RNA–Protein interactions for RNA: ENST00000507909.1

SRPK1-209, Transcript of SRSF protein kinase 1, humanhuman

TSL 4

Gene SRPK1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-209ENST00000507909 RXRBP28702 533 aa12.99□□□□□ -0.33
SRPK1-209ENST00000507909 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
SRPK1-209ENST00000507909 FAM98CQ17RN3 349 aaKnown RBP12.99□□□□□ -0.33
SRPK1-209ENST00000507909 LRRC37A3O60309 1634 aa12.99□□□□□ -0.33
SRPK1-209ENST00000507909 NEFMP07197 916 aa12.98□□□□□ -0.33
SRPK1-209ENST00000507909 POTEAQ6S8J7 498 aa12.98□□□□□ -0.33
SRPK1-209ENST00000507909 FAM9BQ8IZU0 186 aa12.98□□□□□ -0.33
SRPK1-209ENST00000507909 TNS2Q63HR2 1409 aa12.97□□□□□ -0.33
SRPK1-209ENST00000507909 ONECUT3O60422 494 aaPredicted RBP12.97□□□□□ -0.33
SRPK1-209ENST00000507909 PLEKHF1Q96S99 279 aa12.97□□□□□ -0.33
SRPK1-209ENST00000507909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.97□□□□□ -0.335e-8■■□□□ 11.6
SRPK1-209ENST00000507909 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 MAPK8IP3Q9UPT6 1336 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 A0A0G2JS52 829 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 MYT1Q01538 1121 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 AMOTQ4VCS5 1084 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 PLEKHO1Q53GL0 409 aaPredicted RBP12.96□□□□□ -0.33
SRPK1-209ENST00000507909 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
SRPK1-209ENST00000507909 ZCRB1Q8TBF4 217 aaKnown RBP12.95□□□□□ -0.34
SRPK1-209ENST00000507909 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
SRPK1-209ENST00000507909 PCDH11XQ9BZA7 1347 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 PCDH11YQ9BZA8 1340 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 EXOC5O00471 708 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 DDB1Q16531 1140 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 PHACTR3Q96KR7 559 aa12.94□□□□□ -0.34
SRPK1-209ENST00000507909 BRWD3Q6RI45 1802 aa12.93□□□□□ -0.34
SRPK1-209ENST00000507909 RGS12O14924 1447 aa12.93□□□□□ -0.34
SRPK1-209ENST00000507909 DLG5Q8TDM6 1919 aa12.92□□□□□ -0.34
SRPK1-209ENST00000507909 MTHFSDQ2M296 383 aaKnown RBP12.92□□□□□ -0.34
SRPK1-209ENST00000507909 ZNF530Q6P9A1 599 aaPredicted RBP12.92□□□□□ -0.34
SRPK1-209ENST00000507909 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
SRPK1-209ENST00000507909 NFE2L2Q16236 605 aa12.91□□□□□ -0.34
SRPK1-209ENST00000507909 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
SRPK1-209ENST00000507909 CYP27B1O15528 508 aa12.9□□□□□ -0.34
SRPK1-209ENST00000507909 PHKG2P15735 406 aa12.9□□□□□ -0.34
SRPK1-209ENST00000507909 TMPOP42166 694 aaKnown RBP12.9□□□□□ -0.34
SRPK1-209ENST00000507909 AKAP4Q5JQC9 854 aa12.9□□□□□ -0.34
SRPK1-209ENST00000507909 IFNL2Q8IZJ0 200 aa12.9□□□□□ -0.34
SRPK1-209ENST00000507909 DDX54Q8TDD1 881 aaKnown RBP12.9□□□□□ -0.34
SRPK1-209ENST00000507909 MAP3K5Q99683 1374 aa12.9□□□□□ -0.34
SRPK1-209ENST00000507909 VIRMAQ69YN4 1812 aaKnown RBP12.9□□□□□ -0.34
SRPK1-209ENST00000507909 APAF1O14727 1248 aa12.89□□□□□ -0.35
SRPK1-209ENST00000507909 HSP90AB1P08238 724 aaKnown RBP12.89□□□□□ -0.35
SRPK1-209ENST00000507909 KRT27Q7Z3Y8 459 aa12.89□□□□□ -0.35
SRPK1-209ENST00000507909 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
SRPK1-209ENST00000507909 GNAT3A8MTJ3 354 aa12.88□□□□□ -0.35
SRPK1-209ENST00000507909 LMOD3Q0VAK6 560 aa12.88□□□□□ -0.35
SRPK1-209ENST00000507909 MARCH10Q8NA82 808 aaPredicted RBP12.88□□□□□ -0.35
SRPK1-209ENST00000507909 SCN11AQ9UI33 1791 aa12.88□□□□□ -0.35
SRPK1-209ENST00000507909 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
SRPK1-209ENST00000507909 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
SRPK1-209ENST00000507909 RIPK4P57078 832 aa12.87□□□□□ -0.35
SRPK1-209ENST00000507909 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
SRPK1-209ENST00000507909 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
SRPK1-209ENST00000507909 NGEFQ8N5V2 710 aa12.87□□□□□ -0.35
SRPK1-209ENST00000507909 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
SRPK1-209ENST00000507909 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
SRPK1-209ENST00000507909 BCL9O00512 1426 aa12.87□□□□□ -0.35
SRPK1-209ENST00000507909 NEUROD2Q15784 382 aa12.86□□□□□ -0.35
SRPK1-209ENST00000507909 DCAF5Q96JK2 942 aa12.86□□□□□ -0.35
SRPK1-209ENST00000507909 KDM6AO15550 1401 aaPredicted RBP12.86□□□□□ -0.35
SRPK1-209ENST00000507909 DOT1LQ8TEK3 1739 aa12.85□□□□□ -0.35
SRPK1-209ENST00000507909 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
SRPK1-209ENST00000507909 EP400Q96L91 3159 aa12.84□□□□□ -0.35
SRPK1-209ENST00000507909 SBF2Q86WG5 1849 aa12.84□□□□□ -0.35
SRPK1-209ENST00000507909 RNMTO43148 476 aaKnown RBP12.84□□□□□ -0.35
SRPK1-209ENST00000507909 CCDC27Q2M243 656 aa12.84□□□□□ -0.35
SRPK1-209ENST00000507909 MPRIPQ6WCQ1 1025 aa12.84□□□□□ -0.35
SRPK1-209ENST00000507909 MRC1P22897 1456 aa12.84□□□□□ -0.35
SRPK1-209ENST00000507909 ITGB4P16144 1822 aa12.83□□□□□ -0.35
SRPK1-209ENST00000507909 CEMIPQ8WUJ3 1361 aa12.83□□□□□ -0.36
SRPK1-209ENST00000507909 FAM196AQ6ZSG2 479 aa12.83□□□□□ -0.36
SRPK1-209ENST00000507909 TRIM35Q9UPQ4 493 aa12.83□□□□□ -0.36
SRPK1-209ENST00000507909 NHSQ6T4R5 1651 aa12.83□□□□□ -0.36
SRPK1-209ENST00000507909 SENP3-EIF4A1A0A087X0R7 540 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 ERVV-2B6SEH9 535 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 HNRNPUQ00839 825 aaKnown RBP eCLIP12.82□□□□□ -0.36
SRPK1-209ENST00000507909 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 MCM10Q7L590 875 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
SRPK1-209ENST00000507909 SIPA1L3O60292 1781 aaPredicted RBP12.81□□□□□ -0.36
SRPK1-209ENST00000507909 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
SRPK1-209ENST00000507909 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
SRPK1-209ENST00000507909 WWC1Q8IX03 1113 aa12.81□□□□□ -0.36
SRPK1-209ENST00000507909 SALL2Q9Y467 1007 aaPredicted RBP12.81□□□□□ -0.36
SRPK1-209ENST00000507909 CABP4P57796 275 aa12.8□□□□□ -0.36
SRPK1-209ENST00000507909 TEFQ10587 303 aa12.8□□□□□ -0.36
SRPK1-209ENST00000507909 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
SRPK1-209ENST00000507909 THUMPD2Q9BTF0 503 aaKnown RBP12.8□□□□□ -0.36
SRPK1-209ENST00000507909 SLC52A2Q9HAB3 445 aa12.8□□□□□ -0.36
SRPK1-209ENST00000507909 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
SRPK1-209ENST00000507909 SYTL4Q96C24 671 aaPredicted RBP12.79□□□□□ -0.36
SRPK1-209ENST00000507909 TMOD3Q9NYL9 352 aa12.79□□□□□ -0.36
SRPK1-209ENST00000507909 ZNF521Q96K83 1311 aa12.79□□□□□ -0.36
SRPK1-209ENST00000507909 BTAF1O14981 1849 aa12.78□□□□□ -0.36
SRPK1-209ENST00000507909 WDR63Q8IWG1 891 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms