RNA–Protein interactions for RNA: ENST00000503868.5

PTCD2-207, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-207ENST00000503868 LARP1Q6PKG0 1096 aaKnown RBP17.66■□□□□ 0.42
PTCD2-207ENST00000503868 TOM1L2Q6ZVM7 507 aa17.66■□□□□ 0.42
PTCD2-207ENST00000503868 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
PTCD2-207ENST00000503868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.426e-7■■□□□ 12.6
PTCD2-207ENST00000503868 RCAN3Q9UKA8 241 aa17.66■□□□□ 0.42
PTCD2-207ENST00000503868 CRB1P82279 1406 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 MAP3K5Q99683 1374 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 FANCIQ9NVI1 1328 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 MCM10Q7L590 875 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 STRN4Q9NRL3 753 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 IFT57Q9NWB7 429 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 PKD1L3Q7Z443 1732 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 LRRC37A3O60309 1634 aa17.65■□□□□ 0.42
PTCD2-207ENST00000503868 ADAMTS2O95450 1211 aa17.64■□□□□ 0.42
PTCD2-207ENST00000503868 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.42
PTCD2-207ENST00000503868 HSPA1LP34931 641 aa17.64■□□□□ 0.42
PTCD2-207ENST00000503868 GNAI1P63096 354 aa17.64■□□□□ 0.42
PTCD2-207ENST00000503868 RTF1Q92541 710 aaKnown RBP17.64■□□□□ 0.42
PTCD2-207ENST00000503868 CFAP44Q96MT7 982 aa17.64■□□□□ 0.42
PTCD2-207ENST00000503868 NRAPQ86VF7 1730 aa17.64■□□□□ 0.42
PTCD2-207ENST00000503868 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
PTCD2-207ENST00000503868 NUTM2BA6NNL0 878 aaPredicted RBP17.64■□□□□ 0.41
PTCD2-207ENST00000503868 NUTM2EB1AL46 878 aaPredicted RBP17.64■□□□□ 0.41
PTCD2-207ENST00000503868 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.41
PTCD2-207ENST00000503868 NUTM2AQ8IVF1 878 aaPredicted RBP17.64■□□□□ 0.41
PTCD2-207ENST00000503868 IL17REQ8NFR9 667 aa17.64■□□□□ 0.41
PTCD2-207ENST00000503868 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
PTCD2-207ENST00000503868 GTF3C3Q9Y5Q9 886 aa17.64■□□□□ 0.41
PTCD2-207ENST00000503868 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
PTCD2-207ENST00000503868 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
PTCD2-207ENST00000503868 SPATA31A6Q5VVP1 1343 aa17.63■□□□□ 0.41
PTCD2-207ENST00000503868 SLIT2O94813 1529 aa17.62■□□□□ 0.41
PTCD2-207ENST00000503868 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
PTCD2-207ENST00000503868 ADAMTS7Q9UKP4 1686 aa17.62■□□□□ 0.41
PTCD2-207ENST00000503868 OVOS2A0A0G2JMS6 1433 aa17.62■□□□□ 0.41
PTCD2-207ENST00000503868 CEMIPQ8WUJ3 1361 aa17.62■□□□□ 0.41
PTCD2-207ENST00000503868 CHL1O00533 1208 aa17.61■□□□□ 0.41
PTCD2-207ENST00000503868 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
PTCD2-207ENST00000503868 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
PTCD2-207ENST00000503868 MBIPQ9NS73 344 aa17.6■□□□□ 0.41
PTCD2-207ENST00000503868 CT47B1P0C2W7 299 aaPredicted RBP17.59■□□□□ 0.41
PTCD2-207ENST00000503868 LAS1LQ9Y4W2 734 aaKnown RBP17.59■□□□□ 0.41
PTCD2-207ENST00000503868 LRP6O75581 1613 aa17.59■□□□□ 0.41
PTCD2-207ENST00000503868 IL2RBP14784 551 aa17.58■□□□□ 0.41
PTCD2-207ENST00000503868 C1orf141Q5JVX7 400 aa17.58■□□□□ 0.41
PTCD2-207ENST00000503868 LGR6Q9HBX8 967 aa17.58■□□□□ 0.41
PTCD2-207ENST00000503868 PHKG2P15735 406 aa17.58■□□□□ 0.4
PTCD2-207ENST00000503868 SHANK3Q9BYB0 1731 aa17.57■□□□□ 0.4
PTCD2-207ENST00000503868 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
PTCD2-207ENST00000503868 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
PTCD2-207ENST00000503868 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
PTCD2-207ENST00000503868 WNK3Q9BYP7 1800 aa17.57■□□□□ 0.4
PTCD2-207ENST00000503868 DISP2A7MBM2 1401 aa17.56■□□□□ 0.4
PTCD2-207ENST00000503868 CYP27B1O15528 508 aa17.56■□□□□ 0.4
PTCD2-207ENST00000503868 RNMTO43148 476 aaKnown RBP17.56■□□□□ 0.4
PTCD2-207ENST00000503868 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
PTCD2-207ENST00000503868 RRP1P56182 461 aaKnown RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 FNBP4Q8N3X1 1017 aaPredicted RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 ZCRB1Q8TBF4 217 aaKnown RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 SIPA1L3O60292 1781 aaPredicted RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 RARSP54136 660 aaKnown RBP17.55■□□□□ 0.4
PTCD2-207ENST00000503868 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
PTCD2-207ENST00000503868 SPATA31A1Q5TZJ5 1347 aa17.54■□□□□ 0.4
PTCD2-207ENST00000503868 BCL9LQ86UU0 1499 aa17.54■□□□□ 0.4
PTCD2-207ENST00000503868 UNC5CLQ8IV45 518 aa17.54■□□□□ 0.4
PTCD2-207ENST00000503868 THRAP3Q9Y2W1 955 aaKnown RBP17.54■□□□□ 0.4
PTCD2-207ENST00000503868 KDM6AO15550 1401 aaPredicted RBP17.53■□□□□ 0.4
PTCD2-207ENST00000503868 VAMP4O75379 141 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 NEFLP07196 543 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 SPATA31A5Q5VU36 1347 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 SPATA31A7Q8IWB4 1347 aa17.53■□□□□ 0.4
PTCD2-207ENST00000503868 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.53■□□□□ 0.4
PTCD2-207ENST00000503868 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 BCAR3O75815 825 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 FKBP8Q14318 412 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 TSPYL4Q9UJ04 414 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 PCDH11XQ9BZA7 1347 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 PCDH11YQ9BZA8 1340 aa17.52■□□□□ 0.4
PTCD2-207ENST00000503868 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.39
PTCD2-207ENST00000503868 TSPYL6Q8N831 410 aa17.52■□□□□ 0.39
PTCD2-207ENST00000503868 C8orf58Q8NAV2 365 aa17.52■□□□□ 0.39
PTCD2-207ENST00000503868 ZNF428Q96B54 188 aa17.52■□□□□ 0.39
PTCD2-207ENST00000503868 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
PTCD2-207ENST00000503868 DCAF5Q96JK2 942 aa17.51■□□□□ 0.39
PTCD2-207ENST00000503868 TEFQ10587 303 aa17.5■□□□□ 0.39
PTCD2-207ENST00000503868 VPS72Q15906 364 aa17.49■□□□□ 0.39
PTCD2-207ENST00000503868 TWISTNBQ3B726 338 aaPredicted RBP17.49■□□□□ 0.39
PTCD2-207ENST00000503868 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
PTCD2-207ENST00000503868 MRC1P22897 1456 aa17.49■□□□□ 0.39
PTCD2-207ENST00000503868 PLIN1O60240 522 aa17.48■□□□□ 0.39
PTCD2-207ENST00000503868 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
PTCD2-207ENST00000503868 ALDH1L2Q3SY69 923 aa17.48■□□□□ 0.39
PTCD2-207ENST00000503868 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
PTCD2-207ENST00000503868 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
PTCD2-207ENST00000503868 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
PTCD2-207ENST00000503868 ELL2O00472 640 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms