RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 MEGF6O75095 1541 aa28.84■■■□□ 2.21
CLDND1-216ENST00000507944 CASZ1Q86V15 1759 aa28.84■■■□□ 2.21
CLDND1-216ENST00000507944 EIF4G2P78344 907 aaKnown RBP eCLIP28.84■■■□□ 2.21
CLDND1-216ENST00000507944 RAPGEF4Q8WZA2 1011 aa28.83■■■□□ 2.21
CLDND1-216ENST00000507944 CGNL1Q0VF96 1302 aa28.82■■■□□ 2.2
CLDND1-216ENST00000507944 ZBTB7AO95365 584 aa28.81■■■□□ 2.2
CLDND1-216ENST00000507944 HSPA5P11021 654 aaKnown RBP28.81■■■□□ 2.2
CLDND1-216ENST00000507944 PRIM1P49642 420 aaKnown RBP28.81■■■□□ 2.2
CLDND1-216ENST00000507944 SYTL4Q96C24 671 aaPredicted RBP28.81■■■□□ 2.2
CLDND1-216ENST00000507944 EMILIN1Q9Y6C2 1016 aa28.81■■■□□ 2.2
CLDND1-216ENST00000507944 TATP17735 454 aaPredicted RBP28.79■■■□□ 2.2
CLDND1-216ENST00000507944 LRRC4BQ9NT99 713 aa28.79■■■□□ 2.2
CLDND1-216ENST00000507944 SHANK3Q9BYB0 1731 aa28.79■■■□□ 2.2
CLDND1-216ENST00000507944 PPM1GO15355 546 aaPredicted RBP28.77■■■□□ 2.2
CLDND1-216ENST00000507944 ATF5Q9Y2D1 282 aaPredicted RBP28.77■■■□□ 2.2
CLDND1-216ENST00000507944 SLC27A3Q5K4L6 730 aa28.76■■■□□ 2.19
CLDND1-216ENST00000507944 MAP2P11137 1827 aaKnown RBP28.76■■■□□ 2.19
CLDND1-216ENST00000507944 DOT1LQ8TEK3 1739 aa28.74■■■□□ 2.19
CLDND1-216ENST00000507944 PAPPAQ13219 1627 aa28.73■■■□□ 2.19
CLDND1-216ENST00000507944 PTGER2P43116 358 aa28.73■■■□□ 2.19
CLDND1-216ENST00000507944 WASHC2AQ641Q2 1341 aa28.72■■■□□ 2.19
CLDND1-216ENST00000507944 ZNF827Q17R98 1081 aa28.72■■■□□ 2.19
CLDND1-216ENST00000507944 MTFR1LQ9H019 292 aa28.72■■■□□ 2.19
CLDND1-216ENST00000507944 NSD2O96028 1365 aa28.72■■■□□ 2.19
CLDND1-216ENST00000507944 PANK3Q9H999 370 aa28.7■■■□□ 2.18
CLDND1-216ENST00000507944 POLKQ9UBT6 870 aa28.7■■■□□ 2.18
CLDND1-216ENST00000507944 PCDH11XQ9BZA7 1347 aa28.69■■■□□ 2.18
CLDND1-216ENST00000507944 PCDH11YQ9BZA8 1340 aa28.69■■■□□ 2.18
CLDND1-216ENST00000507944 AKT1S1Q96B36 256 aa28.69■■■□□ 2.18
CLDND1-216ENST00000507944 KCNQ4P56696 695 aa28.68■■■□□ 2.18
CLDND1-216ENST00000507944 ANKRD26Q9UPS8 1709 aa28.67■■■□□ 2.18
CLDND1-216ENST00000507944 TNNT2P45379 298 aaPredicted RBP28.67■■■□□ 2.18
CLDND1-216ENST00000507944 CYP27B1O15528 508 aa28.66■■■□□ 2.18
CLDND1-216ENST00000507944 DCAF8L1A6NGE4 600 aa28.65■■■□□ 2.18
CLDND1-216ENST00000507944 EYA1Q99502 592 aa28.65■■■□□ 2.18
CLDND1-216ENST00000507944 LY75O60449 1722 aa28.64■■■□□ 2.18
CLDND1-216ENST00000507944 SGIP1Q9BQI5 828 aa28.64■■■□□ 2.18
CLDND1-216ENST00000507944 CCNL1Q9UK58 526 aaPredicted RBP28.64■■■□□ 2.18
CLDND1-216ENST00000507944 NCAPD2Q15021 1401 aa28.63■■■□□ 2.17
CLDND1-216ENST00000507944 TFCP2L1Q9NZI6 479 aa28.62■■■□□ 2.17
CLDND1-216ENST00000507944 SPG7Q9UQ90 795 aa28.61■■■□□ 2.17
CLDND1-216ENST00000507944 MPRIPQ6WCQ1 1025 aa28.6■■■□□ 2.17
CLDND1-216ENST00000507944 EIF4A2Q14240 407 aaKnown RBP28.59■■■□□ 2.17
CLDND1-216ENST00000507944 SLC16A10Q8TF71 515 aa28.59■■■□□ 2.17
CLDND1-216ENST00000507944 PKD1L3Q7Z443 1732 aa28.59■■■□□ 2.17
CLDND1-216ENST00000507944 PNPLA7Q6ZV29 1317 aa28.59■■■□□ 2.17
CLDND1-216ENST00000507944 ARXQ96QS3 562 aa28.58■■■□□ 2.17
CLDND1-216ENST00000507944 SYT17Q9BSW7 474 aa28.58■■■□□ 2.17
CLDND1-216ENST00000507944 FHDC1Q9C0D6 1143 aaPredicted RBP28.58■■■□□ 2.17
CLDND1-216ENST00000507944 QSER1Q2KHR3 1735 aa28.57■■■□□ 2.16
CLDND1-216ENST00000507944 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.57■■■□□ 2.16
CLDND1-216ENST00000507944 NKX1-1Q15270 411 aaPredicted RBP28.56■■■□□ 2.16
CLDND1-216ENST00000507944 ITGB4P16144 1822 aa28.55■■■□□ 2.16
CLDND1-216ENST00000507944 MORC1Q86VD1 984 aa28.54■■■□□ 2.16
CLDND1-216ENST00000507944 TUBGCP6Q96RT7 1819 aa28.54■■■□□ 2.16
CLDND1-216ENST00000507944 KNSTRNQ9Y448 316 aa28.53■■■□□ 2.16
CLDND1-216ENST00000507944 PALLDQ8WX93 1383 aa28.52■■■□□ 2.16
CLDND1-216ENST00000507944 SMARCC1Q92922 1105 aaPredicted RBP28.52■■■□□ 2.16
CLDND1-216ENST00000507944 TOGARAM1Q9Y4F4 1720 aa28.52■■■□□ 2.16
CLDND1-216ENST00000507944 YY1P25490 414 aa28.51■■■□□ 2.15
CLDND1-216ENST00000507944 HMGB2P26583 209 aaKnown RBP28.51■■■□□ 2.15
CLDND1-216ENST00000507944 PIGBQ92521 554 aa28.51■■■□□ 2.15
CLDND1-216ENST00000507944 POLD1P28340 1107 aa28.5■■■□□ 2.15
CLDND1-216ENST00000507944 IFNL2Q8IZJ0 200 aa28.5■■■□□ 2.15
CLDND1-216ENST00000507944 PHKG2P15735 406 aa28.49■■■□□ 2.15
CLDND1-216ENST00000507944 IGSF1Q8N6C5 1336 aa28.48■■■□□ 2.15
CLDND1-216ENST00000507944 MSH5O43196 834 aa28.48■■■□□ 2.15
CLDND1-216ENST00000507944 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
CLDND1-216ENST00000507944 KIF7Q2M1P5 1343 aa28.46■■■□□ 2.15
CLDND1-216ENST00000507944 C5P01031 1676 aa28.45■■■□□ 2.15
CLDND1-216ENST00000507944 TMOD3Q9NYL9 352 aa28.45■■■□□ 2.14
CLDND1-216ENST00000507944 COL24A1Q17RW2 1714 aa28.45■■■□□ 2.14
CLDND1-216ENST00000507944 MAP3K5Q99683 1374 aa28.45■■■□□ 2.14
CLDND1-216ENST00000507944 TAF1LQ8IZX4 1826 aa28.45■■■□□ 2.14
CLDND1-216ENST00000507944 PLEKHG2Q9H7P9 1386 aa28.44■■■□□ 2.14
CLDND1-216ENST00000507944 AMER1Q5JTC6 1135 aaPredicted RBP28.42■■■□□ 2.14
CLDND1-216ENST00000507944 PLEKHO1Q53GL0 409 aaPredicted RBP28.41■■■□□ 2.14
CLDND1-216ENST00000507944 KLHL34Q8N239 644 aa28.41■■■□□ 2.14
CLDND1-216ENST00000507944 FLAD1Q8NFF5 587 aa28.41■■■□□ 2.14
CLDND1-216ENST00000507944 ASAP1Q9ULH1 1129 aa28.4■■■□□ 2.14
CLDND1-216ENST00000507944 LOC102724428A0A0B4J2F2 783 aa28.39■■■□□ 2.14
CLDND1-216ENST00000507944 SIK1P57059 783 aa28.39■■■□□ 2.14
CLDND1-216ENST00000507944 AMOTQ4VCS5 1084 aa28.38■■■□□ 2.13
CLDND1-216ENST00000507944 AK7Q96M32 723 aa28.38■■■□□ 2.13
CLDND1-216ENST00000507944 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
CLDND1-216ENST00000507944 AEBP1Q8IUX7 1158 aa28.37■■■□□ 2.13
CLDND1-216ENST00000507944 C4BP0C0L5 1744 aa28.36■■■□□ 2.13
CLDND1-216ENST00000507944 MSL1Q68DK7 614 aa28.36■■■□□ 2.13
CLDND1-216ENST00000507944 DCAF5Q96JK2 942 aa28.36■■■□□ 2.13
CLDND1-216ENST00000507944 ATG3Q9NT62 314 aa28.36■■■□□ 2.13
CLDND1-216ENST00000507944 ERVV-2B6SEH9 535 aa28.35■■■□□ 2.13
CLDND1-216ENST00000507944 IL13P35225 146 aa28.35■■■□□ 2.13
CLDND1-216ENST00000507944 ZNF530Q6P9A1 599 aaPredicted RBP28.35■■■□□ 2.13
CLDND1-216ENST00000507944 PER1O15534 1290 aaPredicted RBP28.34■■■□□ 2.13
CLDND1-216ENST00000507944 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
CLDND1-216ENST00000507944 ATP6V1AP38606 617 aa28.33■■■□□ 2.13
CLDND1-216ENST00000507944 LINC00116Q8NCU8 138 aa28.33■■■□□ 2.13
CLDND1-216ENST00000507944 GPR162Q16538 588 aa28.32■■■□□ 2.12
CLDND1-216ENST00000507944 AMIGO3Q86WK7 504 aa28.32■■■□□ 2.12
CLDND1-216ENST00000507944 UTRNP46939 3433 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms