa18.19■□□□□ 0.5
DDX41-208ENST00000507955 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
DDX41-208ENST00000507955 C22orf23Q9BZE7 217 aa18.19■□□□□ 0.5
DDX41-208ENST00000507955 RGS12O14924 1447 aa18.18■□□□□ 0.5
DDX41-208ENST00000507955 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
DDX41-208ENST00000507955 MEIS3Q99687 375 aa18.18■□□□□ 0.5
DDX41-208ENST00000507955 KDRP35968 1356 aa18.17■□□□□ 0.5
DDX41-208ENST00000507955 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
DDX41-208ENST00000507955 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
DDX41-208ENST00000507955 MSH6P52701 1360 aa18.16■□□□□ 0.5
DDX41-208ENST00000507955 INTS3Q68E01 1043 aaKnown RBP18.16■□□□□ 0.5
DDX41-208ENST00000507955 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
DDX41-208ENST00000507955 GCC1Q96CN9 775 aa18.16■□□□□ 0.5
DDX41-208ENST00000507955 PSME1Q06323 249 aa18.15■□□□□ 0.5
DDX41-208ENST00000507955 BECN1Q14457 450 aa18.15■□□□□ 0.5
DDX41-208ENST00000507955 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
DDX41-208ENST00000507955 OTUD7AQ8TE49 926 aaPredicted RBP18.15■□□□□ 0.5
DDX41-208ENST00000507955 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
DDX41-208ENST00000507955 SMARCA5O60264 1052 aaPredicted RBP18.14■□□□□ 0.49
DDX41-208ENST00000507955 GAS2L2Q8NHY3 880 aa18.14■□□□□ 0.49
DDX41-208ENST00000507955 GNAT3A8MTJ3 354 aa18.13■□□□□ 0.49
DDX41-208ENST00000507955 LRRC59Q96AG4 307 aaKnown RBP18.13■□□□□ 0.49
DDX41-208ENST00000507955 ANKARQ7Z5J8 1434 aa18.13■□□□□ 0.49
DDX41-208ENST00000507955 NBPF6Q5VWK0 638 aa18.13■□□□□ 0.49
DDX41-208ENST00000507955 NBPF4Q96M43 638 aa18.13■□□□□ 0.49
DDX41-208ENST00000507955 CHMP4BQ9H444 224 aaKnown RBP18.13■□□□□ 0.49
DDX41-208ENST00000507955 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
DDX41-208ENST00000507955 CEP85Q6P2H3 762 aa18.11■□□□□ 0.49
DDX41-208ENST00000507955 ANTXR1Q9H6X2 564 aa18.11■□□□□ 0.49
DDX41-208ENST00000507955 BMP2KLQ5H9B9 411 aa18.1■□□□□ 0.49
DDX41-208ENST00000507955 NWD1Q149M9 1564 aa18.1■□□□□ 0.49
DDX41-208ENST00000507955 GSPT1P15170 499 aaKnown RBP18.1■□□□□ 0.49
DDX41-208ENST00000507955 DCTPP1Q9H773 170 aa18.1■□□□□ 0.49
DDX41-208ENST00000507955 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 RTL1A6NKG5 1358 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 ATP10DQ9P241 1426 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 TBC1D9Q6ZT07 1266 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
DDX41-208ENST00000507955 CHD2O14647 1828 aaKnown RBP18.08■□□□□ 0.49
DDX41-208ENST00000507955 PTPRCP08575 1304 aa18.08■□□□□ 0.49
DDX41-208ENST00000507955 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
DDX41-208ENST00000507955 FKBP5Q13451 457 aaPredicted RBP18.07■□□□□ 0.48
DDX41-208ENST00000507955 IP6K1Q92551 441 aa18.06■□□□□ 0.48
DDX41-208ENST00000507955 FLIIQ13045 1269 aa18.06■□□□□ 0.48
DDX41-208ENST00000507955 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
DDX41-208ENST00000507955 MAP3K5Q99683 1374 aa18.06■□□□□ 0.48
DDX41-208ENST00000507955 KCNQ3O43525 872 aa18.05■□□□□ 0.48
DDX41-208ENST00000507955 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
DDX41-208ENST00000507955 EIF2S2P20042 333 aaKnown RBP18.05■□□□□ 0.48
DDX41-208ENST00000507955 TAF7Q15545 349 aaPredicted RBP18.05■□□□□ 0.48
DDX41-208ENST00000507955 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
DDX41-208ENST00000507955 ANO8Q9HCE9 1232 aaPredicted RBP18.05■□□□□ 0.48
DDX41-208ENST00000507955 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
DDX41-208ENST00000507955 RPAP2Q8IXW5 612 aaPredicted RBP18.04■□□□□ 0.48
DDX41-208ENST00000507955 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 MPRIPQ6WCQ1 1025 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 LTN1O94822 1766 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 GCP02774 474 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 ANXA1P04083 346 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 EXOC6BQ9Y2D4 811 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 ADGRL3Q9HAR2 1447 aa18.03■□□□□ 0.48
DDX41-208ENST00000507955 CD2BP2O95400 341 aaKnown RBP18.02■□□□□ 0.48
DDX41-208ENST00000507955 KIF2CQ99661 725 aa18.02■□□□□ 0.48
DDX41-208ENST00000507955 CCDC30Q5VVM6 783 aa18.02■□□□□ 0.48
DDX41-208ENST00000507955 AXIN2Q9Y2T1 843 aa18.02■□□□□ 0.48
DDX41-208ENST00000507955 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.47
DDX41-208ENST00000507955 RBM25P49756 843 aaKnown RBP18.01■□□□□ 0.47
DDX41-208ENST00000507955 PROSER2Q86WR7 435 aaPredicted RBP18.01■□□□□ 0.47
DDX41-208ENST00000507955 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
DDX41-208ENST00000507955 NPHP4O75161 1426 aaPredicted RBP18.01■□□□□ 0.47
DDX41-208ENST00000507955 RGPD2P0DJD1 1756 aa18.01■□□□□ 0.47
DDX41-208ENST00000507955 PNMA6EA0A0J9YXQ4 647 aa18.01■□□□□ 0.47
DDX41-208ENST00000507955 TTC22Q5TAA0 569 aa18■□□□□ 0.47
DDX41-208ENST00000507955 HDGFL1Q5TGJ6 251 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 663 ms