RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
POLR2J3-211ENST00000506060 PIP4K2BP78356 416 aa15.52■□□□□ 0.08
POLR2J3-211ENST00000506060 C1orf141Q5JVX7 400 aa15.52■□□□□ 0.08
POLR2J3-211ENST00000506060 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 WDR17Q8IZU2 1322 aa15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 ZNF853P0CG23 659 aa15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 EVA1CP58658 441 aa15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 TSR2Q969E8 191 aaKnown RBP15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.07
POLR2J3-211ENST00000506060 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 AKAP4Q5JQC9 854 aa15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 ZNF530Q6P9A1 599 aaPredicted RBP15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 CERKQ8TCT0 537 aa15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 PPP4R2Q9NY27 417 aa15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 SPG7Q9UQ90 795 aa15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 COL16A1Q07092 1604 aaPredicted RBP15.5■□□□□ 0.07
POLR2J3-211ENST00000506060 FAM83GA6ND36 823 aa15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 MS4A1P11836 297 aa15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 RARSP54136 660 aaKnown RBP15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 MCM10Q7L590 875 aa15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 PELP1Q8IZL8 1130 aaKnown RBP15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
POLR2J3-211ENST00000506060 CHL1O00533 1208 aa15.48■□□□□ 0.07
POLR2J3-211ENST00000506060 DCTN1Q14203 1278 aa15.48■□□□□ 0.07
POLR2J3-211ENST00000506060 TOM1L2Q6ZVM7 507 aa15.48■□□□□ 0.07
POLR2J3-211ENST00000506060 MBIPQ9NS73 344 aa15.48■□□□□ 0.07
POLR2J3-211ENST00000506060 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
POLR2J3-211ENST00000506060 OVOS2A0A0G2JMS6 1433 aa15.47■□□□□ 0.07
POLR2J3-211ENST00000506060 ALDH1L2Q3SY69 923 aa15.47■□□□□ 0.07
POLR2J3-211ENST00000506060 CARD10Q9BWT7 1032 aa15.47■□□□□ 0.07
POLR2J3-211ENST00000506060 CRB1P82279 1406 aa15.46■□□□□ 0.07
POLR2J3-211ENST00000506060 CHMP4AQ9BY43 222 aa15.46■□□□□ 0.07
POLR2J3-211ENST00000506060 IPO8O15397 1037 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 HSP90AB1P08238 724 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 TEFQ10587 303 aa15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 TAF7Q15545 349 aaPredicted RBP15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 SMC4Q9NTJ3 1288 aa15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 LRRC37A3O60309 1634 aa15.45■□□□□ 0.06
POLR2J3-211ENST00000506060 SOS1Q07889 1333 aaPredicted RBP15.44■□□□□ 0.06
POLR2J3-211ENST00000506060 KIF16BQ96L93 1317 aa15.44■□□□□ 0.06
POLR2J3-211ENST00000506060 PARP4Q9UKK3 1724 aaKnown RBP15.44■□□□□ 0.06
POLR2J3-211ENST00000506060 BCAR3O75815 825 aa15.44■□□□□ 0.06
POLR2J3-211ENST00000506060 STRN4Q9NRL3 753 aa15.44■□□□□ 0.06
POLR2J3-211ENST00000506060 TWISTNBQ3B726 338 aaPredicted RBP15.43■□□□□ 0.06
POLR2J3-211ENST00000506060 IFNL2Q8IZJ0 200 aa15.43■□□□□ 0.06
POLR2J3-211ENST00000506060 BTG4Q9NY30 223 aa15.43■□□□□ 0.06
POLR2J3-211ENST00000506060 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
POLR2J3-211ENST00000506060 JCADQ9P266 1359 aa15.43■□□□□ 0.06
POLR2J3-211ENST00000506060 PLIN1O60240 522 aa15.42■□□□□ 0.06
POLR2J3-211ENST00000506060 IL17REQ8NFR9 667 aa15.42■□□□□ 0.06
POLR2J3-211ENST00000506060 FRAT1Q92837 279 aaPredicted RBP15.42■□□□□ 0.06
POLR2J3-211ENST00000506060 RNMTO43148 476 aaKnown RBP15.41■□□□□ 0.06
POLR2J3-211ENST00000506060 VAMP4O75379 141 aa15.41■□□□□ 0.06
POLR2J3-211ENST00000506060 IL2RBP14784 551 aa15.41■□□□□ 0.06
POLR2J3-211ENST00000506060 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
POLR2J3-211ENST00000506060 ZKSCAN2Q63HK3 967 aa15.41■□□□□ 0.06
POLR2J3-211ENST00000506060 PKD1L3Q7Z443 1732 aa15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 MEGF6O75095 1541 aa15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 AAMPQ13685 434 aa15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 ZCRB1Q8TBF4 217 aaKnown RBP15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 PCDH11XQ9BZA7 1347 aa15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 PCDH11YQ9BZA8 1340 aa15.4■□□□□ 0.06
POLR2J3-211ENST00000506060 LARP1Q6PKG0 1096 aaKnown RBP15.39■□□□□ 0.05
POLR2J3-211ENST00000506060 SSH1Q8WYL5 1049 aa15.39■□□□□ 0.05
POLR2J3-211ENST00000506060 DCAF5Q96JK2 942 aa15.39■□□□□ 0.05
POLR2J3-211ENST00000506060 NUTM2BA6NNL0 878 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 NUTM2EB1AL46 878 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 PHKG2P15735 406 aa15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 MPRIPQ6WCQ1 1025 aa15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 NUTM2AQ8IVF1 878 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 CCDC136Q96JN2 1154 aa15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 CDCA7Q9BWT1 371 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 SPATA31A6Q5VVP1 1343 aa15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 VIRMAQ69YN4 1812 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-211ENST00000506060 ADAMTS2O95450 1211 aa15.37■□□□□ 0.05
POLR2J3-211ENST00000506060 EXOC6Q8TAG9 804 aa15.37■□□□□ 0.05
POLR2J3-211ENST00000506060 ARHGAP45Q92619 1136 aa15.37■□□□□ 0.05
POLR2J3-211ENST00000506060 CRBNQ96SW2 442 aa15.37■□□□□ 0.05
POLR2J3-211ENST00000506060 BCL2L13Q9BXK5 485 aa15.37■□□□□ 0.05
POLR2J3-211ENST00000506060 PLCH1Q4KWH8 1693 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 ADAMTS7Q9UKP4 1686 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 BTBD11A6QL63 1104 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 ELL2O00472 640 aaPredicted RBP15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 HOXB7P09629 217 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 ATF7IPQ6VMQ6 1270 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 DZIP1LQ8IYY4 767 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 TSPYL6Q8N831 410 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 THRAP3Q9Y2W1 955 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 NWD2Q9ULI1 1742 aa15.36■□□□□ 0.05
POLR2J3-211ENST00000506060 SCN11AQ9UI33 1791 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms