RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 COBLO75128 1261 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 ADH1AP07327 375 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GPKOWQ92917 476 aaPredicted RBP eCLIP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GAS2L1Q99501 681 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 SUV39H2Q9H5I1 410 aa6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 GDF2Q9UK05 429 aaPredicted RBP6.31□□□□□ -1.4
HMGB3P17-201ENST00000504195 DIXDC1Q155Q3 683 aa6.3□□□□□ -1.4
HMGB3P17-201ENST00000504195 EDARADDQ8WWZ3 215 aa6.3□□□□□ -1.4
HMGB3P17-201ENST00000504195 PER1O15534 1290 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 HRCP23327 699 aa6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 GATA4P43694 442 aa6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 INTS6LQ5JSJ4 861 aaKnown RBP6.29□□□□□ -1.4
HMGB3P17-201ENST00000504195 PTGIRP43119 386 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 RSBN1LQ6PCB5 846 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 ARHGAP9Q9BRR9 750 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
HMGB3P17-201ENST00000504195 GOLGA6L1Q8N7Z2 621 aa6.27□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUCKS1Q9H1E3 243 aaKnown RBP6.27□□□□□ -1.41
HMGB3P17-201ENST00000504195 RNF144AP50876 292 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 FOXD4L6Q3SYB3 417 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 FOXD4L3Q6VB84 417 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 LINC00114Q6XXX2 140 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 ZBTB33Q86T24 672 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 ZNF784Q8NCA9 323 aaPredicted RBP6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 PHF24Q9UPV7 400 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 PCDHB15Q9Y5E8 787 aa6.26□□□□□ -1.41
HMGB3P17-201ENST00000504195 TTLL12Q14166 644 aaPredicted RBP6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 KLRG1Q96E93 195 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 TMPRSS4Q9NRS4 437 aa6.25□□□□□ -1.41
HMGB3P17-201ENST00000504195 RAB15P59190 212 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 CSPP1Q1MSJ5 1256 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 NBPF20Q3BBV1 942 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 HELBQ8NG08 1087 aaPredicted RBP6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 CABLES1Q8TDN4 633 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 TRIM52Q96A61 297 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 TBC1D2Q9BYX2 928 aa6.24□□□□□ -1.41
HMGB3P17-201ENST00000504195 RSPO4Q2I0M5 234 aaPredicted RBP6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 BEGAINQ9BUH8 593 aa6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 CFHR5Q9BXR6 569 aa6.23□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2BA6NNL0 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2EB1AL46 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 GPC1P35052 558 aa6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2DQ5VT03 806 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 NUTM2AQ8IVF1 878 aaPredicted RBP6.22□□□□□ -1.41
HMGB3P17-201ENST00000504195 MEN1O00255 615 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 LRP8Q14114 963 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 SLC27A3Q5K4L6 730 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 PDXDC2PQ6P474 469 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 SLCO4C1Q6ZQN7 724 aa6.21□□□□□ -1.42
HMGB3P17-201ENST00000504195 DYRK3O43781 588 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 BMP4P12644 408 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 LCE1DQ5T752 114 aa6.2□□□□□ -1.42
HMGB3P17-201ENST00000504195 HOXB4P17483 251 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 ADD1P35611 737 aaKnown RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 DGKGP49619 791 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 POU4F2Q12837 409 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 NKAPLQ5M9Q1 402 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 GIGYF2Q6Y7W6 1299 aaKnown RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 RIC3Q7Z5B4 369 aa6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 KDF1Q8NAX2 398 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P17-201ENST00000504195 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 LILRA1O75019 489 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 F11P03951 625 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 SPATA31C1P0DKV0 1188 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 TIMMDC1Q9NPL8 285 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 GGA1Q9UJY5 639 aa6.18□□□□□ -1.42
HMGB3P17-201ENST00000504195 ERVH48-1M5A8F1 160 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 PAX4O43316 350 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 TXKP42681 527 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 AMHR2Q16671 573 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 PRSS36Q5K4E3 855 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 BTBD6Q96KE9 485 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 NLRP3Q96P20 1036 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 TPSG1Q9NRR2 321 aa6.17□□□□□ -1.42
HMGB3P17-201ENST00000504195 MCTP1Q6DN14 999 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 CYLDQ9NQC7 956 aa6.16□□□□□ -1.42
HMGB3P17-201ENST00000504195 EPXP11678 715 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 PTK2Q05397 1052 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 GPAMQ9HCL2 828 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 FKBPLQ9UIM3 349 aa6.15□□□□□ -1.42
HMGB3P17-201ENST00000504195 APBA3O96018 575 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 TUSC1Q2TAM9 212 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 WDR44Q5JSH3 913 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 TAS1R3Q7RTX0 852 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 RNF135Q8IUD6 432 aa6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 ZC3H4Q9UPT8 1303 aaKnown RBP6.14□□□□□ -1.43
HMGB3P17-201ENST00000504195 WASLO00401 505 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 PLCB2Q00722 1185 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 CHSY3Q70JA7 882 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 ATXN7L1Q9ULK2 861 aaPredicted RBP6.13□□□□□ -1.43
HMGB3P17-201ENST00000504195 SPDYE3A6NKU9 549 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 CSB-PGBD3P0DP91 1061 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 QPCTQ16769 361 aa6.12□□□□□ -1.43
HMGB3P17-201ENST00000504195 PRRT3Q5FWE3 981 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms