RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 LILRA1O75019 489 aa8.14□□□□□ -1.11
RFC1-208ENST00000504849 HAP1P54257 671 aaPredicted RBP8.14□□□□□ -1.11
RFC1-208ENST00000504849 RNF144AP50876 292 aaPredicted RBP8.13□□□□□ -1.11
RFC1-208ENST00000504849 DOC2BQ14184 412 aa8.13□□□□□ -1.11
RFC1-208ENST00000504849 RIPOR1Q6ZS17 1223 aa8.13□□□□□ -1.11
RFC1-208ENST00000504849 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
RFC1-208ENST00000504849 GPKOWQ92917 476 aaPredicted RBP eCLIP8.13□□□□□ -1.11
RFC1-208ENST00000504849 BEGAINQ9BUH8 593 aa8.13□□□□□ -1.11
RFC1-208ENST00000504849 VSIG10Q8N0Z9 540 aa8.12□□□□□ -1.11
RFC1-208ENST00000504849 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
RFC1-208ENST00000504849 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
RFC1-208ENST00000504849 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
RFC1-208ENST00000504849 TRERF1Q96PN7 1200 aa8.1□□□□□ -1.11
RFC1-208ENST00000504849 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
RFC1-208ENST00000504849 GOLGA2P5Q9HBQ8 144 aa8.1□□□□□ -1.11
RFC1-208ENST00000504849 NSFL1CQ9UNZ2 370 aaKnown RBP8.1□□□□□ -1.11
RFC1-208ENST00000504849 DYRK1BQ9Y463 629 aa8.1□□□□□ -1.11
RFC1-208ENST00000504849 THBS1P07996 1170 aa8.09□□□□□ -1.11
RFC1-208ENST00000504849 MAP2K3P46734 347 aa8.09□□□□□ -1.11
RFC1-208ENST00000504849 GIGYF2Q6Y7W6 1299 aaKnown RBP8.09□□□□□ -1.11
RFC1-208ENST00000504849 TSC1Q92574 1164 aa8.09□□□□□ -1.11
RFC1-208ENST00000504849 RRAGCQ9HB90 399 aa8.09□□□□□ -1.11
RFC1-208ENST00000504849 H7C1W4 665 aa8.08□□□□□ -1.12
RFC1-208ENST00000504849 QPCTQ16769 361 aa8.08□□□□□ -1.12
RFC1-208ENST00000504849 ARTNQ5T4W7 220 aa8.08□□□□□ -1.12
RFC1-208ENST00000504849 KLRG1Q96E93 195 aa8.08□□□□□ -1.12
RFC1-208ENST00000504849 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
RFC1-208ENST00000504849 SCO2A0A1W2PP80 73 aa8.07□□□□□ -1.12
RFC1-208ENST00000504849 RSPO4Q2I0M5 234 aaPredicted RBP8.07□□□□□ -1.12
RFC1-208ENST00000504849 PDXDC2PQ6P474 469 aa8.07□□□□□ -1.12
RFC1-208ENST00000504849 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
RFC1-208ENST00000504849 EDARADDQ8WWZ3 215 aa8.07□□□□□ -1.12
RFC1-208ENST00000504849 PRKCSHP14314 528 aaPredicted RBP8.06□□□□□ -1.12
RFC1-208ENST00000504849 CSPP1Q1MSJ5 1256 aa8.06□□□□□ -1.12
RFC1-208ENST00000504849 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
RFC1-208ENST00000504849 DIXDC1Q155Q3 683 aa8.05□□□□□ -1.12
RFC1-208ENST00000504849 AMHR2Q16671 573 aa8.05□□□□□ -1.12
RFC1-208ENST00000504849 GAS2L1Q99501 681 aaPredicted RBP8.05□□□□□ -1.12
RFC1-208ENST00000504849 ZFP64Q9NPA5 681 aa8.05□□□□□ -1.12
RFC1-208ENST00000504849 GNB5O14775 395 aa8.04□□□□□ -1.12
RFC1-208ENST00000504849 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
RFC1-208ENST00000504849 ERVH48-1M5A8F1 160 aa8.03□□□□□ -1.12
RFC1-208ENST00000504849 LILRB3O75022 631 aa8.03□□□□□ -1.12
RFC1-208ENST00000504849 NKAPLQ5M9Q1 402 aa8.03□□□□□ -1.12
RFC1-208ENST00000504849 NUCKS1Q9H1E3 243 aaKnown RBP8.03□□□□□ -1.12
RFC1-208ENST00000504849 GPC1P35052 558 aa8.02□□□□□ -1.13
RFC1-208ENST00000504849 DGKGP49619 791 aa8.02□□□□□ -1.13
RFC1-208ENST00000504849 POU4F2Q12837 409 aa8.02□□□□□ -1.13
RFC1-208ENST00000504849 LCE1DQ5T752 114 aa8.02□□□□□ -1.13
RFC1-208ENST00000504849 CFHR5Q9BXR6 569 aa8.02□□□□□ -1.13
RFC1-208ENST00000504849 GDF2Q9UK05 429 aaPredicted RBP8.02□□□□□ -1.13
RFC1-208ENST00000504849 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
RFC1-208ENST00000504849 ZBTB33Q86T24 672 aa8□□□□□ -1.13
RFC1-208ENST00000504849 RAB15P59190 212 aa7.99□□□□□ -1.13
RFC1-208ENST00000504849 UBAP2LQ14157 1087 aaKnown RBP7.99□□□□□ -1.13
RFC1-208ENST00000504849 SLCO4C1Q6ZQN7 724 aa7.99□□□□□ -1.13
RFC1-208ENST00000504849 GOLGA6L1Q8N7Z2 621 aa7.99□□□□□ -1.13
RFC1-208ENST00000504849 FKBPLQ9UIM3 349 aa7.99□□□□□ -1.13
RFC1-208ENST00000504849 C2CD2LO14523 706 aa7.98□□□□□ -1.13
RFC1-208ENST00000504849 TUSC1Q2TAM9 212 aa7.98□□□□□ -1.13
RFC1-208ENST00000504849 NBPF10Q6P3W6 841 aaKnown RBP7.98□□□□□ -1.13
RFC1-208ENST00000504849 NBPF15Q8N660 670 aa7.98□□□□□ -1.13
RFC1-208ENST00000504849 HELBQ8NG08 1087 aaPredicted RBP7.98□□□□□ -1.13
RFC1-208ENST00000504849 BTBD6Q96KE9 485 aa7.98□□□□□ -1.13
RFC1-208ENST00000504849 NUTM2BA6NNL0 878 aaPredicted RBP7.97□□□□□ -1.13
RFC1-208ENST00000504849 ESPNB1AK53 854 aa7.97□□□□□ -1.13
RFC1-208ENST00000504849 NUTM2EB1AL46 878 aaPredicted RBP7.97□□□□□ -1.13
RFC1-208ENST00000504849 GATA4P43694 442 aa7.97□□□□□ -1.13
RFC1-208ENST00000504849 NUTM2DQ5VT03 806 aaPredicted RBP7.97□□□□□ -1.13
RFC1-208ENST00000504849 NUTM2AQ8IVF1 878 aaPredicted RBP7.97□□□□□ -1.13
RFC1-208ENST00000504849 ADAM32Q8TC27 787 aa7.97□□□□□ -1.13
RFC1-208ENST00000504849 DYRK3O43781 588 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 AMPD1P23109 780 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 NBPF20Q3BBV1 942 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 GRIP2Q9C0E4 1043 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 NOP53Q9NZM5 478 aaKnown RBP7.96□□□□□ -1.14
RFC1-208ENST00000504849 GGA1Q9UJY5 639 aa7.96□□□□□ -1.14
RFC1-208ENST00000504849 SPATA31C2B4DYI2 1134 aa7.95□□□□□ -1.14
RFC1-208ENST00000504849 PIK3R2O00459 728 aa7.95□□□□□ -1.14
RFC1-208ENST00000504849 F11P03951 625 aa7.95□□□□□ -1.14
RFC1-208ENST00000504849 EPXP11678 715 aa7.95□□□□□ -1.14
RFC1-208ENST00000504849 A0A1W2PRU2 124 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 ATP5J2-PTCD1G3V325 749 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 MEN1O00255 615 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 TPRNQ4KMQ1 711 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 NBPF11Q86T75 865 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 TPSG1Q9NRR2 321 aa7.94□□□□□ -1.14
RFC1-208ENST00000504849 CTDSPL2Q05D32 466 aa7.93□□□□□ -1.14
RFC1-208ENST00000504849 WDR44Q5JSH3 913 aa7.93□□□□□ -1.14
RFC1-208ENST00000504849 PARP9Q8IXQ6 854 aa7.93□□□□□ -1.14
RFC1-208ENST00000504849 ZC3H4Q9UPT8 1303 aaKnown RBP7.93□□□□□ -1.14
RFC1-208ENST00000504849 TIMMDC1Q9NPL8 285 aa7.92□□□□□ -1.14
RFC1-208ENST00000504849 LRRN4Q8WUT4 740 aa7.91□□□□□ -1.14
RFC1-208ENST00000504849 TRIM11Q96F44 468 aa7.91□□□□□ -1.14
RFC1-208ENST00000504849 GPSM3Q9Y4H4 160 aa7.91□□□□□ -1.14
RFC1-208ENST00000504849 PTK2Q05397 1052 aa7.9□□□□□ -1.14
RFC1-208ENST00000504849 PRSS36Q5K4E3 855 aa7.9□□□□□ -1.14
RFC1-208ENST00000504849 SLC27A3Q5K4L6 730 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms