RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 TSGA10IPQ3SY00 556 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 SOGA3Q5TF21 947 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 VPS37DQ86XT2 251 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 DZIP3Q86Y13 1208 aaKnown RBP5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 SLC43A3Q8NBI5 491 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 KCNH8Q96L42 1107 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 PIF1Q9H611 641 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 MAP10Q9P2G4 905 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 KIAA1024Q9UPX6 916 aa5.08□□□□□ -1.6
HMGB1P22-201ENST00000505315 PRPF40AO75400 957 aaKnown RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 STK10O94804 968 aaKnown RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 PUS10Q3MIT2 529 aaKnown RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 KMT5BQ4FZB7 885 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 RNF187Q5TA31 235 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 DESI1Q6ICB0 168 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 PPP1R18Q6NYC8 613 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 CAPN12Q6ZSI9 719 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 ZBTB33Q86T24 672 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 METTL16Q86W50 562 aaKnown RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 SIX5Q8N196 739 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 PHTF2Q8N3S3 785 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 GAS2L2Q8NHY3 880 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 SPACA7Q96KW9 195 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 BCL2L12Q9HB09 334 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 METTL14Q9HCE5 456 aaKnown RBP5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 KIAA1468Q9P260 1216 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 PPME1Q9Y570 386 aa5.07□□□□□ -1.6
HMGB1P22-201ENST00000505315 ZBTB7BO15156 539 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 FANCCQ00597 558 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 FKBP5Q13451 457 aaPredicted RBP5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 EGFLAMQ63HQ2 1017 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 ARMC2Q8NEN0 867 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 ARHGAP9Q9BRR9 750 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 RBCK1Q9BYM8 510 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 OSBPL2Q9H1P3 480 aa5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 METTL5Q9NRN9 209 aaKnown RBP5.06□□□□□ -1.6
HMGB1P22-201ENST00000505315 RIMBP2O15034 1052 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 MPSTP25325 297 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 ECM1Q16610 540 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 TRAF7Q6Q0C0 670 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 TMC4Q7Z404 712 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 TSEN2Q8NCE0 465 aaKnown RBP5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 ZCRB1Q8TBF4 217 aaKnown RBP5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 ADAM32Q8TC27 787 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 HELQQ8TDG4 1101 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 ARMC5Q96C12 935 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 MRFAP1L1Q96HT8 127 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 GPATCH3Q96I76 525 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 KCNK17Q96T54 332 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 MYH16Q9H6N6 1097 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 RNF19AQ9NV58 838 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 KLHL42Q9P2K6 505 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 SEPT9Q9UHD8 586 aaPredicted RBP5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 LHX6Q9UPM6 363 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 SLC27A5Q9Y2P5 690 aa5.05□□□□□ -1.6
HMGB1P22-201ENST00000505315 PLEKHD1A6NEE1 506 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 TREHO43280 583 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 EHHADHQ08426 723 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 TCEAL1Q15170 157 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 LDLRAD1Q5T700 205 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 GORABQ5T7V8 394 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 NBPF14Q5TI25 921 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 CC2D2BQ6DHV5 1058 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 PDXDC2PQ6P474 469 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 CHMP7Q8WUX9 453 aaPredicted RBP5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 PURBQ96QR8 312 aaKnown RBP5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 USB1Q9BQ65 265 aaKnown RBP5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 PRKD2Q9BZL6 878 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 ESF1Q9H501 851 aaKnown RBP5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 WWC3Q9ULE0 1092 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 TBX22Q9Y458 520 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 GPSM3Q9Y4H4 160 aa5.04□□□□□ -1.6
HMGB1P22-201ENST00000505315 PSDA5PKW4 1024 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 CLCN6P51797 869 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 DAB2P98082 770 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 FMR1Q06787 632 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 USP4Q13107 963 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 DOK7Q18PE1 504 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 ZNF654Q8IZM8 581 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 KCNB2Q92953 911 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 DMRTB1Q96MA1 342 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 CCDC85AQ96PX6 553 aaPredicted RBP5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 CARD14Q9BXL6 1004 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 CYLDQ9NQC7 956 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 DMGDHQ9UI17 866 aaKnown RBP5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 RIPOR2Q9Y4F9 1068 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 PCDHGB7Q9Y5F8 929 aa5.03□□□□□ -1.6
HMGB1P22-201ENST00000505315 LOC102724159A0A0B4J2E5 919 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 MAGEB6P1A0A0J9YX57 407 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 TPD52L2O43399 206 aaKnown RBP5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 DKK1O94907 266 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 WEE1P30291 646 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 PWP2Q15269 919 aaKnown RBP5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 NFE2L2Q16236 605 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 ZNF394Q53GI3 561 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 HSP90AB2PQ58FF8 381 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 MORN1Q5T089 497 aa5.02□□□□□ -1.61
HMGB1P22-201ENST00000505315 CCDC181Q5TID7 509 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms