RNA–Protein interactions for RNA: ENST00000504224.5

RNF4-205, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-205ENST00000504224 SMG6Q86US8 1419 aaKnown RBP29.97■■■□□ 2.39
RNF4-205ENST00000504224 MEGF6O75095 1541 aa29.97■■■□□ 2.39
RNF4-205ENST00000504224 SYT17Q9BSW7 474 aa29.97■■■□□ 2.39
RNF4-205ENST00000504224 RGPD2P0DJD1 1756 aa29.96■■■□□ 2.39
RNF4-205ENST00000504224 SGIP1Q9BQI5 828 aa29.96■■■□□ 2.39
RNF4-205ENST00000504224 KCNQ4P56696 695 aa29.95■■■□□ 2.39
RNF4-205ENST00000504224 RAPGEF4Q8WZA2 1011 aa29.95■■■□□ 2.39
RNF4-205ENST00000504224 ARXQ96QS3 562 aa29.95■■■□□ 2.39
RNF4-205ENST00000504224 AKT1S1Q96B36 256 aa29.94■■■□□ 2.38
RNF4-205ENST00000504224 HSP90AB2PQ58FF8 381 aa29.92■■■□□ 2.38
RNF4-205ENST00000504224 DOT1LQ8TEK3 1739 aa29.91■■■□□ 2.38
RNF4-205ENST00000504224 TATP17735 454 aaPredicted RBP29.91■■■□□ 2.38
RNF4-205ENST00000504224 TFCP2L1Q9NZI6 479 aa29.91■■■□□ 2.38
RNF4-205ENST00000504224 PCGF6Q9BYE7 350 aa29.9■■■□□ 2.38
RNF4-205ENST00000504224 CGNL1Q0VF96 1302 aa29.9■■■□□ 2.38
RNF4-205ENST00000504224 NSD2O96028 1365 aa29.9■■■□□ 2.38
RNF4-205ENST00000504224 INSRP06213 1382 aa29.89■■■□□ 2.37
RNF4-205ENST00000504224 FLT4P35916 1363 aa29.88■■■□□ 2.37
RNF4-205ENST00000504224 SHANK3Q9BYB0 1731 aa29.88■■■□□ 2.37
RNF4-205ENST00000504224 KLHL34Q8N239 644 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 SLC16A10Q8TF71 515 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 CARD14Q9BXL6 1004 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 CCNL1Q9UK58 526 aaPredicted RBP29.87■■■□□ 2.37
RNF4-205ENST00000504224 PNPLA7Q6ZV29 1317 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 KIF20BQ96Q89 1820 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 NSD3Q9BZ95 1437 aa29.87■■■□□ 2.37
RNF4-205ENST00000504224 POLD1P28340 1107 aa29.84■■■□□ 2.37
RNF4-205ENST00000504224 KIF24Q5T7B8 1368 aa29.83■■■□□ 2.37
RNF4-205ENST00000504224 PPM1GO15355 546 aaPredicted RBP29.83■■■□□ 2.37
RNF4-205ENST00000504224 EMILIN1Q9Y6C2 1016 aa29.83■■■□□ 2.37
RNF4-205ENST00000504224 PCDH11XQ9BZA7 1347 aa29.82■■■□□ 2.36
RNF4-205ENST00000504224 PCDH11YQ9BZA8 1340 aa29.82■■■□□ 2.36
RNF4-205ENST00000504224 MSH5O43196 834 aa29.81■■■□□ 2.36
RNF4-205ENST00000504224 POLR3GLQ9BT43 218 aa29.81■■■□□ 2.36
RNF4-205ENST00000504224 TIMELESSQ9UNS1 1208 aa29.81■■■□□ 2.36
RNF4-205ENST00000504224 CLSPNQ9HAW4 1339 aa29.8■■■□□ 2.36
RNF4-205ENST00000504224 MAP3K5Q99683 1374 aa29.79■■■□□ 2.36
RNF4-205ENST00000504224 LY75O60449 1722 aa29.79■■■□□ 2.36
RNF4-205ENST00000504224 QSER1Q2KHR3 1735 aa29.77■■■□□ 2.36
RNF4-205ENST00000504224 GPR162Q16538 588 aa29.76■■■□□ 2.35
RNF4-205ENST00000504224 MPRIPQ6WCQ1 1025 aa29.76■■■□□ 2.35
RNF4-205ENST00000504224 CYP27B1O15528 508 aa29.75■■■□□ 2.35
RNF4-205ENST00000504224 TUBGCP6Q96RT7 1819 aa29.75■■■□□ 2.35
RNF4-205ENST00000504224 PELP1Q8IZL8 1130 aaKnown RBP29.73■■■□□ 2.35
RNF4-205ENST00000504224 COL23A1Q86Y22 540 aaPredicted RBP29.72■■■□□ 2.35
RNF4-205ENST00000504224 ZNF784Q8NCA9 323 aaPredicted RBP29.72■■■□□ 2.35
RNF4-205ENST00000504224 PALLDQ8WX93 1383 aa29.72■■■□□ 2.35
RNF4-205ENST00000504224 MSL1Q68DK7 614 aa29.69■■■□□ 2.34
RNF4-205ENST00000504224 SPG7Q9UQ90 795 aa29.69■■■□□ 2.34
RNF4-205ENST00000504224 WASHC2AQ641Q2 1341 aa29.69■■■□□ 2.34
RNF4-205ENST00000504224 TNNT2P45379 298 aaPredicted RBP29.67■■■□□ 2.34
RNF4-205ENST00000504224 NLGN2Q8NFZ4 835 aa29.67■■■□□ 2.34
RNF4-205ENST00000504224 SMARCC1Q92922 1105 aaPredicted RBP29.67■■■□□ 2.34
RNF4-205ENST00000504224 HMGB2P26583 209 aaKnown RBP29.66■■■□□ 2.34
RNF4-205ENST00000504224 CCER1Q8TC90 406 aaPredicted RBP29.66■■■□□ 2.34
RNF4-205ENST00000504224 EYA1Q99502 592 aa29.66■■■□□ 2.34
RNF4-205ENST00000504224 POLKQ9UBT6 870 aa29.65■■■□□ 2.34
RNF4-205ENST00000504224 PIGBQ92521 554 aa29.64■■■□□ 2.34
RNF4-205ENST00000504224 COL24A1Q17RW2 1714 aa29.64■■■□□ 2.34
RNF4-205ENST00000504224 NCAPD2Q15021 1401 aa29.63■■■□□ 2.33
RNF4-205ENST00000504224 C5P01031 1676 aa29.63■■■□□ 2.33
RNF4-205ENST00000504224 PKD1L3Q7Z443 1732 aa29.62■■■□□ 2.33
RNF4-205ENST00000504224 FLAD1Q8NFF5 587 aa29.62■■■□□ 2.33
RNF4-205ENST00000504224 AK7Q96M32 723 aa29.62■■■□□ 2.33
RNF4-205ENST00000504224 TOGARAM1Q9Y4F4 1720 aa29.62■■■□□ 2.33
RNF4-205ENST00000504224 EIF4G2P78344 907 aaKnown RBP eCLIP29.61■■■□□ 2.33
RNF4-205ENST00000504224 NKX1-1Q15270 411 aaPredicted RBP29.61■■■□□ 2.33
RNF4-205ENST00000504224 ANKRD26Q9UPS8 1709 aa29.61■■■□□ 2.33
RNF4-205ENST00000504224 CHD4Q14839 1912 aa29.6■■■□□ 2.33
RNF4-205ENST00000504224 MAP2P11137 1827 aaKnown RBP29.59■■■□□ 2.33
RNF4-205ENST00000504224 UTRNP46939 3433 aa29.59■■■□□ 2.33
RNF4-205ENST00000504224 HSPA5P11021 654 aaKnown RBP29.59■■■□□ 2.33
RNF4-205ENST00000504224 TMOD3Q9NYL9 352 aa29.59■■■□□ 2.33
RNF4-205ENST00000504224 ITGB4P16144 1822 aa29.58■■■□□ 2.33
RNF4-205ENST00000504224 EIF4A2Q14240 407 aaKnown RBP29.58■■■□□ 2.33
RNF4-205ENST00000504224 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.58■■■□□ 2.33
RNF4-205ENST00000504224 PHF14O94880 888 aa29.57■■■□□ 2.32
RNF4-205ENST00000504224 IFNL2Q8IZJ0 200 aa29.57■■■□□ 2.32
RNF4-205ENST00000504224 PANK3Q9H999 370 aa29.56■■■□□ 2.32
RNF4-205ENST00000504224 PHKG2P15735 406 aa29.55■■■□□ 2.32
RNF4-205ENST00000504224 C4BP0C0L5 1744 aa29.54■■■□□ 2.32
RNF4-205ENST00000504224 LOC102724428A0A0B4J2F2 783 aa29.54■■■□□ 2.32
RNF4-205ENST00000504224 SIK1P57059 783 aa29.54■■■□□ 2.32
RNF4-205ENST00000504224 SMIM5Q71RC9 77 aa29.54■■■□□ 2.32
RNF4-205ENST00000504224 TAF1LQ8IZX4 1826 aa29.54■■■□□ 2.32
RNF4-205ENST00000504224 ASAP1Q9ULH1 1129 aa29.53■■■□□ 2.32
RNF4-205ENST00000504224 YBX3P16989 372 aaKnown RBP eCLIP29.52■■■□□ 2.32
RNF4-205ENST00000504224 AMIGO3Q86WK7 504 aa29.52■■■□□ 2.32
RNF4-205ENST00000504224 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.51■■■□□ 2.31
RNF4-205ENST00000504224 LINC00116Q8NCU8 138 aa29.51■■■□□ 2.31
RNF4-205ENST00000504224 GRIN3BO60391 1043 aa29.5■■■□□ 2.31
RNF4-205ENST00000504224 ATP6V1AP38606 617 aa29.49■■■□□ 2.31
RNF4-205ENST00000504224 CD2APQ9Y5K6 639 aa29.49■■■□□ 2.31
RNF4-205ENST00000504224 SSFA2P28290 1259 aa29.47■■■□□ 2.31
RNF4-205ENST00000504224 IGSF1Q8N6C5 1336 aa29.46■■■□□ 2.31
RNF4-205ENST00000504224 GNPATO15228 680 aa29.46■■■□□ 2.31
RNF4-205ENST00000504224 ITPK1Q13572 414 aa29.46■■■□□ 2.31
RNF4-205ENST00000504224 MORC1Q86VD1 984 aa29.46■■■□□ 2.31
RNF4-205ENST00000504224 ATG3Q9NT62 314 aa29.46■■■□□ 2.31
RNF4-205ENST00000504224 PLEKHO1Q53GL0 409 aaPredicted RBP29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms