RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 COBLO75128 1261 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 ADH1AP07327 375 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GPKOWQ92917 476 aaPredicted RBP eCLIP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GDF2Q9UK05 429 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 DIXDC1Q155Q3 683 aa6.3□□□□□ -1.4
HMGB3P17-201ENST00000504195 EDARADDQ8WWZ3 215 aa6.3□□□□□ -1.4
HMGB3P17-201ENST00000504195 PER1O15534 1290 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 HRCP23327 699 aa6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 GATA4P43694 442 aa6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 INTS6LQ5JSJ4 861 aaKnown RBP6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 PTGIRP43119 386 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 RSBN1LQ6PCB5 846 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 ARHGAP9Q9BRR9 750 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 GOLGA6L1Q8N7Z2 621 aa6.27□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
HMGB3P17-201ENST00000504195 RNF144AP50876 292 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 LINC00114Q6XXX2 140 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 ZBTB33Q86T24 672 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 ZNF784Q8NCA9 323 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 PHF24Q9UPV7 400 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 PCDHB15Q9Y5E8 787 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 TTLL12Q14166 644 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 KLRG1Q96E93 195 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 TMPRSS4Q9NRS4 437 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 RAB15P59190 212 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 CSPP1Q1MSJ5 1256 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 NBPF20Q3BBV1 942 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 HELBQ8NG08 1087 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 CABLES1Q8TDN4 633 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 TRIM52Q96A61 297 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 TBC1D2Q9BYX2 928 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 RSPO4Q2I0M5 234 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 BEGAINQ9BUH8 593 aa6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 CFHR5Q9BXR6 569 aa6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 GPC1P35052 558 aa6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 MEN1O00255 615 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 LRP8Q14114 963 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 SLC27A3Q5K4L6 730 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 PDXDC2PQ6P474 469 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 SLCO4C1Q6ZQN7 724 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 DYRK3O43781 588 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 BMP4P12644 408 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 HOXB4P17483 251 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 DGKGP49619 791 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 POU4F2Q12837 409 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 GIGYF2Q6Y7W6 1299 aaKnown RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 RIC3Q7Z5B4 369 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 KDF1Q8NAX2 398 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 LILRA1O75019 489 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 F11P03951 625 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 TIMMDC1Q9NPL8 285 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 ERVH48-1M5A8F1 160 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 PAX4O43316 350 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 TXKP42681 527 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 AMHR2Q16671 573 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 PRSS36Q5K4E3 855 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 NLRP3Q96P20 1036 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 MCTP1Q6DN14 999 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 CYLDQ9NQC7 956 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 EPXP11678 715 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 PTK2Q05397 1052 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 GPAMQ9HCL2 828 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 FKBPLQ9UIM3 349 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 APBA3O96018 575 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 TUSC1Q2TAM9 212 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 WDR44Q5JSH3 913 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 TAS1R3Q7RTX0 852 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 RNF135Q8IUD6 432 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 ZC3H4Q9UPT8 1303 aaKnown RBP6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 WASLO00401 505 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 PLCB2Q00722 1185 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 CHSY3Q70JA7 882 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 ATXN7L1Q9ULK2 861 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 CSB-PGBD3P0DP91 1061 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 QPCTQ16769 361 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 PRRT3Q5FWE3 981 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms