RNA–Protein interactions for RNA: ENST00000507076.1

CALCOCO2-209, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-209ENST00000507076 ANKRD36BQ8N2N9 1353 aa32.4■■■□□ 2.78
CALCOCO2-209ENST00000507076 PRIM1P49642 420 aaKnown RBP32.39■■■□□ 2.78
CALCOCO2-209ENST00000507076 ZNF784Q8NCA9 323 aaPredicted RBP32.39■■■□□ 2.78
CALCOCO2-209ENST00000507076 MAP3K5Q99683 1374 aa32.39■■■□□ 2.78
CALCOCO2-209ENST00000507076 UTRNP46939 3433 aa32.37■■■□□ 2.77
CALCOCO2-209ENST00000507076 NSD2O96028 1365 aa32.37■■■□□ 2.77
CALCOCO2-209ENST00000507076 PNPLA7Q6ZV29 1317 aa32.36■■■□□ 2.77
CALCOCO2-209ENST00000507076 ZCRB1Q8TBF4 217 aaKnown RBP32.36■■■□□ 2.77
CALCOCO2-209ENST00000507076 RRS1Q15050 365 aaKnown RBP32.35■■■□□ 2.77
CALCOCO2-209ENST00000507076 KLHL34Q8N239 644 aa32.35■■■□□ 2.77
CALCOCO2-209ENST00000507076 RTL1A6NKG5 1358 aa32.34■■■□□ 2.77
CALCOCO2-209ENST00000507076 TFCP2L1Q9NZI6 479 aa32.33■■■□□ 2.77
CALCOCO2-209ENST00000507076 USHBP1Q8N6Y0 703 aa32.32■■■□□ 2.76
CALCOCO2-209ENST00000507076 SLC16A10Q8TF71 515 aa32.32■■■□□ 2.76
CALCOCO2-209ENST00000507076 GGNBP2Q9H3C7 697 aa32.32■■■□□ 2.76
CALCOCO2-209ENST00000507076 POLD1P28340 1107 aa32.3■■■□□ 2.76
CALCOCO2-209ENST00000507076 NBPF6Q5VWK0 638 aa32.3■■■□□ 2.76
CALCOCO2-209ENST00000507076 NBPF4Q96M43 638 aa32.3■■■□□ 2.76
CALCOCO2-209ENST00000507076 SLC24A1O60721 1099 aa32.29■■■□□ 2.76
CALCOCO2-209ENST00000507076 C5P01031 1676 aa32.28■■■□□ 2.76
CALCOCO2-209ENST00000507076 FYB1O15117 783 aa32.28■■■□□ 2.76
CALCOCO2-209ENST00000507076 SMG6Q86US8 1419 aaKnown RBP32.27■■■□□ 2.76
CALCOCO2-209ENST00000507076 GPR162Q16538 588 aa32.27■■■□□ 2.76
CALCOCO2-209ENST00000507076 CCNL1Q9UK58 526 aaPredicted RBP32.27■■■□□ 2.76
CALCOCO2-209ENST00000507076 USP47Q96K76 1375 aa32.26■■■□□ 2.75
CALCOCO2-209ENST00000507076 TAF1LQ8IZX4 1826 aa32.26■■■□□ 2.75
CALCOCO2-209ENST00000507076 TMF1P82094 1093 aa32.24■■■□□ 2.75
CALCOCO2-209ENST00000507076 ITGB4P16144 1822 aa32.23■■■□□ 2.75
CALCOCO2-209ENST00000507076 PELP1Q8IZL8 1130 aaKnown RBP32.23■■■□□ 2.75
CALCOCO2-209ENST00000507076 RAPGEF4Q8WZA2 1011 aa32.23■■■□□ 2.75
CALCOCO2-209ENST00000507076 TOGARAM1Q9Y4F4 1720 aa32.22■■■□□ 2.75
CALCOCO2-209ENST00000507076 CGNL1Q0VF96 1302 aa32.21■■■□□ 2.75
CALCOCO2-209ENST00000507076 HSP90AB2PQ58FF8 381 aa32.2■■■□□ 2.75
CALCOCO2-209ENST00000507076 NLGN2Q8NFZ4 835 aa32.2■■■□□ 2.75
CALCOCO2-209ENST00000507076 MSH5O43196 834 aa32.19■■■□□ 2.74
CALCOCO2-209ENST00000507076 TATP17735 454 aaPredicted RBP32.19■■■□□ 2.74
CALCOCO2-209ENST00000507076 INSRP06213 1382 aa32.19■■■□□ 2.74
CALCOCO2-209ENST00000507076 FLT4P35916 1363 aa32.18■■■□□ 2.74
CALCOCO2-209ENST00000507076 PKD1L3Q7Z443 1732 aa32.17■■■□□ 2.74
CALCOCO2-209ENST00000507076 COL23A1Q86Y22 540 aaPredicted RBP32.17■■■□□ 2.74
CALCOCO2-209ENST00000507076 PCDH11XQ9BZA7 1347 aa32.15■■■□□ 2.74
CALCOCO2-209ENST00000507076 PCDH11YQ9BZA8 1340 aa32.15■■■□□ 2.74
CALCOCO2-209ENST00000507076 MSL1Q68DK7 614 aa32.13■■■□□ 2.73
CALCOCO2-209ENST00000507076 ANKRD26Q9UPS8 1709 aa32.13■■■□□ 2.73
CALCOCO2-209ENST00000507076 MAP2P11137 1827 aaKnown RBP32.12■■■□□ 2.73
CALCOCO2-209ENST00000507076 KIF24Q5T7B8 1368 aa32.11■■■□□ 2.73
CALCOCO2-209ENST00000507076 PALLDQ8WX93 1383 aa32.11■■■□□ 2.73
CALCOCO2-209ENST00000507076 C4BP0C0L5 1744 aa32.11■■■□□ 2.73
CALCOCO2-209ENST00000507076 GOLGB1Q14789 3259 aaKnown RBP32.1■■■□□ 2.73
CALCOCO2-209ENST00000507076 NSD3Q9BZ95 1437 aa32.09■■■□□ 2.73
CALCOCO2-209ENST00000507076 CDCA8Q53HL2 280 aa32.09■■■□□ 2.73
CALCOCO2-209ENST00000507076 MPRIPQ6WCQ1 1025 aa32.09■■■□□ 2.73
CALCOCO2-209ENST00000507076 EMILIN1Q9Y6C2 1016 aa32.09■■■□□ 2.73
CALCOCO2-209ENST00000507076 UBR3Q6ZT12 1888 aa32.08■■■□□ 2.73
CALCOCO2-209ENST00000507076 CYP27B1O15528 508 aa32.08■■■□□ 2.73
CALCOCO2-209ENST00000507076 C1QTNF8P60827 252 aa32.08■■■□□ 2.73
CALCOCO2-209ENST00000507076 CARD14Q9BXL6 1004 aa32.08■■■□□ 2.73
CALCOCO2-209ENST00000507076 SENP3-EIF4A1A0A087X0R7 540 aa32.07■■■□□ 2.72
CALCOCO2-209ENST00000507076 YBX3P16989 372 aaKnown RBP eCLIP32.05■■■□□ 2.727e-12■□□□□ 11.1
CALCOCO2-209ENST00000507076 PPM1GO15355 546 aaPredicted RBP32.03■■■□□ 2.72
CALCOCO2-209ENST00000507076 NCAPD2Q15021 1401 aa32.01■■■□□ 2.72
CALCOCO2-209ENST00000507076 GIGYF1O75420 1035 aaPredicted RBP31.98■■■□□ 2.71
CALCOCO2-209ENST00000507076 FLAD1Q8NFF5 587 aa31.98■■■□□ 2.71
CALCOCO2-209ENST00000507076 GRIN3BO60391 1043 aa31.97■■■□□ 2.71
CALCOCO2-209ENST00000507076 AMIGO3Q86WK7 504 aa31.97■■■□□ 2.71
CALCOCO2-209ENST00000507076 SMARCC1Q92922 1105 aaPredicted RBP31.97■■■□□ 2.71
CALCOCO2-209ENST00000507076 AK7Q96M32 723 aa31.97■■■□□ 2.71
CALCOCO2-209ENST00000507076 PIGBQ92521 554 aa31.96■■■□□ 2.71
CALCOCO2-209ENST00000507076 SMIM5Q71RC9 77 aa31.95■■■□□ 2.71
CALCOCO2-209ENST00000507076 PHF14O94880 888 aa31.94■■■□□ 2.7
CALCOCO2-209ENST00000507076 HMGB2P26583 209 aaKnown RBP31.94■■■□□ 2.7
CALCOCO2-209ENST00000507076 TRIM26Q12899 539 aaPredicted RBP31.94■■■□□ 2.7
CALCOCO2-209ENST00000507076 SPG7Q9UQ90 795 aa31.93■■■□□ 2.7
CALCOCO2-209ENST00000507076 CD2APQ9Y5K6 639 aa31.93■■■□□ 2.7
CALCOCO2-209ENST00000507076 NKX1-1Q15270 411 aaPredicted RBP31.92■■■□□ 2.7
CALCOCO2-209ENST00000507076 EYA1Q99502 592 aa31.92■■■□□ 2.7
CALCOCO2-209ENST00000507076 WASHC2AQ641Q2 1341 aa31.92■■■□□ 2.7
CALCOCO2-209ENST00000507076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.88■■■□□ 2.69
CALCOCO2-209ENST00000507076 LINC00116Q8NCU8 138 aa31.88■■■□□ 2.69
CALCOCO2-209ENST00000507076 ATP10DQ9P241 1426 aa31.87■■■□□ 2.69
CALCOCO2-209ENST00000507076 LOC102724428A0A0B4J2F2 783 aa31.87■■■□□ 2.69
CALCOCO2-209ENST00000507076 SIK1P57059 783 aa31.87■■■□□ 2.69
CALCOCO2-209ENST00000507076 POLR3GLQ9BT43 218 aa31.87■■■□□ 2.69
CALCOCO2-209ENST00000507076 TMOD3Q9NYL9 352 aa31.87■■■□□ 2.69
CALCOCO2-209ENST00000507076 POLKQ9UBT6 870 aa31.86■■■□□ 2.69
CALCOCO2-209ENST00000507076 WWC3Q9ULE0 1092 aa31.85■■■□□ 2.69
CALCOCO2-209ENST00000507076 ASAP1Q9ULH1 1129 aa31.85■■■□□ 2.69
CALCOCO2-209ENST00000507076 PHKG2P15735 406 aa31.83■■■□□ 2.69
CALCOCO2-209ENST00000507076 SSFA2P28290 1259 aa31.83■■■□□ 2.69
CALCOCO2-209ENST00000507076 TNNT2P45379 298 aaPredicted RBP31.83■■■□□ 2.69
CALCOCO2-209ENST00000507076 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.83■■■□□ 2.693e-9■□□□□ 9.4
CALCOCO2-209ENST00000507076 ITPK1Q13572 414 aa31.82■■■□□ 2.68
CALCOCO2-209ENST00000507076 IFNL2Q8IZJ0 200 aa31.82■■■□□ 2.68
CALCOCO2-209ENST00000507076 IGSF1Q8N6C5 1336 aa31.81■■■□□ 2.68
CALCOCO2-209ENST00000507076 GNPATO15228 680 aa31.8■■■□□ 2.68
CALCOCO2-209ENST00000507076 EIF4A2Q14240 407 aaKnown RBP31.8■■■□□ 2.68
CALCOCO2-209ENST00000507076 ATP6V1AP38606 617 aa31.79■■■□□ 2.68
CALCOCO2-209ENST00000507076 COL5A3P25940 1745 aaPredicted RBP31.78■■■□□ 2.68
CALCOCO2-209ENST00000507076 KIF13BQ9NQT8 1826 aa31.77■■■□□ 2.68
CALCOCO2-209ENST00000507076 ATG3Q9NT62 314 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms