RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 ATF5Q9Y2D1 282 aaPredicted RBP23.8■■□□□ 1.4
SDHA-205ENST00000504824 MTFR1LQ9H019 292 aa23.79■■□□□ 1.4
SDHA-205ENST00000504824 KIF24Q5T7B8 1368 aa23.79■■□□□ 1.4
SDHA-205ENST00000504824 NBPF6Q5VWK0 638 aa23.78■■□□□ 1.4
SDHA-205ENST00000504824 ZCRB1Q8TBF4 217 aaKnown RBP23.78■■□□□ 1.4
SDHA-205ENST00000504824 NBPF4Q96M43 638 aa23.78■■□□□ 1.4
SDHA-205ENST00000504824 INSRP06213 1382 aa23.78■■□□□ 1.4
SDHA-205ENST00000504824 EMILIN1Q9Y6C2 1016 aa23.77■■□□□ 1.4
SDHA-205ENST00000504824 FLT4P35916 1363 aa23.77■■□□□ 1.4
SDHA-205ENST00000504824 PPM1GO15355 546 aaPredicted RBP23.76■■□□□ 1.39
SDHA-205ENST00000504824 YY1P25490 414 aa23.76■■□□□ 1.39
SDHA-205ENST00000504824 RGPD2P0DJD1 1756 aa23.76■■□□□ 1.39
SDHA-205ENST00000504824 SLC27A3Q5K4L6 730 aa23.76■■□□□ 1.39
SDHA-205ENST00000504824 RAPGEF4Q8WZA2 1011 aa23.76■■□□□ 1.39
SDHA-205ENST00000504824 PAPPAQ13219 1627 aa23.75■■□□□ 1.39
SDHA-205ENST00000504824 DOT1LQ8TEK3 1739 aa23.74■■□□□ 1.39
SDHA-205ENST00000504824 PTGER2P43116 358 aa23.74■■□□□ 1.39
SDHA-205ENST00000504824 MEGF6O75095 1541 aa23.74■■□□□ 1.39
SDHA-205ENST00000504824 PRIM1P49642 420 aaKnown RBP23.73■■□□□ 1.39
SDHA-205ENST00000504824 USHBP1Q8N6Y0 703 aa23.73■■□□□ 1.39
SDHA-205ENST00000504824 TATP17735 454 aaPredicted RBP23.72■■□□□ 1.39
SDHA-205ENST00000504824 TNNT2P45379 298 aaPredicted RBP23.72■■□□□ 1.39
SDHA-205ENST00000504824 POLKQ9UBT6 870 aa23.71■■□□□ 1.39
SDHA-205ENST00000504824 WASHC2AQ641Q2 1341 aa23.7■■□□□ 1.38
SDHA-205ENST00000504824 ZNF827Q17R98 1081 aa23.7■■□□□ 1.38
SDHA-205ENST00000504824 LRRC4BQ9NT99 713 aa23.7■■□□□ 1.38
SDHA-205ENST00000504824 KIF7Q2M1P5 1343 aa23.69■■□□□ 1.38
SDHA-205ENST00000504824 SHANK3Q9BYB0 1731 aa23.69■■□□□ 1.38
SDHA-205ENST00000504824 FHDC1Q9C0D6 1143 aaPredicted RBP23.68■■□□□ 1.38
SDHA-205ENST00000504824 KNSTRNQ9Y448 316 aa23.68■■□□□ 1.38
SDHA-205ENST00000504824 MAP2P11137 1827 aaKnown RBP23.68■■□□□ 1.38
SDHA-205ENST00000504824 ARXQ96QS3 562 aa23.67■■□□□ 1.38
SDHA-205ENST00000504824 TFCP2L1Q9NZI6 479 aa23.67■■□□□ 1.38
SDHA-205ENST00000504824 PCDH11XQ9BZA7 1347 aa23.66■■□□□ 1.38
SDHA-205ENST00000504824 PCDH11YQ9BZA8 1340 aa23.66■■□□□ 1.38
SDHA-205ENST00000504824 SLC16A10Q8TF71 515 aa23.66■■□□□ 1.38
SDHA-205ENST00000504824 AKT1S1Q96B36 256 aa23.66■■□□□ 1.38
SDHA-205ENST00000504824 SYT17Q9BSW7 474 aa23.66■■□□□ 1.38
SDHA-205ENST00000504824 NSD2O96028 1365 aa23.65■■□□□ 1.38
SDHA-205ENST00000504824 POLD1P28340 1107 aa23.65■■□□□ 1.38
SDHA-205ENST00000504824 MORC1Q86VD1 984 aa23.65■■□□□ 1.38
SDHA-205ENST00000504824 CCNL1Q9UK58 526 aaPredicted RBP23.65■■□□□ 1.38
SDHA-205ENST00000504824 QSER1Q2KHR3 1735 aa23.64■■□□□ 1.38
SDHA-205ENST00000504824 SGIP1Q9BQI5 828 aa23.64■■□□□ 1.37
SDHA-205ENST00000504824 LY75O60449 1722 aa23.64■■□□□ 1.37
SDHA-205ENST00000504824 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
SDHA-205ENST00000504824 HMGB2P26583 209 aaKnown RBP23.63■■□□□ 1.37
SDHA-205ENST00000504824 EYA1Q99502 592 aa23.62■■□□□ 1.37
SDHA-205ENST00000504824 KCNQ4P56696 695 aa23.61■■□□□ 1.37
SDHA-205ENST00000504824 KLHL34Q8N239 644 aa23.6■■□□□ 1.37
SDHA-205ENST00000504824 PNPLA7Q6ZV29 1317 aa23.6■■□□□ 1.37
SDHA-205ENST00000504824 EIF4A2Q14240 407 aaKnown RBP23.59■■□□□ 1.37
SDHA-205ENST00000504824 MSH5O43196 834 aa23.59■■□□□ 1.37
SDHA-205ENST00000504824 AMER1Q5JTC6 1135 aaPredicted RBP23.59■■□□□ 1.37
SDHA-205ENST00000504824 MAP3K5Q99683 1374 aa23.58■■□□□ 1.37
SDHA-205ENST00000504824 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
SDHA-205ENST00000504824 NCAPD2Q15021 1401 aa23.56■■□□□ 1.36
SDHA-205ENST00000504824 PER1O15534 1290 aaPredicted RBP23.56■■□□□ 1.36
SDHA-205ENST00000504824 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
SDHA-205ENST00000504824 SPG7Q9UQ90 795 aa23.56■■□□□ 1.36
SDHA-205ENST00000504824 CYP27B1O15528 508 aa23.54■■□□□ 1.36
SDHA-205ENST00000504824 PALLDQ8WX93 1383 aa23.54■■□□□ 1.36
SDHA-205ENST00000504824 SMARCC1Q92922 1105 aaPredicted RBP23.53■■□□□ 1.36
SDHA-205ENST00000504824 PKD1L3Q7Z443 1732 aa23.53■■□□□ 1.36
SDHA-205ENST00000504824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.52■■□□□ 1.36
SDHA-205ENST00000504824 C5P01031 1676 aa23.52■■□□□ 1.36
SDHA-205ENST00000504824 GPR162Q16538 588 aa23.51■■□□□ 1.35
SDHA-205ENST00000504824 IGSF1Q8N6C5 1336 aa23.5■■□□□ 1.35
SDHA-205ENST00000504824 FLAD1Q8NFF5 587 aa23.5■■□□□ 1.35
SDHA-205ENST00000504824 CHD4Q14839 1912 aa23.49■■□□□ 1.35
SDHA-205ENST00000504824 COL24A1Q17RW2 1714 aa23.49■■□□□ 1.35
SDHA-205ENST00000504824 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
SDHA-205ENST00000504824 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
SDHA-205ENST00000504824 ITGB4P16144 1822 aa23.48■■□□□ 1.35
SDHA-205ENST00000504824 NKX1-1Q15270 411 aaPredicted RBP23.48■■□□□ 1.35
SDHA-205ENST00000504824 COL23A1Q86Y22 540 aaPredicted RBP23.48■■□□□ 1.35
SDHA-205ENST00000504824 TOGARAM1Q9Y4F4 1720 aa23.48■■□□□ 1.35
SDHA-205ENST00000504824 AK7Q96M32 723 aa23.47■■□□□ 1.35
SDHA-205ENST00000504824 MTHFSP49914 203 aa23.46■■□□□ 1.35
SDHA-205ENST00000504824 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
SDHA-205ENST00000504824 TMOD3Q9NYL9 352 aa23.45■■□□□ 1.34
SDHA-205ENST00000504824 TAF1LQ8IZX4 1826 aa23.45■■□□□ 1.34
SDHA-205ENST00000504824 PHKG2P15735 406 aa23.44■■□□□ 1.34
SDHA-205ENST00000504824 IL13P35225 146 aa23.43■■□□□ 1.34
SDHA-205ENST00000504824 CNGB1Q14028 1251 aaPredicted RBP23.43■■□□□ 1.34
SDHA-205ENST00000504824 MSL1Q68DK7 614 aa23.43■■□□□ 1.34
SDHA-205ENST00000504824 PIGBQ92521 554 aa23.43■■□□□ 1.34
SDHA-205ENST00000504824 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
SDHA-205ENST00000504824 ZNF784Q8NCA9 323 aaPredicted RBP23.42■■□□□ 1.34
SDHA-205ENST00000504824 C4BP0C0L5 1744 aa23.42■■□□□ 1.34
SDHA-205ENST00000504824 SULT6B1Q6IMI4 303 aa23.42■■□□□ 1.34
SDHA-205ENST00000504824 PLEKHG2Q9H7P9 1386 aa23.41■■□□□ 1.34
SDHA-205ENST00000504824 NPC1L1Q9UHC9 1359 aa23.41■■□□□ 1.34
SDHA-205ENST00000504824 AEBP1Q8IUX7 1158 aa23.41■■□□□ 1.34
SDHA-205ENST00000504824 AMOTQ4VCS5 1084 aa23.4■■□□□ 1.34
SDHA-205ENST00000504824 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
SDHA-205ENST00000504824 LOC102724428A0A0B4J2F2 783 aa23.38■■□□□ 1.33
SDHA-205ENST00000504824 PHF14O94880 888 aa23.38■■□□□ 1.33
SDHA-205ENST00000504824 SIK1P57059 783 aa23.38■■□□□ 1.33
SDHA-205ENST00000504824 HSP90AB1P08238 724 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms