RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 SYTL4Q96C24 671 aaPredicted RBP10.81□□□□□ -0.68
MATR3-210ENST00000504643 FHDC1Q9C0D6 1143 aaPredicted RBP10.81□□□□□ -0.68
MATR3-210ENST00000504643 TFCP2L1Q9NZI6 479 aa10.81□□□□□ -0.68
MATR3-210ENST00000504643 FLAD1Q8NFF5 587 aa10.8□□□□□ -0.68
MATR3-210ENST00000504643 PDGFDQ9GZP0 370 aaPredicted RBP10.8□□□□□ -0.68
MATR3-210ENST00000504643 INSRP06213 1382 aa10.8□□□□□ -0.68
MATR3-210ENST00000504643 GGNBP2Q9H3C7 697 aa10.8□□□□□ -0.68
MATR3-210ENST00000504643 LRRC4BQ9NT99 713 aa10.8□□□□□ -0.68
MATR3-210ENST00000504643 FLT4P35916 1363 aa10.79□□□□□ -0.68
MATR3-210ENST00000504643 NBPF6Q5VWK0 638 aa10.79□□□□□ -0.68
MATR3-210ENST00000504643 NBPF4Q96M43 638 aa10.79□□□□□ -0.68
MATR3-210ENST00000504643 PCDH11XQ9BZA7 1347 aa10.79□□□□□ -0.68
MATR3-210ENST00000504643 PCDH11YQ9BZA8 1340 aa10.79□□□□□ -0.68
MATR3-210ENST00000504643 RRS1Q15050 365 aaKnown RBP10.78□□□□□ -0.68
MATR3-210ENST00000504643 SMARCC1Q92922 1105 aaPredicted RBP10.78□□□□□ -0.68
MATR3-210ENST00000504643 CCNL1Q9UK58 526 aaPredicted RBP10.78□□□□□ -0.68
MATR3-210ENST00000504643 NSD2O96028 1365 aa10.78□□□□□ -0.68
MATR3-210ENST00000504643 ZNF827Q17R98 1081 aa10.78□□□□□ -0.68
MATR3-210ENST00000504643 BTAF1O14981 1849 aa10.77□□□□□ -0.69
MATR3-210ENST00000504643 PAPPAQ13219 1627 aa10.77□□□□□ -0.69
MATR3-210ENST00000504643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.76□□□□□ -0.694e-8■■■□□ 17.8
MATR3-210ENST00000504643 SPG7Q9UQ90 795 aa10.76□□□□□ -0.69
MATR3-210ENST00000504643 GPR162Q16538 588 aa10.76□□□□□ -0.69
MATR3-210ENST00000504643 PNPLA7Q6ZV29 1317 aa10.76□□□□□ -0.69
MATR3-210ENST00000504643 HSP90AB2PQ58FF8 381 aa10.75□□□□□ -0.69
MATR3-210ENST00000504643 PLEKHG2Q9H7P9 1386 aa10.75□□□□□ -0.69
MATR3-210ENST00000504643 FBLN1P23142 703 aa10.75□□□□□ -0.69
MATR3-210ENST00000504643 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
MATR3-210ENST00000504643 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
MATR3-210ENST00000504643 WASHC2AQ641Q2 1341 aa10.74□□□□□ -0.69
MATR3-210ENST00000504643 MEGF6O75095 1541 aa10.74□□□□□ -0.69
MATR3-210ENST00000504643 MYOM1P52179 1685 aa10.74□□□□□ -0.69
MATR3-210ENST00000504643 NKX1-1Q15270 411 aaPredicted RBP10.74□□□□□ -0.69
MATR3-210ENST00000504643 NSD3Q9BZ95 1437 aa10.73□□□□□ -0.69
MATR3-210ENST00000504643 QSER1Q2KHR3 1735 aa10.73□□□□□ -0.69
MATR3-210ENST00000504643 MSH5O43196 834 aa10.73□□□□□ -0.69
MATR3-210ENST00000504643 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
MATR3-210ENST00000504643 USHBP1Q8N6Y0 703 aa10.72□□□□□ -0.69
MATR3-210ENST00000504643 ZNF784Q8NCA9 323 aaPredicted RBP10.72□□□□□ -0.69
MATR3-210ENST00000504643 MPRIPQ6WCQ1 1025 aa10.72□□□□□ -0.69
MATR3-210ENST00000504643 CD2APQ9Y5K6 639 aa10.72□□□□□ -0.69
MATR3-210ENST00000504643 PALLDQ8WX93 1383 aa10.71□□□□□ -0.69
MATR3-210ENST00000504643 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
MATR3-210ENST00000504643 COL23A1Q86Y22 540 aaPredicted RBP10.71□□□□□ -0.69
MATR3-210ENST00000504643 IFNL2Q8IZJ0 200 aa10.71□□□□□ -0.69
MATR3-210ENST00000504643 CYP27B1O15528 508 aa10.71□□□□□ -0.7
MATR3-210ENST00000504643 HSP90AB1P08238 724 aaKnown RBP10.71□□□□□ -0.7
MATR3-210ENST00000504643 EIF4G2P78344 907 aaKnown RBP eCLIP10.71□□□□□ -0.7
MATR3-210ENST00000504643 KLHL34Q8N239 644 aa10.71□□□□□ -0.7
MATR3-210ENST00000504643 AK7Q96M32 723 aa10.71□□□□□ -0.7
MATR3-210ENST00000504643 EMILIN1Q9Y6C2 1016 aa10.71□□□□□ -0.7
MATR3-210ENST00000504643 LY75O60449 1722 aa10.7□□□□□ -0.7
MATR3-210ENST00000504643 NCAPD2Q15021 1401 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 KCNQ4P56696 695 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 DOT1LQ8TEK3 1739 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 EYA1Q99502 592 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 TMOD3Q9NYL9 352 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 POLKQ9UBT6 870 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 KIF20BQ96Q89 1820 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 SSFA2P28290 1259 aa10.69□□□□□ -0.7
MATR3-210ENST00000504643 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
MATR3-210ENST00000504643 PIGBQ92521 554 aa10.68□□□□□ -0.7
MATR3-210ENST00000504643 AMOTQ4VCS5 1084 aa10.68□□□□□ -0.7
MATR3-210ENST00000504643 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
MATR3-210ENST00000504643 ERVV-2B6SEH9 535 aa10.67□□□□□ -0.7
MATR3-210ENST00000504643 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
MATR3-210ENST00000504643 PHKG2P15735 406 aa10.67□□□□□ -0.7
MATR3-210ENST00000504643 SIK1P57059 783 aa10.67□□□□□ -0.7
MATR3-210ENST00000504643 PLEKHO1Q53GL0 409 aaPredicted RBP10.67□□□□□ -0.7
MATR3-210ENST00000504643 SHANK3Q9BYB0 1731 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 RGPD2P0DJD1 1756 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 CHD4Q14839 1912 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 PCGF6Q9BYE7 350 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 C1QTNF8P60827 252 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
MATR3-210ENST00000504643 ATP6V1AP38606 617 aa10.65□□□□□ -0.71
MATR3-210ENST00000504643 EIF4A2Q14240 407 aaKnown RBP10.65□□□□□ -0.71
MATR3-210ENST00000504643 NLGN2Q8NFZ4 835 aa10.65□□□□□ -0.71
MATR3-210ENST00000504643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.64□□□□□ -0.71
MATR3-210ENST00000504643 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
MATR3-210ENST00000504643 ADRA2BP18089 450 aa10.64□□□□□ -0.71
MATR3-210ENST00000504643 RC3H1Q5TC82 1133 aaKnown RBP10.64□□□□□ -0.71
MATR3-210ENST00000504643 PANK3Q9H999 370 aa10.64□□□□□ -0.71
MATR3-210ENST00000504643 PKD1L3Q7Z443 1732 aa10.64□□□□□ -0.71
MATR3-210ENST00000504643 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 MORC1Q86VD1 984 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 NLGN1Q8N2Q7 840 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 KNSTRNQ9Y448 316 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 IGSF1Q8N6C5 1336 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 TRAPPC3LQ5T215 181 aa10.63□□□□□ -0.71
MATR3-210ENST00000504643 RTCBQ9Y3I0 505 aaKnown RBP10.63□□□□□ -0.71
MATR3-210ENST00000504643 C5P01031 1676 aa10.62□□□□□ -0.71
MATR3-210ENST00000504643 HSPA5P11021 654 aaKnown RBP10.62□□□□□ -0.71
MATR3-210ENST00000504643 C1orf141Q5JVX7 400 aa10.62□□□□□ -0.71
MATR3-210ENST00000504643 ANKRD26Q9UPS8 1709 aa10.62□□□□□ -0.71
MATR3-210ENST00000504643 TNNT2P45379 298 aaPredicted RBP10.62□□□□□ -0.71
MATR3-210ENST00000504643 CABP4P57796 275 aa10.62□□□□□ -0.71
MATR3-210ENST00000504643 ATG3Q9NT62 314 aa10.62□□□□□ -0.71
MATR3-210ENST00000504643 ASAP1Q9ULH1 1129 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms